Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
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Accession | NC_010397 |
Length | 5,067,172 |
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The map label for this gene is 169627421
Identifier: 169627421
GI number: 169627421
Start: 320076
End: 320516
Strand: Direct
Name: 169627421
Synonym: MAB_0317
Alternate gene names: NA
Gene position: 320076-320516 (Clockwise)
Preceding gene: 169627420
Following gene: 169627423
Centisome position: 6.32
GC content: 64.63
Gene sequence:
>441_bases ATGGGTCAGGTCAGTGCGTCCAGTTCGGTGTTGATCGACGCGGCGCCGGAGGCAGTGCTCGCCGCGGTCGCCGACTACCA GAATGTGCGCCCGCAGATCCTGTCCAGCCACTACCGCGACTACCAGGTGCTCGAGGGCGGTCAGGGTGAGGGCACGGTGG CGTCCTGGAAGCTGCAGGCCACCGAGTCGCGCGTGCGGGATATCAAGTCGGCCGTGAGCGTGGCTGGGCATACCGTCATC GAGAAGGACGCCAACTCCACCCTGGTGACCACGTGGACTGTGGCACCCGCCGGGCCCGGCTCATCCGTCACCACCAAGAC CGCGTGGACCGGTGGCGGCGGCATCAAGGGATTCTTCGAGAAGACCTTTGCCCCGTTGGGACTCAAGAAGATTCAGGCCG AGGTACTGGCCAATCTCAAGCAGGTGGTGGAAAAGGGTTAG
Upstream 100 bases:
>100_bases CAGACTGTAGAGGGGGAACGCCGCCTGGGCGATCTGGTGAGCGAGCCCTAGACTGCGACTACAACCAGTAGTAGAACCAA GTAGTAGCGAGGGAGAACTC
Downstream 100 bases:
>100_bases CCGCCGGCGGGCGCGGCCTCGGGCGCCGGGGCCGCGGCGGGCGCCGTACCGCTGAGGTACGCGACGATGCCCTGGACAAC GGCTTGCGCGTACTTTGACC
Product: hypothetical protein
Products: NA
Alternate protein names: KanY Protein; Polyketide Cyclase / Dehydrase And Lipid Transport
Number of amino acids: Translated: 146; Mature: 145
Protein sequence:
>146_residues MGQVSASSSVLIDAAPEAVLAAVADYQNVRPQILSSHYRDYQVLEGGQGEGTVASWKLQATESRVRDIKSAVSVAGHTVI EKDANSTLVTTWTVAPAGPGSSVTTKTAWTGGGGIKGFFEKTFAPLGLKKIQAEVLANLKQVVEKG
Sequences:
>Translated_146_residues MGQVSASSSVLIDAAPEAVLAAVADYQNVRPQILSSHYRDYQVLEGGQGEGTVASWKLQATESRVRDIKSAVSVAGHTVI EKDANSTLVTTWTVAPAGPGSSVTTKTAWTGGGGIKGFFEKTFAPLGLKKIQAEVLANLKQVVEKG >Mature_145_residues GQVSASSSVLIDAAPEAVLAAVADYQNVRPQILSSHYRDYQVLEGGQGEGTVASWKLQATESRVRDIKSAVSVAGHTVIE KDANSTLVTTWTVAPAGPGSSVTTKTAWTGGGGIKGFFEKTFAPLGLKKIQAEVLANLKQVVEKG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15257; Mature: 15126
Theoretical pI: Translated: 8.93; Mature: 8.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGQVSASSSVLIDAAPEAVLAAVADYQNVRPQILSSHYRDYQVLEGGQGEGTVASWKLQA CCCCCCCCCEEEECCHHHHHHHHHHHHCCCHHHHHHHCCCEEEEECCCCCCCEEEEEEHH TESRVRDIKSAVSVAGHTVIEKDANSTLVTTWTVAPAGPGSSVTTKTAWTGGGGIKGFFE HHHHHHHHHHHHHHHCCCEEECCCCCEEEEEEEECCCCCCCCCEEEEEECCCCCCHHHHH KTFAPLGLKKIQAEVLANLKQVVEKG HHHCCCCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure GQVSASSSVLIDAAPEAVLAAVADYQNVRPQILSSHYRDYQVLEGGQGEGTVASWKLQA CCCCCCCCEEEECCHHHHHHHHHHHHCCCHHHHHHHCCCEEEEECCCCCCCEEEEEEHH TESRVRDIKSAVSVAGHTVIEKDANSTLVTTWTVAPAGPGSSVTTKTAWTGGGGIKGFFE HHHHHHHHHHHHHHHCCCEEECCCCCEEEEEEEECCCCCCCCCEEEEEECCCCCCHHHHH KTFAPLGLKKIQAEVLANLKQVVEKG HHHCCCCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA