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The map label for this gene is rbgA [H]

Identifier: 169824228

GI number: 169824228

Start: 593503

End: 594360

Strand: Direct

Name: rbgA [H]

Synonym: FMG_0531

Alternate gene names: 169824228

Gene position: 593503-594360 (Clockwise)

Preceding gene: 169824227

Following gene: 169824229

Centisome position: 33.02

GC content: 29.84

Gene sequence:

>858_bases
ATGGACATTAATAATATAAACTGGTATCCGGGTCACATGAAAAAAGCTATCGACAAGATTAAAGAAAACATGAAACTTGT
CGACATAGTGTTGGTACTTGTGGATAGCAGAATTGTAAAATCATCCATGAATCCAGTGATAGAAGATATTTTAAAGGATA
AGCCACAATTGATTTTATTGAACAAGATGGACATGGCAGATCCTAAAATTACACAAAACTGGATTAATTATTTTGCAAAG
AAAAATATAACAGCACTTCCAATCGATAGTAAAAACGGTAAAAATTTGGATAAAATTGAGCCAACAACAAAAAAGATTTT
AGAAGATGTACTTAGTAGTAGAAAAGACAAAAACATAAAATCAGAAATTATTAGAATGATGATTGTTGGTATTCCAAATG
TTGGAAAATCTACAATAATTAATAAATTATCCAACAGACAATCTGCGAAAACTGGAAACACTCCAGGTGTTACAAGAACT
AATCAATGGATTAGAATAAAAGGCAAGATGGAATTATTGGATACACCAGGTGTTTTGTGGCCAAAATTTGAAGACAATGA
AATTGGATTGAACTTGGCATTTACTGGAGCTATAAAAGACGAAATTTTGGATGAAGAAAACTTAGCATACAAACTTATTG
AGAAACTAATGAGTATTGATCCACAAATTTTAGAGAAGAGATATTCAGTTGATACACAAAACAAGGAAACAATCGAAATA
ATGGATGATATTGCAATAAGAAGAGGCTGTTTATTAAAAGGGAAAAATATTGATTATTCTAAAGTTTCATCAATAATTAT
CGATGAATTTAGAAAAACAAAGTTAGGAAGAATTTCATTAGAAGATGTTTGCGATTGA

Upstream 100 bases:

>100_bases
ACACAGAGAAGGTAAAGCTGCTAAAGTTAAAGAAAAACAAAAATTCTAAATTGAGTGCTGAGAATTTCTCAGTACTTTTT
TTAGATGGAAAGGAAATAAC

Downstream 100 bases:

>100_bases
TTATAACGAATTTGAAGAAGAATTAATTTGTGGAATAGATGAAGTTGGAAGAGGACCATTGGCAGGGCCTGTTGTGACTT
GTGCTATTATAATGCCTAAA

Product: putative GTPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 285; Mature: 285

Protein sequence:

>285_residues
MDINNINWYPGHMKKAIDKIKENMKLVDIVLVLVDSRIVKSSMNPVIEDILKDKPQLILLNKMDMADPKITQNWINYFAK
KNITALPIDSKNGKNLDKIEPTTKKILEDVLSSRKDKNIKSEIIRMMIVGIPNVGKSTIINKLSNRQSAKTGNTPGVTRT
NQWIRIKGKMELLDTPGVLWPKFEDNEIGLNLAFTGAIKDEILDEENLAYKLIEKLMSIDPQILEKRYSVDTQNKETIEI
MDDIAIRRGCLLKGKNIDYSKVSSIIIDEFRKTKLGRISLEDVCD

Sequences:

>Translated_285_residues
MDINNINWYPGHMKKAIDKIKENMKLVDIVLVLVDSRIVKSSMNPVIEDILKDKPQLILLNKMDMADPKITQNWINYFAK
KNITALPIDSKNGKNLDKIEPTTKKILEDVLSSRKDKNIKSEIIRMMIVGIPNVGKSTIINKLSNRQSAKTGNTPGVTRT
NQWIRIKGKMELLDTPGVLWPKFEDNEIGLNLAFTGAIKDEILDEENLAYKLIEKLMSIDPQILEKRYSVDTQNKETIEI
MDDIAIRRGCLLKGKNIDYSKVSSIIIDEFRKTKLGRISLEDVCD
>Mature_285_residues
MDINNINWYPGHMKKAIDKIKENMKLVDIVLVLVDSRIVKSSMNPVIEDILKDKPQLILLNKMDMADPKITQNWINYFAK
KNITALPIDSKNGKNLDKIEPTTKKILEDVLSSRKDKNIKSEIIRMMIVGIPNVGKSTIINKLSNRQSAKTGNTPGVTRT
NQWIRIKGKMELLDTPGVLWPKFEDNEIGLNLAFTGAIKDEILDEENLAYKLIEKLMSIDPQILEKRYSVDTQNKETIEI
MDDIAIRRGCLLKGKNIDYSKVSSIIIDEFRKTKLGRISLEDVCD

