Definition | Finegoldia magna ATCC 29328 plasmid pFMC, complete sequence. |
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Accession | NC_010371 |
Length | 189,163 |
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The map label for this gene is cbbX [H]
Identifier: 169823651
GI number: 169823651
Start: 125958
End: 127499
Strand: Reverse
Name: cbbX [H]
Synonym: FMG_P0137
Alternate gene names: 169823651
Gene position: 127499-125958 (Counterclockwise)
Preceding gene: 169823652
Following gene: 169823650
Centisome position: 67.4
GC content: 31.45
Gene sequence:
>1542_bases GTGAGCGTAGATTTAGCAACAGAATTAAGAGAATATACAAAACTAGATTATAAAGGTAATAATTGCTACAAAATAAGAGC GAGATTAATTAGACAATTAAAAGAAGGTAAAGATATAGAAAAAGATAATATATTGGATTCTGAAAGAACTGGCAATGGTT TATATCTTAAACCTGCTTTTCTTAGTAATATGGCATTTAAGGTCAATTACAAAGAAATAAACAGAGCATTAGAAACTGAT GATAAAGTTCAGGATTATCAAGCTGTTGAGCTCAAAGTACAGCCTAAATATGCCACAGTAAAAGCTATTATTAAAGGTGA AACTAAAGAAGATCAAAGGGCTATAAGTTCTATTAGCACATATGAAAAATATAATGTTGGATTTAATTCTAATTTTGACA GGGGAAATTCACTATTGAAATTAGAGTTTTTCGACAAATCAGTAAATGAGAATGACAAGGATCTTGACGATAGAGTTCTT TTTGCGATTTACTTAGTTCCTGTAAAAGAGAATCTAATTTCACAATCAAAGGTTGGATTTTTTAAGTATGTTAAGACTAT GGAATTTGTATTTGCAATGAGAGTAGATTTCTCATTGATTAGCGAAAAGGTAGAAAATAGTGATGGTATTATCTATAAGA CAGAGTTAAAAGCTGTTAAGGATATAAACCAACAAAAAAATAAAGATAAGGAGCTTGAAAAAGATATGACAGGTCTTGAT ATTTACGAAGGTTCTCAAAATCCAGAAGAAACGCTTAATTCTTTAATTGGATTAGGAGAAGTAAAAACACAAATAGAGAC ATTTAAAAACAGAATAATGTTCCAAAATAAGATGAAACAACTAGGTAACGATCAACTTACTTCAGGCTTTAATAATCACA TGATATTCTACGGGGAACCAGGTACTGGTAAAACAACTGTTGCTAGAATTATAGCAGGGTTATTATACAAATTAGGCATA ACTAGAAAGAATAGATGCGTTCAAGTTAATGGTGAATCGTTAAAGGCTGAATATGTAGGTCAAACAGCACCAAAAGTACA AAAGGTTATAGATGCAGCAGTAGGTGGGGTATTATTTATAGACGAAGCTTACGCACTAAATGATGTTCATTACGGTAAAG AAGCTGTAAATGTTCTTTTGCAAAACATGGAAGATAAAAAAGATGATTTAGTAATCATTCTAGCAGGTTATGAAAATGAT ATGCAAGACCTTATGAATGTTAACCCGGGTTTGAAATCAAGAATAGGTTATTGGATTAAGTTTGAAAGCTATAATGCAAA TGAGCTTCTTGATATATTCAAGTTTTCACTTAAGAAGAAAGGTCTTGGTCTAAGCAGTGACTGTGAAAAGCCGTTATTAT ATGTATTAGATCAATATCACAAGATGGGTAAAACAACGGGGGTTGCTGGTAATGCGAGATTCATAAATAAAATGGTTAAT GACATCATCGACAATCACGCTAAAAACTGTATGTCAGGCGTTATTCCTGAAAGTGGTTTCATGGATATCCAAATAGTTGA TCTAAAGGATTATATGCAATAA
Upstream 100 bases:
>100_bases GGTACATATATTAGAAAAATCGATATATTTGTGTGTGGGAATTTTTCCGATATTAAACATACAAAATAAAATACAATAAT TAAAATGGGTGGTGAATTAA
Downstream 100 bases:
>100_bases TAGTTTCACAAAACAAAGATAGAGTAAAGTTCAACGACTATCCATCGTGAGCGGAGTAGGATACAAGCTATAGGTATTTG AAGTGGTTTCGCCTAAACAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 513; Mature: 512
Protein sequence:
>513_residues MSVDLATELREYTKLDYKGNNCYKIRARLIRQLKEGKDIEKDNILDSERTGNGLYLKPAFLSNMAFKVNYKEINRALETD DKVQDYQAVELKVQPKYATVKAIIKGETKEDQRAISSISTYEKYNVGFNSNFDRGNSLLKLEFFDKSVNENDKDLDDRVL FAIYLVPVKENLISQSKVGFFKYVKTMEFVFAMRVDFSLISEKVENSDGIIYKTELKAVKDINQQKNKDKELEKDMTGLD IYEGSQNPEETLNSLIGLGEVKTQIETFKNRIMFQNKMKQLGNDQLTSGFNNHMIFYGEPGTGKTTVARIIAGLLYKLGI TRKNRCVQVNGESLKAEYVGQTAPKVQKVIDAAVGGVLFIDEAYALNDVHYGKEAVNVLLQNMEDKKDDLVIILAGYEND MQDLMNVNPGLKSRIGYWIKFESYNANELLDIFKFSLKKKGLGLSSDCEKPLLYVLDQYHKMGKTTGVAGNARFINKMVN DIIDNHAKNCMSGVIPESGFMDIQIVDLKDYMQ
Sequences:
>Translated_513_residues MSVDLATELREYTKLDYKGNNCYKIRARLIRQLKEGKDIEKDNILDSERTGNGLYLKPAFLSNMAFKVNYKEINRALETD DKVQDYQAVELKVQPKYATVKAIIKGETKEDQRAISSISTYEKYNVGFNSNFDRGNSLLKLEFFDKSVNENDKDLDDRVL FAIYLVPVKENLISQSKVGFFKYVKTMEFVFAMRVDFSLISEKVENSDGIIYKTELKAVKDINQQKNKDKELEKDMTGLD IYEGSQNPEETLNSLIGLGEVKTQIETFKNRIMFQNKMKQLGNDQLTSGFNNHMIFYGEPGTGKTTVARIIAGLLYKLGI TRKNRCVQVNGESLKAEYVGQTAPKVQKVIDAAVGGVLFIDEAYALNDVHYGKEAVNVLLQNMEDKKDDLVIILAGYEND MQDLMNVNPGLKSRIGYWIKFESYNANELLDIFKFSLKKKGLGLSSDCEKPLLYVLDQYHKMGKTTGVAGNARFINKMVN DIIDNHAKNCMSGVIPESGFMDIQIVDLKDYMQ >Mature_512_residues SVDLATELREYTKLDYKGNNCYKIRARLIRQLKEGKDIEKDNILDSERTGNGLYLKPAFLSNMAFKVNYKEINRALETDD KVQDYQAVELKVQPKYATVKAIIKGETKEDQRAISSISTYEKYNVGFNSNFDRGNSLLKLEFFDKSVNENDKDLDDRVLF AIYLVPVKENLISQSKVGFFKYVKTMEFVFAMRVDFSLISEKVENSDGIIYKTELKAVKDINQQKNKDKELEKDMTGLDI YEGSQNPEETLNSLIGLGEVKTQIETFKNRIMFQNKMKQLGNDQLTSGFNNHMIFYGEPGTGKTTVARIIAGLLYKLGIT RKNRCVQVNGESLKAEYVGQTAPKVQKVIDAAVGGVLFIDEAYALNDVHYGKEAVNVLLQNMEDKKDDLVIILAGYENDM QDLMNVNPGLKSRIGYWIKFESYNANELLDIFKFSLKKKGLGLSSDCEKPLLYVLDQYHKMGKTTGVAGNARFINKMVND IIDNHAKNCMSGVIPESGFMDIQIVDLKDYMQ
Specific function: Seems to be necessary for the expression of RuBisCO [H]
COG id: COG0464
COG function: function code O; ATPases of the AAA+ class
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cbxX/cfxQ family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003593 - InterPro: IPR003959 - InterPro: IPR000641 - InterPro: IPR000470 [H]
Pfam domain/function: PF00004 AAA [H]
EC number: NA
Molecular weight: Translated: 58352; Mature: 58220
Theoretical pI: Translated: 6.56; Mature: 6.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVDLATELREYTKLDYKGNNCYKIRARLIRQLKEGKDIEKDNILDSERTGNGLYLKPAF CCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECHHH LSNMAFKVNYKEINRALETDDKVQDYQAVELKVQPKYATVKAIIKGETKEDQRAISSIST HCCCEEEEEHHHHHHHHCCCCHHCCCEEEEEEECCCHHEEHHHHCCCCCHHHHHHHHHHH YEKYNVGFNSNFDRGNSLLKLEFFDKSVNENDKDLDDRVLFAIYLVPVKENLISQSKVGF HHHCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHEEEEEEEEEHHHHHHHHHHHHH FKYVKTMEFVFAMRVDFSLISEKVENSDGIIYKTELKAVKDINQQKNKDKELEKDMTGLD HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHCCHHHHHHHCCCCCE IYEGSQNPEETLNSLIGLGEVKTQIETFKNRIMFQNKMKQLGNDQLTSGFNNHMIFYGEP EECCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCEEEEECC GTGKTTVARIIAGLLYKLGITRKNRCVQVNGESLKAEYVGQTAPKVQKVIDAAVGGVLFI CCCHHHHHHHHHHHHHHHCCCCCCCEEEECCCCEEHHHCCCCCHHHHHHHHHHHCCEEEE DEAYALNDVHYGKEAVNVLLQNMEDKKDDLVIILAGYENDMQDLMNVNPGLKSRIGYWIK ECCHHHCCHHCCHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHCCCCCHHHHCCEEEE FESYNANELLDIFKFSLKKKGLGLSSDCEKPLLYVLDQYHKMGKTTGVAGNARFINKMVN EECCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH DIIDNHAKNCMSGVIPESGFMDIQIVDLKDYMQ HHHHHHHHHHHHCCCCCCCCEEEEEECHHHHCC >Mature Secondary Structure SVDLATELREYTKLDYKGNNCYKIRARLIRQLKEGKDIEKDNILDSERTGNGLYLKPAF CCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECHHH LSNMAFKVNYKEINRALETDDKVQDYQAVELKVQPKYATVKAIIKGETKEDQRAISSIST HCCCEEEEEHHHHHHHHCCCCHHCCCEEEEEEECCCHHEEHHHHCCCCCHHHHHHHHHHH YEKYNVGFNSNFDRGNSLLKLEFFDKSVNENDKDLDDRVLFAIYLVPVKENLISQSKVGF HHHCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHEEEEEEEEEHHHHHHHHHHHHH FKYVKTMEFVFAMRVDFSLISEKVENSDGIIYKTELKAVKDINQQKNKDKELEKDMTGLD HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHCCHHHHHHHCCCCCE IYEGSQNPEETLNSLIGLGEVKTQIETFKNRIMFQNKMKQLGNDQLTSGFNNHMIFYGEP EECCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCEEEEECC GTGKTTVARIIAGLLYKLGITRKNRCVQVNGESLKAEYVGQTAPKVQKVIDAAVGGVLFI CCCHHHHHHHHHHHHHHHCCCCCCCEEEECCCCEEHHHCCCCCHHHHHHHHHHHCCEEEE DEAYALNDVHYGKEAVNVLLQNMEDKKDDLVIILAGYENDMQDLMNVNPGLKSRIGYWIK ECCHHHCCHHCCHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHCCCCCHHHHCCEEEE FESYNANELLDIFKFSLKKKGLGLSSDCEKPLLYVLDQYHKMGKTTGVAGNARFINKMVN EECCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH DIIDNHAKNCMSGVIPESGFMDIQIVDLKDYMQ HHHHHHHHHHHHCCCCCCCCEEEEEECHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9006018 [H]