Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
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Accession | NC_010397 |
Length | 5,067,172 |
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The map label for this gene is 169628773
Identifier: 169628773
GI number: 169628773
Start: 1709635
End: 1710726
Strand: Direct
Name: 169628773
Synonym: MAB_1683
Alternate gene names: NA
Gene position: 1709635-1710726 (Clockwise)
Preceding gene: 169628772
Following gene: 169628774
Centisome position: 33.74
GC content: 64.1
Gene sequence:
>1092_bases ATGAGCAGCATGCGCGAAGATCAGCAGGGCAGGCTGACGGTCCAGCCACGGCAGGTGCAGGGCGGCTCCAAGGAGGCGCT GGGCATATCGATGGCCGACGCGCGAGCACTGGTGGCAGACCTCGCCGCCCGCCGCCAGTGGATCTATTGGCTTGATCTTG CCGCCTGTCTGGCGGTTGGATACACGGCCTTCCTGTTGTGCCCGGTCGAGAACCTGCTCTCGTTGCCGGCGGTGGCGTGC ATTGTGGTGGCGGCGTTCGCTTTCTATCGCGCCGTGTTGTTCGTCCATGAGCTGGTGCACGCCGAGGACGACCTGCGCTG GTTCTCGGTGGTGTGGCACGCGGTGTGCGGAATACCTTTCCTGACACCGAAATTCACCTTTGAGTTTCATCATGAACACC ATGCGTCGCGCACCTACGGCACGGCGGAGGACGGTGAATACGTCACCTATGCCAGTGAGCCGCGCTGGCGCATCATCGTG TTGCCGTTCAGCGCGCTGGGCGGGCCGCTGGCCTTCGTTTTCCGATTCTTGGTGCTGGCGCCGCTGAGCTGGCTGATCCC CGCGATACGGCCCATTGTGCTGACCCGGGCATCATCGTTGATGATCGATGCCGATTTTGAGCGGCCATTGCCGCCGTCGG GCACCCCACGCTCCTGGCTGGTGCAGGAAATTGCTTGTTTCGTGTACACCACAACGCTTTTGGTGCTGCTGCTGCTGGGC GCCTACTCGCCGTATCGGCTGGTGGAGGCGTATGCGGTGATCGCCCTGGCGCTGTTTGTCAACTGGCTACGGGTACTCGT GGCGCACCGGTACGAAGGTAAGAGCGAGCGCATGACCTTTCCCGAGCAGGTTCTCGATTCCATCGATCACCCGTCGGTGC CCGTCCTCGGCTCGCTGTGGGCACCGGTCGGCTTGCGTTTCCATGCGGTGCACCACTTCTTCCCTCAGCTGCCTTACCAC CAACTGGGCGAGGCGCGCCGCCGGCTGATGGCGGCGATCCCGCCCGATGCCGGGTACCGGGCCACCGAAGACCGTTCACT CGCCTCATCGCTGCGGCGGCTGCTCGCCCACCCGCGAAAGGAGGCGGTATGA
Upstream 100 bases:
>100_bases AATTGATGGCCCGCGAGTTGTATTACGCGCCCGACAGGGCAGTGCGAGAACTGGGCATACCCAAGGTCTCTACTCACGAA TTGATAGCGGAGTTTGTGCG
Downstream 100 bases:
>100_bases CCGTCAGTCAATTCACATCCACCGCAAGAGAGTCCGCGGCCGCGACGTACTCACGACGTTTGCCGATCCGGCCCGTCGAG GCGCGGGGCGCCCGGGTGCG
Product: putative fatty acid desaturase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 363; Mature: 362
Protein sequence:
>363_residues MSSMREDQQGRLTVQPRQVQGGSKEALGISMADARALVADLAARRQWIYWLDLAACLAVGYTAFLLCPVENLLSLPAVAC IVVAAFAFYRAVLFVHELVHAEDDLRWFSVVWHAVCGIPFLTPKFTFEFHHEHHASRTYGTAEDGEYVTYASEPRWRIIV LPFSALGGPLAFVFRFLVLAPLSWLIPAIRPIVLTRASSLMIDADFERPLPPSGTPRSWLVQEIACFVYTTTLLVLLLLG AYSPYRLVEAYAVIALALFVNWLRVLVAHRYEGKSERMTFPEQVLDSIDHPSVPVLGSLWAPVGLRFHAVHHFFPQLPYH QLGEARRRLMAAIPPDAGYRATEDRSLASSLRRLLAHPRKEAV
Sequences:
>Translated_363_residues MSSMREDQQGRLTVQPRQVQGGSKEALGISMADARALVADLAARRQWIYWLDLAACLAVGYTAFLLCPVENLLSLPAVAC IVVAAFAFYRAVLFVHELVHAEDDLRWFSVVWHAVCGIPFLTPKFTFEFHHEHHASRTYGTAEDGEYVTYASEPRWRIIV LPFSALGGPLAFVFRFLVLAPLSWLIPAIRPIVLTRASSLMIDADFERPLPPSGTPRSWLVQEIACFVYTTTLLVLLLLG AYSPYRLVEAYAVIALALFVNWLRVLVAHRYEGKSERMTFPEQVLDSIDHPSVPVLGSLWAPVGLRFHAVHHFFPQLPYH QLGEARRRLMAAIPPDAGYRATEDRSLASSLRRLLAHPRKEAV >Mature_362_residues SSMREDQQGRLTVQPRQVQGGSKEALGISMADARALVADLAARRQWIYWLDLAACLAVGYTAFLLCPVENLLSLPAVACI VVAAFAFYRAVLFVHELVHAEDDLRWFSVVWHAVCGIPFLTPKFTFEFHHEHHASRTYGTAEDGEYVTYASEPRWRIIVL PFSALGGPLAFVFRFLVLAPLSWLIPAIRPIVLTRASSLMIDADFERPLPPSGTPRSWLVQEIACFVYTTTLLVLLLLGA YSPYRLVEAYAVIALALFVNWLRVLVAHRYEGKSERMTFPEQVLDSIDHPSVPVLGSLWAPVGLRFHAVHHFFPQLPYHQ LGEARRRLMAAIPPDAGYRATEDRSLASSLRRLLAHPRKEAV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40811; Mature: 40680
Theoretical pI: Translated: 7.98; Mature: 7.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSMREDQQGRLTVQPRQVQGGSKEALGISMADARALVADLAARRQWIYWLDLAACLAVG CCCCCCCCCCCEEECCHHCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YTAFLLCPVENLLSLPAVACIVVAAFAFYRAVLFVHELVHAEDDLRWFSVVWHAVCGIPF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCC LTPKFTFEFHHEHHASRTYGTAEDGEYVTYASEPRWRIIVLPFSALGGPLAFVFRFLVLA CCCCCEEEEHHHHHCCCCCCCCCCCCEEEEECCCCEEEEEEEHHHCCCHHHHHHHHHHHH PLSWLIPAIRPIVLTRASSLMIDADFERPLPPSGTPRSWLVQEIACFVYTTTLLVLLLLG HHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH AYSPYRLVEAYAVIALALFVNWLRVLVAHRYEGKSERMTFPEQVLDSIDHPSVPVLGSLW CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCHHHHHH APVGLRFHAVHHFFPQLPYHQLGEARRRLMAAIPPDAGYRATEDRSLASSLRRLLAHPRK HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCHH EAV CCC >Mature Secondary Structure SSMREDQQGRLTVQPRQVQGGSKEALGISMADARALVADLAARRQWIYWLDLAACLAVG CCCCCCCCCCEEECCHHCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YTAFLLCPVENLLSLPAVACIVVAAFAFYRAVLFVHELVHAEDDLRWFSVVWHAVCGIPF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCC LTPKFTFEFHHEHHASRTYGTAEDGEYVTYASEPRWRIIVLPFSALGGPLAFVFRFLVLA CCCCCEEEEHHHHHCCCCCCCCCCCCEEEEECCCCEEEEEEEHHHCCCHHHHHHHHHHHH PLSWLIPAIRPIVLTRASSLMIDADFERPLPPSGTPRSWLVQEIACFVYTTTLLVLLLLG HHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH AYSPYRLVEAYAVIALALFVNWLRVLVAHRYEGKSERMTFPEQVLDSIDHPSVPVLGSLW CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCHHHHHH APVGLRFHAVHHFFPQLPYHQLGEARRRLMAAIPPDAGYRATEDRSLASSLRRLLAHPRK HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCHH EAV CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA