Definition | Finegoldia magna ATCC 29328 plasmid pFMC, complete sequence. |
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Accession | NC_010371 |
Length | 189,163 |
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The map label for this gene is insQ [H]
Identifier: 169823655
GI number: 169823655
Start: 131662
End: 132825
Strand: Reverse
Name: insQ [H]
Synonym: FMG_P0141
Alternate gene names: 169823655
Gene position: 132825-131662 (Counterclockwise)
Preceding gene: 169823656
Following gene: 169823654
Centisome position: 70.22
GC content: 26.63
Gene sequence:
>1164_bases ATGTTAATAACCTACAAAACAGAGATTAAGCCTAATCCTGAACAAGTTATTAAGATTAAGCAAACTATGGGCGTATGTAG GTTTATATATAATTTTTATATTGTTGAAAATCAGAAAGCCTATAAAAACAATATGCCTTTTATAACAGCTTTTAATTTTT CTAAATGGTTGAATAACGTGTTTATTCCAAATAATCTAAATTATTCATGGATCAGGGATGTGTCTTCAAAATCTGTAAAG CAAAGCATTGTTTGTGCAGAAAGAGCTTTTAAGAGGTTCTTTAAAAAAGAATCTAAATTTCCTAGATTTAAAAAGAAAAA CAAATCTAATGTAAAGATGTATTTTGTTAGAAATAACAAAGGAGATTGTTTATGTGAAAGACATCGTATTAAAATCCCAA CACTAGGTTGGATTAAGATAAAAGAAAAAGGTTATATACCCACAAGTAAAGATGATTATGTAGTAAAAAGTGGGGCTATA TCATATAAGGCTGGTAGATATTATATATCGTGTCTAGTTGATATAGAAGAACCTCCAAAACAAATATTAAAACCTTTTGG TCTAGGAATTGACCTTGGATTAGAAAAGTTTGCTGTAATAAGTAATGGCAATGTTTATAAAAACATAAACAAGTCAAAGA AAATAATTAAATTAGAGAAAAAATTAAGACATGAGCAAAAATGCTTATCAAGGAAATATGAACAATTAAAAAATAATAAG AAAGGAGAGTCTACTCATAAAAACATACTAAAGCAAATAGCTAAGGTACAAAAAACACATTTAAAATTAAGCAATATCAG AACAGATTATATAAACAAAATAATAAATGAGCTAGTGAAAACCAAACCAGCATACATTGTTATTGAAAATTTAAACATAT CTGGGATGATCAAAAATAGATATTTATCTAAATCTATAAGCAATCAAAGATTCTATGAATTTAGACAAAAACTATTTAAT AAATGTAATTTTCATGGTATTGAATTAAGAATAGCAGATAGGTTCTATCCATCAAGTAAGACATGTCATAGTTGTGGTAG TATTAAAAAAGATTTAAAACTATCAGATAGAATATATAAATGTCCTACATGTGGTGAAATCATCGATAGAGACCTTAATG CAAGCTTAAATCTAAGAGATACCACATCTTATAAAATAGCATAA
Upstream 100 bases:
>100_bases AAAAAGAAGAAAAGGTAAAATCAGGAGATAAGAACAGGTAATGGAAATATGTAAAATAGTGTACAAAAGCGGAATAATGT AATTAAGTGGGTGAAATAAA
Downstream 100 bases:
>100_bases TAAAAAAAGCTATATAAGATATGTACCGATGGCTAGTCGGGAATTGACGACTGTGGAGTGTACAAGAACTTGTTAGTAGC AAAATCTTTGCAAAAGCATA
Product: transposase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 387; Mature: 387
Protein sequence:
>387_residues MLITYKTEIKPNPEQVIKIKQTMGVCRFIYNFYIVENQKAYKNNMPFITAFNFSKWLNNVFIPNNLNYSWIRDVSSKSVK QSIVCAERAFKRFFKKESKFPRFKKKNKSNVKMYFVRNNKGDCLCERHRIKIPTLGWIKIKEKGYIPTSKDDYVVKSGAI SYKAGRYYISCLVDIEEPPKQILKPFGLGIDLGLEKFAVISNGNVYKNINKSKKIIKLEKKLRHEQKCLSRKYEQLKNNK KGESTHKNILKQIAKVQKTHLKLSNIRTDYINKIINELVKTKPAYIVIENLNISGMIKNRYLSKSISNQRFYEFRQKLFN KCNFHGIELRIADRFYPSSKTCHSCGSIKKDLKLSDRIYKCPTCGEIIDRDLNASLNLRDTTSYKIA
Sequences:
