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The map label for this gene is int [H]

Identifier: 169628813

GI number: 169628813

Start: 1754551

End: 1755801

Strand: Direct

Name: int [H]

Synonym: MAB_1723

Alternate gene names: 169628813

Gene position: 1754551-1755801 (Clockwise)

Preceding gene: 169628812

Following gene: 169628816

Centisome position: 34.63

GC content: 60.51

Gene sequence:

>1251_bases
ATGGAGCAAACGGAGCGAGTAAAGAAGCGCCCCGCCTGTAAGTGCAAGCACGTCTACTTCGCACACCCCAATGAGGGCCC
ATGCAATCAATGCGGCGACTGCCCGAAGTATCGCGAACGTGAGCGGCGTGAGCGCGGCGAGGGCGGCCTCTTCCAACGTG
CCGACGGGATGTGGGTCGGGTCGGTGGAAGTCCCCTCCGAAGATGGATTGCGCCGCCGCCAGACTGTATCCGCGAAAGAC
AAGGGTGTGGCGCTGGACAAACTGCGAGACCTGCGGAGCGCCATCCGATCCGGTAAATCCCCAACCTCATCGAAGGTTCA
CCTCGAACAGTGGCTTAACCACTGGCTCGAAACCATCCAGAAGCCCCGCGTCCGGCCAACGACCTATAAGTACTACGAGA
CCACTGTTCGGCTGTACATTCTCCCATTCATTGATGGACGCACACAGCTAGGCAAGCTCACCCCAGCGCAAGTGCGCAAG
ATGATCGCCAAGAACGGAACACGTAACGCACAGAAGGCCCACCAAACCCTCGTCAAAGCATTGGGTGATGCGATGGACGA
AGGCATGCTGGACAAGAACGTTGCCGCAGTTGTCGACAAACCCAAGCATGTCGCCATCGAGCGCCAGCCATTCACGTTCG
ATGAGGCCCGCCAGATCATCGCCACCGCGATCAAACGCAACGACCCATGGGCCACGATGTGGGCGGCCATGTTCTTCACC
GGGGCCCGCCAAGGCGAGATCATCGGCATGGAATGGGACCGCTGCGACCTTGAGAAAGGACTGTTCGACTTCTCCTGGCA
GCTCCAACAACTCCCGCCCGAACTCCCCAGAGGATTCAAGCACCGCCCCTGCCATCTCTCCCTGGCGTGGACGAAGCCGA
AGACGAAAGCCGGTGCCCGCGTGGCCCCCATGACTAAACCGCTACAGGCGATCATGGAGGCGTACGCCAAAACGGACACG
GGTCCGAATCCACATGGGCTTGTGTGGCGCCACCCGGACGGACACCCGATCTCACCGACAGATGCATCCGATGCGTGGCG
CGCGCTAGTGAAAGCCGCCGACGTCCCATACCGATCGATGCACTCAGCGCGGCATACAACCGCCACTCTGCTCAACAATG
CTGGCGTCAGCCAGGAGACCCGCATGAAGGTAGTCGGCCATTCATCGGCGGTGGCCCAGCAGATCTACGTACACGTCGAC
CACGAACCTGCCAGGGCAGCGCTTTCTAACCTCAACGAGCTGCTGAGCTAA

Upstream 100 bases:

>100_bases
AATCGCCTGGCAGAAGCCATATTGACGAAGTGTGCTAGGCCATGATGGGCCCTACGTAGGCTACAGTGTAGGCTACAGTG
GCGGACGAAGGAGTTTGCTG

Downstream 100 bases:

>100_bases
GGGCAGTTCGGGTAGATGGACATTGCGGTGCGTACGAACTCCACAGCCTGATCCAGAGGAGTATTCGTCTCCGCGCTGAG
GGACTGCTGTACGAACTGCA

Product: putative phage integrase

Products: NA

Alternate protein names: Recombinase [H]

Number of amino acids: Translated: 416; Mature: 416

Protein sequence:

>416_residues
MEQTERVKKRPACKCKHVYFAHPNEGPCNQCGDCPKYRERERRERGEGGLFQRADGMWVGSVEVPSEDGLRRRQTVSAKD
KGVALDKLRDLRSAIRSGKSPTSSKVHLEQWLNHWLETIQKPRVRPTTYKYYETTVRLYILPFIDGRTQLGKLTPAQVRK
MIAKNGTRNAQKAHQTLVKALGDAMDEGMLDKNVAAVVDKPKHVAIERQPFTFDEARQIIATAIKRNDPWATMWAAMFFT
GARQGEIIGMEWDRCDLEKGLFDFSWQLQQLPPELPRGFKHRPCHLSLAWTKPKTKAGARVAPMTKPLQAIMEAYAKTDT
GPNPHGLVWRHPDGHPISPTDASDAWRALVKAADVPYRSMHSARHTTATLLNNAGVSQETRMKVVGHSSAVAQQIYVHVD
HEPARAALSNLNELLS

Sequences:

