| Definition | Finegoldia magna ATCC 29328 plasmid pFMC, complete sequence. |
|---|---|
| Accession | NC_010371 |
| Length | 189,163 |
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The map label for this gene is lytC [H]
Identifier: 169823659
GI number: 169823659
Start: 136226
End: 138931
Strand: Reverse
Name: lytC [H]
Synonym: FMG_P0145
Alternate gene names: 169823659
Gene position: 138931-136226 (Counterclockwise)
Preceding gene: 169823660
Following gene: 169823658
Centisome position: 73.45
GC content: 29.45
Gene sequence:
>2706_bases ATGAAAAACAAAAAATTATTAAAAGCAGTGGTAATGTTGTCATTGGCAACTACATTAGCAGTTCCATTTAACACGTTAGC AGATAAACAAGGAGTAAGAATAGATGGTAGAGATAGGTTTGAGGTTGCTATAAATGTGGCAAATAAGTTTTCGGATTCTA AAAGCTGTATCGTACTAAATTACTTAGCATATTCTGACAGTATATCATCTAGCGAAATAGCAAAAGGTGATATGCCAATA TACTATACTAAGGCGGATTCTATAGATTCTAATACATTAAAAGATATTAGAAACAAAGGATATAAAAATGTATTTATAAT TGGTGGAGAAAAATCAGTTTCAAAAGATGTTGAGAACGAATTGGCAAAAACTTCTAAAATAACTAGAGTTTCTGGTCAAA ACAGATATGATGTTAATTATAAGACATTAGATAAAAACAAAGAAAACTTAATTGTAGTAAGTGGAGAAAATTTTGCTGAC GGTTTGGTAAGTTCGGCACTTGCACAAATCAAAAATGCAACAATAGCTATCACGCCATCAAATGAGGTTCACGAAAGATT AAGTCAATACTTAAATGTAAATAAAAATTTAAAGAATATTTATATTGTTGGTGGAGAAAAATCTATAACTAAGAGTGTAG AAAACGAGTTATCAAAGTATGCAAATGTACAAAGAATTAGTGGCTCTAATAGATATGAAACATCAGAAAAATTAGCAAAA GAAATTTCTGATAGTAAATACATCGTAGTAAGTGGAGAAAACTTCGCAGATAACTTAGTTGCAGGGTCTCTTGCAAGAAG AGATAAAAGAGCTGTAGTTTTGTCTCCAAGAGTTGATTTTTCAACAATGGTTAGAGATATTGCTAAGAATAAGGATTTTA TCGTAATAGGAGGAAATAACTCTATTGATGAAAGTATTTTTGATAAAGATTTAGGTGCTGCTAAAACAGAAACTAAAAAG GTAAAAGTAAAAGAAATAATGCAGTATGCTACGAAAGAAGTTAAAGATTCAACATTAAAACAAGGCGAAAGAAAGACTAA GCAACAAGGAAAAGATGGAGAAAAAGAAGTAGTATATGAAGAAACATTCAAAAATGGTGTTGTTATTAGCAAGAAGAAAG TAAGCGAAAAAACAATAAAAGCACCAGTAGATGAAATAATTTTAGTTGGAACTAAAGTTGATCCTAAAAACCCTGAAGTT ACTAAAAGAAGAACAGTTAAAGAAACTATAAAATATGCTACGAAAGAAGTTAAAGATTCAACATTAAAACAAGGCGAAAG AAAGACAAAACAACAAGGAAAAGATGGAGAAAAAGAAGTAGTATATGAAGAAACATTCAAAAATGGTGTTGTTATTAACA AGAAGAAAGTAAGCGAAAAAACAATAAAAGCACCAGTAGATGAAATAATTTTAGTTGGAACTAAAGTTGATCCTAAAAAC CCTGAAGTTACTAAAAGAAGAACAGTTAAAGAAACTATAAAATATGCTACGAAAGAAGTTAAAGATTCAACATTAAAACA AGGCGAAAGAAAGACAAAACAACAAGGAAAAGATGGAGAAAAAGAAGTAGTATATGAAGAAACATTCAAAAATGGTGTTG TTATTAACAAGAAGAAAGTAAGCGAAAAAACAATAAAAGCACCAGTAGATGAAATAATTTTAGTTGGAACTAAGGTTGAG AAAAAAGATGAAGTAGTAGTTAAAAAAAGAACTGTTATTGAATCCATAAAACACATAACTAAAGAGGTTAATGATCCAAC TTTGAAAAAAGGCGAAAAGAAGACTAAGCAATTCGGGAAAGATGGCAAAAAAGAAGTAGTATATGAAGAAACATTCAAAA ATGGTGTTGTTATTAACAAGAAGAAAGTAAGCGAAAAAACAATAAAAGCACCAGTAGATGAAATAATTTTAGTTGGAACT AAAGTTGAGAAGAAAGATAAAGAAGATAAAGAGGTAGTTAAAACAATCACTGAGTATGAAGATATTGATTTTGAAACGGA AAAACAATATGATGAGTATTTAGATAAAGGTAAAACAGAAATAATTCAAAAGGGAGAAAAAGGGAAAAAAGAAATAGAAT ATTATGTTGTTTATAAAAATAATAAAGAAATTAGCAGATCAGTTAAGCATATTAAGACGATAAAAGTTCCTATCAATGAA ATAATCAAAATTGGAACAAATGAAGATAGAAATATAATAGAACCAATTCCAACAACAGATGAAGAATTGTTTAATTACTA CAATGTAGATTATAATGAACCTCTTAGCAAAGGAGAAAATGACATATTAACTGAAGTTAATAGAATTAGAAAAGAGAATG GGTTGTCCGCATTAAAGGTTTCTAAAACATTAACAAGAACAGCTAGAATTCACGCAAGAGATTCGGCAATTCTTAACGAA ACAACACACGATTGGTCGCCAAAAGTAAAAGAATTATCTGAAAGGTTAAAATTTATGAAAAGACAACTAGGAGCAGAGGT AACATTGGCTGCAAGTTGGGATGAAGATGCTTCTTCTATTATACAACGATTTATGAATTCTCCAGAACACAGAAAGATTT TATTAAAGAATAATGTGGAAAATATAGGTATAGGAAGATATGATAGCAAGTTTGATTTTAATAAAGATGGAAAGGTTGAA CCGACATCCAGAATATTTATAAGGGTATATGAACAAGATGAAAACCTTGACTATATCCCAGACTAA
Upstream 100 bases:
>100_bases TTATTTGCAAAAGGTACAAAATATAGAAATAAAGGATATTGTTGCTGCTCTGATTTTTAGATATAATAAATATACGAAAA TAACTTAAAAAGGAGTATTT
Downstream 100 bases:
>100_bases AACCACTTGTTAAAATTTTATATAAACCTTATAGAGCACCTTGTGTAATACGGGGTGCTTTACATAATTTTATTCAACTT CTTGTGATATAATTAAAGAA
Product: putative N-acetylmuramoyl-L-alanine amidase
Products: NA
Alternate protein names: Cell wall hydrolase; Cell wall-associated polypeptide CWBP49; CWBP49; Major autolysin [H]
Number of amino acids: Translated: 901; Mature: 901
Protein sequence:
>901_residues MKNKKLLKAVVMLSLATTLAVPFNTLADKQGVRIDGRDRFEVAINVANKFSDSKSCIVLNYLAYSDSISSSEIAKGDMPI YYTKADSIDSNTLKDIRNKGYKNVFIIGGEKSVSKDVENELAKTSKITRVSGQNRYDVNYKTLDKNKENLIVVSGENFAD GLVSSALAQIKNATIAITPSNEVHERLSQYLNVNKNLKNIYIVGGEKSITKSVENELSKYANVQRISGSNRYETSEKLAK EISDSKYIVVSGENFADNLVAGSLARRDKRAVVLSPRVDFSTMVRDIAKNKDFIVIGGNNSIDESIFDKDLGAAKTETKK VKVKEIMQYATKEVKDSTLKQGERKTKQQGKDGEKEVVYEETFKNGVVISKKKVSEKTIKAPVDEIILVGTKVDPKNPEV TKRRTVKETIKYATKEVKDSTLKQGERKTKQQGKDGEKEVVYEETFKNGVVINKKKVSEKTIKAPVDEIILVGTKVDPKN PEVTKRRTVKETIKYATKEVKDSTLKQGERKTKQQGKDGEKEVVYEETFKNGVVINKKKVSEKTIKAPVDEIILVGTKVE KKDEVVVKKRTVIESIKHITKEVNDPTLKKGEKKTKQFGKDGKKEVVYEETFKNGVVINKKKVSEKTIKAPVDEIILVGT KVEKKDKEDKEVVKTITEYEDIDFETEKQYDEYLDKGKTEIIQKGEKGKKEIEYYVVYKNNKEISRSVKHIKTIKVPINE IIKIGTNEDRNIIEPIPTTDEELFNYYNVDYNEPLSKGENDILTEVNRIRKENGLSALKVSKTLTRTARIHARDSAILNE TTHDWSPKVKELSERLKFMKRQLGAEVTLAASWDEDASSIIQRFMNSPEHRKILLKNNVENIGIGRYDSKFDFNKDGKVE PTSRIFIRVYEQDENLDYIPD
Sequences:
>Translated_901_residues MKNKKLLKAVVMLSLATTLAVPFNTLADKQGVRIDGRDRFEVAINVANKFSDSKSCIVLNYLAYSDSISSSEIAKGDMPI YYTKADSIDSNTLKDIRNKGYKNVFIIGGEKSVSKDVENELAKTSKITRVSGQNRYDVNYKTLDKNKENLIVVSGENFAD GLVSSALAQIKNATIAITPSNEVHERLSQYLNVNKNLKNIYIVGGEKSITKSVENELSKYANVQRISGSNRYETSEKLAK EISDSKYIVVSGENFADNLVAGSLARRDKRAVVLSPRVDFSTMVRDIAKNKDFIVIGGNNSIDESIFDKDLGAAKTETKK VKVKEIMQYATKEVKDSTLKQGERKTKQQGKDGEKEVVYEETFKNGVVISKKKVSEKTIKAPVDEIILVGTKVDPKNPEV TKRRTVKETIKYATKEVKDSTLKQGERKTKQQGKDGEKEVVYEETFKNGVVINKKKVSEKTIKAPVDEIILVGTKVDPKN PEVTKRRTVKETIKYATKEVKDSTLKQGERKTKQQGKDGEKEVVYEETFKNGVVINKKKVSEKTIKAPVDEIILVGTKVE KKDEVVVKKRTVIESIKHITKEVNDPTLKKGEKKTKQFGKDGKKEVVYEETFKNGVVINKKKVSEKTIKAPVDEIILVGT KVEKKDKEDKEVVKTITEYEDIDFETEKQYDEYLDKGKTEIIQKGEKGKKEIEYYVVYKNNKEISRSVKHIKTIKVPINE IIKIGTNEDRNIIEPIPTTDEELFNYYNVDYNEPLSKGENDILTEVNRIRKENGLSALKVSKTLTRTARIHARDSAILNE TTHDWSPKVKELSERLKFMKRQLGAEVTLAASWDEDASSIIQRFMNSPEHRKILLKNNVENIGIGRYDSKFDFNKDGKVE PTSRIFIRVYEQDENLDYIPD >Mature_901_residues MKNKKLLKAVVMLSLATTLAVPFNTLADKQGVRIDGRDRFEVAINVANKFSDSKSCIVLNYLAYSDSISSSEIAKGDMPI YYTKADSIDSNTLKDIRNKGYKNVFIIGGEKSVSKDVENELAKTSKITRVSGQNRYDVNYKTLDKNKENLIVVSGENFAD GLVSSALAQIKNATIAITPSNEVHERLSQYLNVNKNLKNIYIVGGEKSITKSVENELSKYANVQRISGSNRYETSEKLAK EISDSKYIVVSGENFADNLVAGSLARRDKRAVVLSPRVDFSTMVRDIAKNKDFIVIGGNNSIDESIFDKDLGAAKTETKK VKVKEIMQYATKEVKDSTLKQGERKTKQQGKDGEKEVVYEETFKNGVVISKKKVSEKTIKAPVDEIILVGTKVDPKNPEV TKRRTVKETIKYATKEVKDSTLKQGERKTKQQGKDGEKEVVYEETFKNGVVINKKKVSEKTIKAPVDEIILVGTKVDPKN PEVTKRRTVKETIKYATKEVKDSTLKQGERKTKQQGKDGEKEVVYEETFKNGVVINKKKVSEKTIKAPVDEIILVGTKVE KKDEVVVKKRTVIESIKHITKEVNDPTLKKGEKKTKQFGKDGKKEVVYEETFKNGVVINKKKVSEKTIKAPVDEIILVGT KVEKKDKEDKEVVKTITEYEDIDFETEKQYDEYLDKGKTEIIQKGEKGKKEIEYYVVYKNNKEISRSVKHIKTIKVPINE IIKIGTNEDRNIIEPIPTTDEELFNYYNVDYNEPLSKGENDILTEVNRIRKENGLSALKVSKTLTRTARIHARDSAILNE TTHDWSPKVKELSERLKFMKRQLGAEVTLAASWDEDASSIIQRFMNSPEHRKILLKNNVENIGIGRYDSKFDFNKDGKVE PTSRIFIRVYEQDENLDYIPD
Specific function: Autolysins are involved in some important biological processes such as cell separation, cell-wall turnover, competence for genetic transformation, formation of the flagella - in particular of its basal body - and sporulation. Has a high affinity for teich
