| Definition | Finegoldia magna ATCC 29328 chromosome, complete genome. |
|---|---|
| Accession | NC_010376 |
| Length | 1,797,577 |
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The map label for this gene is yueF [H]
Identifier: 169824238
GI number: 169824238
Start: 598839
End: 599984
Strand: Direct
Name: yueF [H]
Synonym: FMG_0541
Alternate gene names: 169824238
Gene position: 598839-599984 (Clockwise)
Preceding gene: 169824237
Following gene: 169824239
Centisome position: 33.31
GC content: 30.63
Gene sequence:
>1146_bases ATGAAATTATTAAAAGACGACAAAAGAAAAATCCAAATAGGAATTACTATATTAATCGTTCCGGTTATTTTGGCATATCT TTTGTTTAATGGAAAATCAATAGGAAATGCATTAAGTACTTTTATGGCGATTATATCTCCATTTATTATTGGTGCTGCAT TAGCTTTTGTATTGAATATGCCGATGAATTTTATTGAGAATAAGCTTTTAAAAAAATGGACTTCAAAGCCGGGTCTAAAA AGGGCAATATCTCTGCTAATAAGCTTAGTAATAGTTAGTGCGATATTAACATTTGTAGTGACACTTATAATTCCTAATTT TTTAGAGGCTATTAAATCACTAATACAAGGTATTCCGGTGTTGGTTGAAAAGCTAAGAAAATATCCGGAAATAGCAAAAC AATTAGATAAAATTTACGACACATACGCTATAACAAGTACTCATGATTTGTTTGTAAAATTGAAGCCTTATTTAACTAAA AATGGATTGGATATATTGAACAATGTATTTTTTGGAATTAGCACAGTATTTTCTGTTGTACTTAGCTTTGTAGTCTCGTT CACATTTGCTATTTATTTATTATTTTCAAAAGAAACTTTGAGAAGACAATTTACAGAATTGACTTATGTTTTCTTCGGTG GGAAAACTGCAAAAAGAATTATTGTTTTCTTCAAAGTCGCCTACGAAAAATTTTACTCGTTCTTCAAAGGCCAATTTATC GAAGCGTTTATGCTTGGGTTTATGTGTTTCATAGGAATGTATTTATTGAAGATGCCAAACGCTGCAACAGTTAGTGTATT AATTGGTTTTGGAGCGTTGATTCCACTGGTTGGAGCTATACTAGGAGCTGCTCTAGGAGCTTTGATTATTTTAATCGAAT CTTTTTCAAAAGCGATTATGTTTGTGATTTTCATAATTGTACTTCAACAATTTGATGGTAATGTAACTTATCCTAGAATT GTTGGTTCTTCGGTAGGACTTCCATCTATTTGGGTTCTAGTTGCAGTTACCATAGGTGCTGCAGTAAGTGGTATTGTTGG AATGCTTATTTTCGTTCCAATATTTGCTACAATCTATGAATTATTGTACAGATATAAGAAAAAGAAATTAGAAGACAAAA ACATTTGTATTATTGAAGAAAAATAA
Upstream 100 bases:
>100_bases CCCTGGAATCAAGGTTAATCCATTACAATTTGCAAAAGAATAATATATAAGAAGTTTTTAGCCACCGTAAAGGTGGCTTT TCTTAAATTCGGAGGAAAAA
Downstream 100 bases:
>100_bases TAAAAAAGTGTTGACATATTCATTGAATATGATATAATAATCAAGTAATTAATTTGGGCTACCGAAGACAGTAGGGACTA TTAAGTTTAATCATCCTACA
Product: putative permease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 381; Mature: 381
Protein sequence:
>381_residues MKLLKDDKRKIQIGITILIVPVILAYLLFNGKSIGNALSTFMAIISPFIIGAALAFVLNMPMNFIENKLLKKWTSKPGLK RAISLLISLVIVSAILTFVVTLIIPNFLEAIKSLIQGIPVLVEKLRKYPEIAKQLDKIYDTYAITSTHDLFVKLKPYLTK NGLDILNNVFFGISTVFSVVLSFVVSFTFAIYLLFSKETLRRQFTELTYVFFGGKTAKRIIVFFKVAYEKFYSFFKGQFI EAFMLGFMCFIGMYLLKMPNAATVSVLIGFGALIPLVGAILGAALGALIILIESFSKAIMFVIFIIVLQQFDGNVTYPRI VGSSVGLPSIWVLVAVTIGAAVSGIVGMLIFVPIFATIYELLYRYKKKKLEDKNICIIEEK
Sequences:
>Translated_381_residues MKLLKDDKRKIQIGITILIVPVILAYLLFNGKSIGNALSTFMAIISPFIIGAALAFVLNMPMNFIENKLLKKWTSKPGLK RAISLLISLVIVSAILTFVVTLIIPNFLEAIKSLIQGIPVLVEKLRKYPEIAKQLDKIYDTYAITSTHDLFVKLKPYLTK NGLDILNNVFFGISTVFSVVLSFVVSFTFAIYLLFSKETLRRQFTELTYVFFGGKTAKRIIVFFKVAYEKFYSFFKGQFI EAFMLGFMCFIGMYLLKMPNAATVSVLIGFGALIPLVGAILGAALGALIILIESFSKAIMFVIFIIVLQQFDGNVTYPRI VGSSVGLPSIWVLVAVTIGAAVSGIVGMLIFVPIFATIYELLYRYKKKKLEDKNICIIEEK >Mature_381_residues MKLLKDDKRKIQIGITILIVPVILAYLLFNGKSIGNALSTFMAIISPFIIGAALAFVLNMPMNFIENKLLKKWTSKPGLK RAISLLISLVIVSAILTFVVTLIIPNFLEAIKSLIQGIPVLVEKLRKYPEIAKQLDKIYDTYAITSTHDLFVKLKPYLTK NGLDILNNVFFGISTVFSVVLSFVVSFTFAIYLLFSKETLRRQFTELTYVFFGGKTAKRIIVFFKVAYEKFYSFFKGQFI EAFMLGFMCFIGMYLLKMPNAATVSVLIGFGALIPLVGAILGAALGALIILIESFSKAIMFVIFIIVLQQFDGNVTYPRI VGSSVGLPSIWVLVAVTIGAAVSGIVGMLIFVPIFATIYELLYRYKKKKLEDKNICIIEEK
Specific function: Unknown
COG id: COG0628
COG function: function code R; Predicted permease
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0118 (perM) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002549 [H]
Pfam domain/function: PF01594 UPF0118 [H]
EC number: NA
Molecular weight: Translated: 42526; Mature: 42526
Theoretical pI: Translated: 10.29; Mature: 10.29
Prosite motif: PS00041 HTH_ARAC_FAMILY_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLLKDDKRKIQIGITILIVPVILAYLLFNGKSIGNALSTFMAIISPFIIGAALAFVLNM CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC PMNFIENKLLKKWTSKPGLKRAISLLISLVIVSAILTFVVTLIIPNFLEAIKSLIQGIPV CHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVEKLRKYPEIAKQLDKIYDTYAITSTHDLFVKLKPYLTKNGLDILNNVFFGISTVFSVV HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHEEECCHHCCCCHHHHHHHHHHHHHHHHHH LSFVVSFTFAIYLLFSKETLRRQFTELTYVFFGGKTAKRIIVFFKVAYEKFYSFFKGQFI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH EAFMLGFMCFIGMYLLKMPNAATVSVLIGFGALIPLVGAILGAALGALIILIESFSKAIM HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FVIFIIVLQQFDGNVTYPRIVGSSVGLPSIWVLVAVTIGAAVSGIVGMLIFVPIFATIYE HHHHHHHHHHHCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLYRYKKKKLEDKNICIIEEK HHHHHHHHCCCCCCEEEEECC >Mature Secondary Structure MKLLKDDKRKIQIGITILIVPVILAYLLFNGKSIGNALSTFMAIISPFIIGAALAFVLNM CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC PMNFIENKLLKKWTSKPGLKRAISLLISLVIVSAILTFVVTLIIPNFLEAIKSLIQGIPV CHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVEKLRKYPEIAKQLDKIYDTYAITSTHDLFVKLKPYLTKNGLDILNNVFFGISTVFSVV HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHEEECCHHCCCCHHHHHHHHHHHHHHHHHH LSFVVSFTFAIYLLFSKETLRRQFTELTYVFFGGKTAKRIIVFFKVAYEKFYSFFKGQFI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH EAFMLGFMCFIGMYLLKMPNAATVSVLIGFGALIPLVGAILGAALGALIILIESFSKAIM HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FVIFIIVLQQFDGNVTYPRIVGSSVGLPSIWVLVAVTIGAAVSGIVGMLIFVPIFATIYE HHHHHHHHHHHCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLYRYKKKKLEDKNICIIEEK HHHHHHHHCCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]