>Translated_416_residues
MEQTERVKKRPACKCKHVYFAHPNEGPCNQCGDCPKYRERERRERGEGGLFQRADGMWVGSVEVPSEDGLRRRQTVSAKD
KGVALDKLRDLRSAIRSGKSPTSSKVHLEQWLNHWLETIQKPRVRPTTYKYYETTVRLYILPFIDGRTQLGKLTPAQVRK
MIAKNGTRNAQKAHQTLVKALGDAMDEGMLDKNVAAVVDKPKHVAIERQPFTFDEARQIIATAIKRNDPWATMWAAMFFT
GARQGEIIGMEWDRCDLEKGLFDFSWQLQQLPPELPRGFKHRPCHLSLAWTKPKTKAGARVAPMTKPLQAIMEAYAKTDT
GPNPHGLVWRHPDGHPISPTDASDAWRALVKAADVPYRSMHSARHTTATLLNNAGVSQETRMKVVGHSSAVAQQIYVHVD
HEPARAALSNLNELLS
>Mature_416_residues
MEQTERVKKRPACKCKHVYFAHPNEGPCNQCGDCPKYRERERRERGEGGLFQRADGMWVGSVEVPSEDGLRRRQTVSAKD
KGVALDKLRDLRSAIRSGKSPTSSKVHLEQWLNHWLETIQKPRVRPTTYKYYETTVRLYILPFIDGRTQLGKLTPAQVRK
MIAKNGTRNAQKAHQTLVKALGDAMDEGMLDKNVAAVVDKPKHVAIERQPFTFDEARQIIATAIKRNDPWATMWAAMFFT
GARQGEIIGMEWDRCDLEKGLFDFSWQLQQLPPELPRGFKHRPCHLSLAWTKPKTKAGARVAPMTKPLQAIMEAYAKTDT
GPNPHGLVWRHPDGHPISPTDASDAWRALVKAADVPYRSMHSARHTTATLLNNAGVSQETRMKVVGHSSAVAQQIYVHVD
HEPARAALSNLNELLS

Specific function: Is a recombinase (or integrase), catalyzing the cutting and rejoining of the recombining DNA molecules [H]

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104
- InterPro:   IPR023109 [H]

Pfam domain/function: PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 46944; Mature: 46944

Theoretical pI: Translated: 10.20; Mature: 10.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQTERVKKRPACKCKHVYFAHPNEGPCNQCGDCPKYRERERRERGEGGLFQRADGMWVG
CCHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCEECCCCCEEE
SVEVPSEDGLRRRQTVSAKDKGVALDKLRDLRSAIRSGKSPTSSKVHLEQWLNHWLETIQ
EEECCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
KPRVRPTTYKYYETTVRLYILPFIDGRTQLGKLTPAQVRKMIAKNGTRNAQKAHQTLVKA
CCCCCCCEEHEEEEEEEEEEEEEECCCHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHH
LGDAMDEGMLDKNVAAVVDKPKHVAIERQPFTFDEARQIIATAIKRNDPWATMWAAMFFT
HHHHHHCCCCCCCHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHH
GARQGEIIGMEWDRCDLEKGLFDFSWQLQQLPPELPRGFKHRPCHLSLAWTKPKTKAGAR
CCCCCCEEECCCCHHHHHCCHHHHHHHHHHCCHHHCCCCCCCCEEEEEEECCCCCCCCCC
VAPMTKPLQAIMEAYAKTDTGPNPHGLVWRHPDGHPISPTDASDAWRALVKAADVPYRSM
CCCCHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCHHHH
HSARHTTATLLNNAGVSQETRMKVVGHSSAVAQQIYVHVDHEPARAALSNLNELLS
HHHHHHHHHHHHCCCCCHHHHHEECCCHHHHHEEEEEEECCCHHHHHHHHHHHHHC
>Mature Secondary Structure
MEQTERVKKRPACKCKHVYFAHPNEGPCNQCGDCPKYRERERRERGEGGLFQRADGMWVG
CCHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCEECCCCCEEE
SVEVPSEDGLRRRQTVSAKDKGVALDKLRDLRSAIRSGKSPTSSKVHLEQWLNHWLETIQ
EEECCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
KPRVRPTTYKYYETTVRLYILPFIDGRTQLGKLTPAQVRKMIAKNGTRNAQKAHQTLVKA
CCCCCCCEEHEEEEEEEEEEEEEECCCHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHH
LGDAMDEGMLDKNVAAVVDKPKHVAIERQPFTFDEARQIIATAIKRNDPWATMWAAMFFT
HHHHHHCCCCCCCHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHH
GARQGEIIGMEWDRCDLEKGLFDFSWQLQQLPPELPRGFKHRPCHLSLAWTKPKTKAGAR
CCCCCCEEECCCCHHHHHCCHHHHHHHHHHCCHHHCCCCCCCCEEEEEEECCCCCCCCCC
VAPMTKPLQAIMEAYAKTDTGPNPHGLVWRHPDGHPISPTDASDAWRALVKAADVPYRSM
CCCCHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCHHHH
HSARHTTATLLNNAGVSQETRMKVVGHSSAVAQQIYVHVDHEPARAALSNLNELLS
HHHHHHHHHHHHCCCCCHHHHHEECCCHHHHHEEEEEEECCCHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2180909 [H]