>Translated_387_residues MLITYKTEIKPNPEQVIKIKQTMGVCRFIYNFYIVENQKAYKNNMPFITAFNFSKWLNNVFIPNNLNYSWIRDVSSKSVK QSIVCAERAFKRFFKKESKFPRFKKKNKSNVKMYFVRNNKGDCLCERHRIKIPTLGWIKIKEKGYIPTSKDDYVVKSGAI SYKAGRYYISCLVDIEEPPKQILKPFGLGIDLGLEKFAVISNGNVYKNINKSKKIIKLEKKLRHEQKCLSRKYEQLKNNK KGESTHKNILKQIAKVQKTHLKLSNIRTDYINKIINELVKTKPAYIVIENLNISGMIKNRYLSKSISNQRFYEFRQKLFN KCNFHGIELRIADRFYPSSKTCHSCGSIKKDLKLSDRIYKCPTCGEIIDRDLNASLNLRDTTSYKIA >Mature_387_residues MLITYKTEIKPNPEQVIKIKQTMGVCRFIYNFYIVENQKAYKNNMPFITAFNFSKWLNNVFIPNNLNYSWIRDVSSKSVK QSIVCAERAFKRFFKKESKFPRFKKKNKSNVKMYFVRNNKGDCLCERHRIKIPTLGWIKIKEKGYIPTSKDDYVVKSGAI SYKAGRYYISCLVDIEEPPKQILKPFGLGIDLGLEKFAVISNGNVYKNINKSKKIIKLEKKLRHEQKCLSRKYEQLKNNK KGESTHKNILKQIAKVQKTHLKLSNIRTDYINKIINELVKTKPAYIVIENLNISGMIKNRYLSKSISNQRFYEFRQKLFN KCNFHGIELRIADRFYPSSKTCHSCGSIKKDLKLSDRIYKCPTCGEIIDRDLNASLNLRDTTSYKIA
Specific function: Required for the transposition of the insertion element (Potential) [H]
COG id: COG0675
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the transposase 35 family [H]
Homologues:
Organism=Escherichia coli, GI288549314, Length=375, Percent_Identity=30.1333333333333, Blast_Score=155, Evalue=3e-39,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001959 - InterPro: IPR010095 - InterPro: IPR021027 [H]
Pfam domain/function: PF12323 HTH_14; PF01385 Transposase_2; PF07282 Transposase_35 [H]
EC number: NA
Molecular weight: Translated: 45379; Mature: 45379
Theoretical pI: Translated: 10.52; Mature: 10.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLITYKTEIKPNPEQVIKIKQTMGVCRFIYNFYIVENQKAYKNNMPFITAFNFSKWLNNV CEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHEEEECCHHHHCCCCEEEEECHHHHHCCE FIPNNLNYSWIRDVSSKSVKQSIVCAERAFKRFFKKESKFPRFKKKNKSNVKMYFVRNNK ECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCEEEEEEECCC GDCLCERHRIKIPTLGWIKIKEKGYIPTSKDDYVVKSGAISYKAGRYYISCLVDIEEPPK CCEEEECCEEECCCCEEEEEECCCCCCCCCCCEEEECCCEEEECCCEEEEEEEECCCCHH QILKPFGLGIDLGLEKFAVISNGNVYKNINKSKKIIKLEKKLRHEQKCLSRKYEQLKNNK HHHHHHCCCEECCCCEEEEEECCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC KGESTHKNILKQIAKVQKTHLKLSNIRTDYINKIINELVKTKPAYIVIENLNISGMIKNR CCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEEEECCCCEEEHHHH YLSKSISNQRFYEFRQKLFNKCNFHGIELRIADRFYPSSKTCHSCGSIKKDLKLSDRIYK HHHHHHCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCEEE CPTCGEIIDRDLNASLNLRDTTSYKIA CCCHHHHHCCCCCCCEEECCCCCEECC >Mature Secondary Structure MLITYKTEIKPNPEQVIKIKQTMGVCRFIYNFYIVENQKAYKNNMPFITAFNFSKWLNNV CEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHEEEECCHHHHCCCCEEEEECHHHHHCCE FIPNNLNYSWIRDVSSKSVKQSIVCAERAFKRFFKKESKFPRFKKKNKSNVKMYFVRNNK ECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCEEEEEEECCC GDCLCERHRIKIPTLGWIKIKEKGYIPTSKDDYVVKSGAISYKAGRYYISCLVDIEEPPK CCEEEECCEEECCCCEEEEEECCCCCCCCCCCEEEECCCEEEECCCEEEEEEEECCCCHH QILKPFGLGIDLGLEKFAVISNGNVYKNINKSKKIIKLEKKLRHEQKCLSRKYEQLKNNK HHHHHHCCCEECCCCEEEEEECCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC KGESTHKNILKQIAKVQKTHLKLSNIRTDYINKIINELVKTKPAYIVIENLNISGMIKNR CCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEEEECCCCEEEHHHH YLSKSISNQRFYEFRQKLFNKCNFHGIELRIADRFYPSSKTCHSCGSIKKDLKLSDRIYK HHHHHHCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCEEE CPTCGEIIDRDLNASLNLRDTTSYKIA CCCHHHHHCCCCCCCEEECCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9097039; 9278503 [H]