Specific function: Binds GTP and GDP [H]

COG id: COG1161

COG function: function code R; Predicted GTPases

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 G (guanine nucleotide-binding) domain [H]

Homologues:

Organism=Homo sapiens, GI93277113, Length=294, Percent_Identity=28.5714285714286, Blast_Score=136, Evalue=3e-32,
Organism=Homo sapiens, GI7019419, Length=260, Percent_Identity=26.5384615384615, Blast_Score=79, Evalue=6e-15,
Organism=Caenorhabditis elegans, GI193211047, Length=224, Percent_Identity=30.3571428571429, Blast_Score=87, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI25143545, Length=280, Percent_Identity=25.3571428571429, Blast_Score=84, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI115535155, Length=280, Percent_Identity=25.3571428571429, Blast_Score=83, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI32563985, Length=247, Percent_Identity=26.3157894736842, Blast_Score=80, Evalue=9e-16,
Organism=Caenorhabditis elegans, GI71990926, Length=247, Percent_Identity=26.3157894736842, Blast_Score=80, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI32563983, Length=247, Percent_Identity=26.3157894736842, Blast_Score=80, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI17534827, Length=210, Percent_Identity=29.0476190476191, Blast_Score=78, Evalue=5e-15,
Organism=Caenorhabditis elegans, GI71982363, Length=183, Percent_Identity=28.9617486338798, Blast_Score=73, Evalue=2e-13,
Organism=Saccharomyces cerevisiae, GI6320842, Length=290, Percent_Identity=26.8965517241379, Blast_Score=88, Evalue=1e-18,
Organism=Saccharomyces cerevisiae, GI6324381, Length=270, Percent_Identity=24.4444444444444, Blast_Score=77, Evalue=4e-15,
Organism=Drosophila melanogaster, GI85815858, Length=225, Percent_Identity=31.5555555555556, Blast_Score=111, Evalue=5e-25,
Organism=Drosophila melanogaster, GI28572990, Length=211, Percent_Identity=29.8578199052133, Blast_Score=84, Evalue=1e-16,
Organism=Drosophila melanogaster, GI19922460, Length=271, Percent_Identity=25.0922509225092, Blast_Score=84, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023179
- InterPro:   IPR019991
- InterPro:   IPR016478
- InterPro:   IPR002917 [H]

Pfam domain/function: PF01926 MMR_HSR1 [H]

EC number: NA

Molecular weight: Translated: 32525; Mature: 32525

Theoretical pI: Translated: 9.58; Mature: 9.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDINNINWYPGHMKKAIDKIKENMKLVDIVLVLVDSRIVKSSMNPVIEDILKDKPQLILL
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCEEEE
NKMDMADPKITQNWINYFAKKNITALPIDSKNGKNLDKIEPTTKKILEDVLSSRKDKNIK
ECCCCCCCHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHH
SEIIRMMIVGIPNVGKSTIINKLSNRQSAKTGNTPGVTRTNQWIRIKGKMELLDTPGVLW
HHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCEEEECCCCCCC
PKFEDNEIGLNLAFTGAIKDEILDEENLAYKLIEKLMSIDPQILEKRYSVDTQNKETIEI
CCCCCCCCCEEEEEECCHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHH
MDDIAIRRGCLLKGKNIDYSKVSSIIIDEFRKTKLGRISLEDVCD
HHHHHHHHCCEEECCCCCHHHHHHHHHHHHHHHHCCCCCHHHHCC
>Mature Secondary Structure
MDINNINWYPGHMKKAIDKIKENMKLVDIVLVLVDSRIVKSSMNPVIEDILKDKPQLILL
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCEEEE
NKMDMADPKITQNWINYFAKKNITALPIDSKNGKNLDKIEPTTKKILEDVLSSRKDKNIK
ECCCCCCCHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHH
SEIIRMMIVGIPNVGKSTIINKLSNRQSAKTGNTPGVTRTNQWIRIKGKMELLDTPGVLW
HHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCEEEECCCCCCC
PKFEDNEIGLNLAFTGAIKDEILDEENLAYKLIEKLMSIDPQILEKRYSVDTQNKETIEI
CCCCCCCCCEEEEEECCHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHH
MDDIAIRRGCLLKGKNIDYSKVSSIIIDEFRKTKLGRISLEDVCD
HHHHHHHHCCEEECCCCCHHHHHHHHHHHHHHHHCCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]