COG id: COG2247
COG function: function code M; Putative cell wall-binding domain
Gene ontology:
Cell location: Secreted, cell wall [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the N-acetylmuramoyl-L-alanine amidase 3 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007253 - InterPro: IPR002508 [H]
Pfam domain/function: PF01520 Amidase_3; PF04122 CW_binding_2 [H]
EC number: =3.5.1.28 [H]
Molecular weight: Translated: 102097; Mature: 102097
Theoretical pI: Translated: 9.89; Mature: 9.89
Prosite motif: PS51109 G5
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNKKLLKAVVMLSLATTLAVPFNTLADKQGVRIDGRDRFEVAINVANKFSDSKSCIVLN CCCHHHHHHHHHHHHHHHHHCCHHHHCCCCCCEECCCCCEEEEEEEHHHCCCCCCEEEEE YLAYSDSISSSEIAKGDMPIYYTKADSIDSNTLKDIRNKGYKNVFIIGGEKSVSKDVENE EEECCCCCCCCHHCCCCCCEEEEECCCCCHHHHHHHHCCCCCEEEEECCCHHHHHHHHHH LAKTSKITRVSGQNRYDVNYKTLDKNKENLIVVSGENFADGLVSSALAQIKNATIAITPS HHHHHHHEEECCCCEECCCEEECCCCCCCEEEEECCCHHHHHHHHHHHHHCCCEEEECCC NEVHERLSQYLNVNKNLKNIYIVGGEKSITKSVENELSKYANVQRISGSNRYETSEKLAK HHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCHHCCCCCCCCCHHHHHHH EISDSKYIVVSGENFADNLVAGSLARRDKRAVVLSPRVDFSTMVRDIAKNKDFIVIGGNN HCCCCCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHCCCCEEEECCCC SIDESIFDKDLGAAKTETKKVKVKEIMQYATKEVKDSTLKQGERKTKQQGKDGEKEVVYE CCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH ETFKNGVVISKKKVSEKTIKAPVDEIILVGTKVDPKNPEVTKRRTVKETIKYATKEVKDS HHHCCCEEEEHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHH TLKQGERKTKQQGKDGEKEVVYEETFKNGVVINKKKVSEKTIKAPVDEIILVGTKVDPKN HHHHHHHHHHHCCCCCCHHHHHHHHHCCCEEEEHHHHHHHHHHCCCCCEEEEECCCCCCC PEVTKRRTVKETIKYATKEVKDSTLKQGERKTKQQGKDGEKEVVYEETFKNGVVINKKKV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCEEEEHHHH SEKTIKAPVDEIILVGTKVEKKDEVVVKKRTVIESIKHITKEVNDPTLKKGEKKTKQFGK HHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHCC DGKKEVVYEETFKNGVVINKKKVSEKTIKAPVDEIILVGTKVEKKDKEDKEVVKTITEYE CCCCCHHHHHHHCCCEEEEHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHHHHHHH DIDFETEKQYDEYLDKGKTEIIQKGEKGKKEIEYYVVYKNNKEISRSVKHIKTIKVPINE CCCCCHHHHHHHHHHCCHHHHHHCCCCCCCEEEEEEEEECCHHHHHHHHHHHEEEECHHH IIKIGTNEDRNIIEPIPTTDEELFNYYNVDYNEPLSKGENDILTEVNRIRKENGLSALKV HHCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHH SKTLTRTARIHARDSAILNETTHDWSPKVKELSERLKFMKRQLGAEVTLAASWDEDASSI HHHHHHHHHHHCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHH IQRFMNSPEHRKILLKNNVENIGIGRYDSKFDFNKDGKVEPTSRIFIRVYEQDENLDYIP HHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCC D C >Mature Secondary Structure MKNKKLLKAVVMLSLATTLAVPFNTLADKQGVRIDGRDRFEVAINVANKFSDSKSCIVLN CCCHHHHHHHHHHHHHHHHHCCHHHHCCCCCCEECCCCCEEEEEEEHHHCCCCCCEEEEE YLAYSDSISSSEIAKGDMPIYYTKADSIDSNTLKDIRNKGYKNVFIIGGEKSVSKDVENE EEECCCCCCCCHHCCCCCCEEEEECCCCCHHHHHHHHCCCCCEEEEECCCHHHHHHHHHH LAKTSKITRVSGQNRYDVNYKTLDKNKENLIVVSGENFADGLVSSALAQIKNATIAITPS HHHHHHHEEECCCCEECCCEEECCCCCCCEEEEECCCHHHHHHHHHHHHHCCCEEEECCC NEVHERLSQYLNVNKNLKNIYIVGGEKSITKSVENELSKYANVQRISGSNRYETSEKLAK HHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCHHCCCCCCCCCHHHHHHH EISDSKYIVVSGENFADNLVAGSLARRDKRAVVLSPRVDFSTMVRDIAKNKDFIVIGGNN HCCCCCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHCCCCEEEECCCC SIDESIFDKDLGAAKTETKKVKVKEIMQYATKEVKDSTLKQGERKTKQQGKDGEKEVVYE CCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH ETFKNGVVISKKKVSEKTIKAPVDEIILVGTKVDPKNPEVTKRRTVKETIKYATKEVKDS HHHCCCEEEEHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHH TLKQGERKTKQQGKDGEKEVVYEETFKNGVVINKKKVSEKTIKAPVDEIILVGTKVDPKN HHHHHHHHHHHCCCCCCHHHHHHHHHCCCEEEEHHHHHHHHHHCCCCCEEEEECCCCCCC PEVTKRRTVKETIKYATKEVKDSTLKQGERKTKQQGKDGEKEVVYEETFKNGVVINKKKV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCEEEEHHHH SEKTIKAPVDEIILVGTKVEKKDEVVVKKRTVIESIKHITKEVNDPTLKKGEKKTKQFGK HHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHCC DGKKEVVYEETFKNGVVINKKKVSEKTIKAPVDEIILVGTKVEKKDKEDKEVVKTITEYE CCCCCHHHHHHHCCCEEEEHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHHHHHHH DIDFETEKQYDEYLDKGKTEIIQKGEKGKKEIEYYVVYKNNKEISRSVKHIKTIKVPINE CCCCCHHHHHHHHHHCCHHHHHHCCCCCCCEEEEEEEEECCHHHHHHHHHHHEEEECHHH IIKIGTNEDRNIIEPIPTTDEELFNYYNVDYNEPLSKGENDILTEVNRIRKENGLSALKV HHCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHH SKTLTRTARIHARDSAILNETTHDWSPKVKELSERLKFMKRQLGAEVTLAASWDEDASSI HHHHHHHHHHHCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHH IQRFMNSPEHRKILLKNNVENIGIGRYDSKFDFNKDGKVEPTSRIFIRVYEQDENLDYIP HHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCC D C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1357079; 1682302; 9384377 [H]