Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
---|---|
Accession | NC_010397 |
Length | 5,067,172 |
Click here to switch to the map view.
The map label for this gene is 169628790
Identifier: 169628790
GI number: 169628790
Start: 1726744
End: 1727943
Strand: Direct
Name: 169628790
Synonym: MAB_1700
Alternate gene names: NA
Gene position: 1726744-1727943 (Clockwise)
Preceding gene: 169628789
Following gene: 169628791
Centisome position: 34.08
GC content: 68.08
Gene sequence:
>1200_bases ATGAGCCGCGCCTGGGCCAGCGGCCTGTCTCTCGTTTTCCTGCTGGTGGTTTCAGTCACCTACCTGTTGGTGGGCGTGCT GCACGTGCGGCCATTGGCGTCGAGCTATCCGCTGACCATCCAACTTGCCGAATCCGGCGGACTGCTGCCCAACCAGGACG TGACGCTGCACGGGGTACGGATCGGCTCGGTCGACTCATTGACCTTCACCGGAACCGGTGTCAACGCGGTCGTGAACGTC GACGGCGGTGTGCGGGTGCCCGCGTCCGCGGTGGTGCGGGTTTCGGGGCTGTCGCCGGCCGGCGAGCAGTACCTCGACTT CTCGGCGGGATCGGACACCGGTCCGTTCCTGACCGCGGGTGACGTGATCACCCGGGATCGCACCGACATCCCGGTGACCC CGGCGCAGCTGCTGTCCCACGCCGATGGTGTGCTGGCACAAGTAGATCCGTCGAAGATCGAGCGCATCAAGAAGGAACTG AGCCTGAGCGCCGCGGGGCCGCGCAAGCTCACCGACATCGTCGACGGCGGGGTGTTCTTGTTGGCCACCCTGGATTCGGT TCTGCCCGAGACGGTTAGCGCCATCAAGGACAGCCGCACGGTGTTGTCGGCGGCGGTCGATGTCAACGGGGGCATCGCGG CCACCGCACGCAATCTGCGCGGCACTCTCACGGGTATCAATGCCATGGACGGGGGCTACCGCACACTCATCGGCCAGGCT CCGCAGGTTCTGCACGCCGCCGACAAGCTTTTCGACGACAACTCCGACACCATGGTGCAGCTGCTGGCCAACCTGGCCGT GAACGCGCGGCTGTCCTATGTGCGGGTGCCGGCGCTGAACGCCTTGTTCCCCAACTACCGCGGTTCGGCGCTGGAGGCGT TCATCAGCACCATGCATGACTACGGGCTATGGGTGACCGCCGACCTGTATCCGCGGTATGCCTGCGATTACGGCACCCCG CGGCACCCACCCTCGGCGGCCGACTACCCGGAGCCGTTCCTGTATACGTACTGCCGCGACGACGATCCCGCCATCCTGGT GCGCGGCGCCAAGAACGCCCCGCGCCCGGCGGGGGACGACACCGCCGGGCCGCCGCCCGGCGCCGACCTGGGCGCCAGGT CCGACCCGACGCCGCCGGGCCGCTACACCATCCCGACGCCCTACGGTGGGCCGGCGCTGCCCATCGAGCCACCGAGGTAG
Upstream 100 bases:
>100_bases AGTTCGTCGGGACCATCAAGTACTCGTTGTGGCGGCTACAAGAACGCGTCGTCGGGCAGGGGCCCGCAGCGCAGGGCTTC GGTGTGCAAGGCCCCACCCG
Downstream 100 bases:
>100_bases ATGATGCCGGCCAACAATTCGCAACCGCGCCCGTTGTCGGCCGCCAGCCGCGCCGTGCACACCCGCCGCATCGCGTTCAC CTTCGATCGGTCCGCGCCCT
Product: putative Mce family protein
Products: NA
Alternate protein names: Mce Family Protein; MCE Family Protein; Mce Family F; Secreted Protein; Mce Related Protein; MCE-Family Protein; Mce-Related Protein; MCE-Family; MCE-Family F; Mce-Family F
Number of amino acids: Translated: 399; Mature: 398
Protein sequence:
>399_residues MSRAWASGLSLVFLLVVSVTYLLVGVLHVRPLASSYPLTIQLAESGGLLPNQDVTLHGVRIGSVDSLTFTGTGVNAVVNV DGGVRVPASAVVRVSGLSPAGEQYLDFSAGSDTGPFLTAGDVITRDRTDIPVTPAQLLSHADGVLAQVDPSKIERIKKEL SLSAAGPRKLTDIVDGGVFLLATLDSVLPETVSAIKDSRTVLSAAVDVNGGIAATARNLRGTLTGINAMDGGYRTLIGQA PQVLHAADKLFDDNSDTMVQLLANLAVNARLSYVRVPALNALFPNYRGSALEAFISTMHDYGLWVTADLYPRYACDYGTP RHPPSAADYPEPFLYTYCRDDDPAILVRGAKNAPRPAGDDTAGPPPGADLGARSDPTPPGRYTIPTPYGGPALPIEPPR
Sequences:
>Translated_399_residues MSRAWASGLSLVFLLVVSVTYLLVGVLHVRPLASSYPLTIQLAESGGLLPNQDVTLHGVRIGSVDSLTFTGTGVNAVVNV DGGVRVPASAVVRVSGLSPAGEQYLDFSAGSDTGPFLTAGDVITRDRTDIPVTPAQLLSHADGVLAQVDPSKIERIKKEL SLSAAGPRKLTDIVDGGVFLLATLDSVLPETVSAIKDSRTVLSAAVDVNGGIAATARNLRGTLTGINAMDGGYRTLIGQA PQVLHAADKLFDDNSDTMVQLLANLAVNARLSYVRVPALNALFPNYRGSALEAFISTMHDYGLWVTADLYPRYACDYGTP RHPPSAADYPEPFLYTYCRDDDPAILVRGAKNAPRPAGDDTAGPPPGADLGARSDPTPPGRYTIPTPYGGPALPIEPPR >Mature_398_residues SRAWASGLSLVFLLVVSVTYLLVGVLHVRPLASSYPLTIQLAESGGLLPNQDVTLHGVRIGSVDSLTFTGTGVNAVVNVD GGVRVPASAVVRVSGLSPAGEQYLDFSAGSDTGPFLTAGDVITRDRTDIPVTPAQLLSHADGVLAQVDPSKIERIKKELS LSAAGPRKLTDIVDGGVFLLATLDSVLPETVSAIKDSRTVLSAAVDVNGGIAATARNLRGTLTGINAMDGGYRTLIGQAP QVLHAADKLFDDNSDTMVQLLANLAVNARLSYVRVPALNALFPNYRGSALEAFISTMHDYGLWVTADLYPRYACDYGTPR HPPSAADYPEPFLYTYCRDDDPAILVRGAKNAPRPAGDDTAGPPPGADLGARSDPTPPGRYTIPTPYGGPALPIEPPR
Specific function: Unknown
COG id: COG1463
COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41906; Mature: 41775
Theoretical pI: Translated: 5.16; Mature: 5.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRAWASGLSLVFLLVVSVTYLLVGVLHVRPLASSYPLTIQLAESGGLLPNQDVTLHGVR CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCEEEEEEE IGSVDSLTFTGTGVNAVVNVDGGVRVPASAVVRVSGLSPAGEQYLDFSAGSDTGPFLTAG ECCCCCEEEECCCCEEEEECCCCCCCCHHHEEEEECCCCCCHHHEECCCCCCCCCEEEEC DVITRDRTDIPVTPAQLLSHADGVLAQVDPSKIERIKKELSLSAAGPRKLTDIVDGGVFL CEEECCCCCCCCCHHHHHHHCCCCEEECCHHHHHHHHHHHCCCCCCCHHHHHHHCCCCHH LATLDSVLPETVSAIKDSRTVLSAAVDVNGGIAATARNLRGTLTGINAMDGGYRTLIGQA HHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCEEHHHHCCEEEEECCCCCCCHHHHHCCC PQVLHAADKLFDDNSDTMVQLLANLAVNARLSYVRVPALNALFPNYRGSALEAFISTMHD HHHHHHHHHHHCCCCHHHHHHHHHHHHHCEEEEEECCHHHHHCCCCCCHHHHHHHHHHHH YGLWVTADLYPRYACDYGTPRHPPSAADYPEPFLYTYCRDDDPAILVRGAKNAPRPAGDD CCEEEEEECCCCEECCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEECCCCCCCCCCCC TAGPPPGADLGARSDPTPPGRYTIPTPYGGPALPIEPPR CCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCC >Mature Secondary Structure SRAWASGLSLVFLLVVSVTYLLVGVLHVRPLASSYPLTIQLAESGGLLPNQDVTLHGVR CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCEEEEEEE IGSVDSLTFTGTGVNAVVNVDGGVRVPASAVVRVSGLSPAGEQYLDFSAGSDTGPFLTAG ECCCCCEEEECCCCEEEEECCCCCCCCHHHEEEEECCCCCCHHHEECCCCCCCCCEEEEC DVITRDRTDIPVTPAQLLSHADGVLAQVDPSKIERIKKELSLSAAGPRKLTDIVDGGVFL CEEECCCCCCCCCHHHHHHHCCCCEEECCHHHHHHHHHHHCCCCCCCHHHHHHHCCCCHH LATLDSVLPETVSAIKDSRTVLSAAVDVNGGIAATARNLRGTLTGINAMDGGYRTLIGQA HHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCEEHHHHCCEEEEECCCCCCCHHHHHCCC PQVLHAADKLFDDNSDTMVQLLANLAVNARLSYVRVPALNALFPNYRGSALEAFISTMHD HHHHHHHHHHHCCCCHHHHHHHHHHHHHCEEEEEECCHHHHHCCCCCCHHHHHHHHHHHH YGLWVTADLYPRYACDYGTPRHPPSAADYPEPFLYTYCRDDDPAILVRGAKNAPRPAGDD CCEEEEEECCCCEECCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEECCCCCCCCCCCC TAGPPPGADLGARSDPTPPGRYTIPTPYGGPALPIEPPR CCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA