Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
---|---|
Accession | NC_010397 |
Length | 5,067,172 |
Click here to switch to the map view.
The map label for this gene is 169628791
Identifier: 169628791
GI number: 169628791
Start: 1727947
End: 1728843
Strand: Direct
Name: 169628791
Synonym: MAB_1701
Alternate gene names: NA
Gene position: 1727947-1728843 (Clockwise)
Preceding gene: 169628790
Following gene: 169628792
Centisome position: 34.1
GC content: 66.89
Gene sequence:
>897_bases ATGCCGGCCAACAATTCGCAACCGCGCCCGTTGTCGGCCGCCAGCCGCGCCGTGCACACCCGCCGCATCGCGTTCACCTT CGATCGGTCCGCGCCCTCGCGGCGGCACTTCATGGCCGGCGATATCGCCATGAGTCATCTGGTGGCGCTGTTGTCGGGGT TCTTCCCGTCCGGGGAAGAGTTCTTCATCCAGTCGGTGCGGCGCTACGACCGGCAGATCCTCGACCCGGTGCTCAAAAAG CAGGTCGCGGGCTTCATCGGGCAGGAGATGACGCACGGAATGCAGCACCGCGAACTGAACACCCAGCTGGTGCGTCGTGG CTACTGGGCGACCGGGCTCATGGATCGCGTGGGCACCCGACTGGTCAAGCGCATGAAACAGCACCGGGAGCGGATGCCGG ATACCGTCGCCCGGGCGGCGCTTGCCGTCACCGCGGGGGTGGAGCACCTCACCGCGATTCTCGGGGAACAAGTGCTCAGC GTGCCCTGGATACAGCAGCAGCTGACCGACCCCGAGGTGCGCGCGATGCTGAACTGGCATGCCATCGAGGAGATGGAACA CAAGTCGGTGGCCTTCGACGTGTACCGGTACGTCGGCGGGACCGAGCGGATGCGTATCGCGGCGATGGTTCTCACGCTGG GGCTCTTCCTGACCCGGACGGTGATCCTGCTGGCCTCGATCGTCACCGATCCGTGGGCCTGGCGCCGCCCCGCGCGGACC CTGCGCAGCCTGGCAACCCTGCCGCGCACCCCGCTGTTCGCGGGGCTGGGAGCTAAGATTCGCTGCTACCTGCGGCCCGG CTTCCATCCCGACGACATCGACCATGGCCCTTTGCTCGAGAAGTGGCGCGAGGAGTACTTCGGTCCCGAGGGCACCCTGC TGGACCATCTGAAGTAG
Upstream 100 bases:
>100_bases CGACCTGGGCGCCAGGTCCGACCCGACGCCGCCGGGCCGCTACACCATCCCGACGCCCTACGGTGGGCCGGCGCTGCCCA TCGAGCCACCGAGGTAGATG
Downstream 100 bases:
>100_bases TTGCCGCAAGGCGACCGAGGTAGAAAGCGTTTTGTCCGGCCCTTAGGCTGTCCAGGTCAATTACTGCTGTCTTGTGGACC TCAAGAGGAGCCTGAGCGAA
Product: hypothetical protein
Products: NA
Alternate protein names: Metal-Dependent Hydrolase-Like Protein; FF Domain-Containing Protein; FF Domain Protein; Conserved Protein UCP; Metal-Dependent Hydrolase-Like; Phthalate 4 5-Dioxygenase; Metal Hydrolase
Number of amino acids: Translated: 298; Mature: 297
Protein sequence:
>298_residues MPANNSQPRPLSAASRAVHTRRIAFTFDRSAPSRRHFMAGDIAMSHLVALLSGFFPSGEEFFIQSVRRYDRQILDPVLKK QVAGFIGQEMTHGMQHRELNTQLVRRGYWATGLMDRVGTRLVKRMKQHRERMPDTVARAALAVTAGVEHLTAILGEQVLS VPWIQQQLTDPEVRAMLNWHAIEEMEHKSVAFDVYRYVGGTERMRIAAMVLTLGLFLTRTVILLASIVTDPWAWRRPART LRSLATLPRTPLFAGLGAKIRCYLRPGFHPDDIDHGPLLEKWREEYFGPEGTLLDHLK
Sequences:
>Translated_298_residues MPANNSQPRPLSAASRAVHTRRIAFTFDRSAPSRRHFMAGDIAMSHLVALLSGFFPSGEEFFIQSVRRYDRQILDPVLKK QVAGFIGQEMTHGMQHRELNTQLVRRGYWATGLMDRVGTRLVKRMKQHRERMPDTVARAALAVTAGVEHLTAILGEQVLS VPWIQQQLTDPEVRAMLNWHAIEEMEHKSVAFDVYRYVGGTERMRIAAMVLTLGLFLTRTVILLASIVTDPWAWRRPART LRSLATLPRTPLFAGLGAKIRCYLRPGFHPDDIDHGPLLEKWREEYFGPEGTLLDHLK >Mature_297_residues PANNSQPRPLSAASRAVHTRRIAFTFDRSAPSRRHFMAGDIAMSHLVALLSGFFPSGEEFFIQSVRRYDRQILDPVLKKQ VAGFIGQEMTHGMQHRELNTQLVRRGYWATGLMDRVGTRLVKRMKQHRERMPDTVARAALAVTAGVEHLTAILGEQVLSV PWIQQQLTDPEVRAMLNWHAIEEMEHKSVAFDVYRYVGGTERMRIAAMVLTLGLFLTRTVILLASIVTDPWAWRRPARTL RSLATLPRTPLFAGLGAKIRCYLRPGFHPDDIDHGPLLEKWREEYFGPEGTLLDHLK
Specific function: Unknown
COG id: COG3687
COG function: function code R; Predicted metal-dependent hydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33954; Mature: 33823
Theoretical pI: Translated: 10.72; Mature: 10.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPANNSQPRPLSAASRAVHTRRIAFTFDRSAPSRRHFMAGDIAMSHLVALLSGFFPSGEE CCCCCCCCCCHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHH FFIQSVRRYDRQILDPVLKKQVAGFIGQEMTHGMQHRELNTQLVRRGYWATGLMDRVGTR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH LVKRMKQHRERMPDTVARAALAVTAGVEHLTAILGEQVLSVPWIQQQLTDPEVRAMLNWH HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCHHHHHHHHHH AIEEMEHKSVAFDVYRYVGGTERMRIAAMVLTLGLFLTRTVILLASIVTDPWAWRRPART HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH LRSLATLPRTPLFAGLGAKIRCYLRPGFHPDDIDHGPLLEKWREEYFGPEGTLLDHLK HHHHHHCCCCCHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCHHCCCC >Mature Secondary Structure PANNSQPRPLSAASRAVHTRRIAFTFDRSAPSRRHFMAGDIAMSHLVALLSGFFPSGEE CCCCCCCCCHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHH FFIQSVRRYDRQILDPVLKKQVAGFIGQEMTHGMQHRELNTQLVRRGYWATGLMDRVGTR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH LVKRMKQHRERMPDTVARAALAVTAGVEHLTAILGEQVLSVPWIQQQLTDPEVRAMLNWH HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCHHHHHHHHHH AIEEMEHKSVAFDVYRYVGGTERMRIAAMVLTLGLFLTRTVILLASIVTDPWAWRRPART HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH LRSLATLPRTPLFAGLGAKIRCYLRPGFHPDDIDHGPLLEKWREEYFGPEGTLLDHLK HHHHHHCCCCCHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA