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The map label for this gene is atpF

Identifier: 167626203

GI number: 167626203

Start: 5210630

End: 5211100

Strand: Reverse

Name: atpF

Synonym: Shal_4298

Alternate gene names: 167626203

Gene position: 5211100-5210630 (Counterclockwise)

Preceding gene: 167626204

Following gene: 167626202

Centisome position: 99.7

GC content: 42.68

Gene sequence:

>471_bases
ATGAGTATTAACGCTACCCTGCTAGGCCAAGCGATTTCTTTTTTACTCTTTGTGTGGTTTTGCATGAAGTTTGTATGGCC
GCCATTGATGAACGCTATCGAAGAACGCCAGAAGAAAATTGCTGATGGTCTAGCTGATGCAGGACGTGCTGCAAAAGATT
TAGAGTTAGCTCAGGTTAAAGCAACAGAGCAGCTAAAAGACGCTAAAGCAACAGCAAACGAAATCATTGAGCAAGCGAAC
AAACGCAAAGCTCAAATCGTTGATGAAGCAAAAGTTGAAGCCGATACCGAGCGAGCGAAAATTATTGCTCAGGGACACGC
TGAAATTGAAAACGAACGTAATCGCGTGAAAGAAGATCTACGTAAGCAAGTAGCTGCACTGGCTATTGCTGGCGCAGAAA
AAATTCTTGAACGTTCGATTGATGAAGCCGCACACAGTGACATAGTTAATAAACTTGTTGCTGAACTTTAA

Upstream 100 bases:

>100_bases
CTCAATGATTGCAGTTGGTGTTGCATTATTCTTCGTATTCGCTAACCCGTTCTTAGGTCAATTAGCAGGCTAATCGTCCC
CCTTAGAAGGAGTTGTCGTT

Downstream 100 bases:

>100_bases
ATAAGGAGCTTGAGTTATGGCTGAAATAACCACCATCGCTCGTCCTTACGCAAAGGCAGCTTTTGAGTTCGCTCTTGAAC
AGAAAGCAGTAGAGAGTTGG

Product: F0F1 ATP synthase subunit B

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F(0) sector subunit b; ATPase subunit I; F-type ATPase subunit b; F-ATPase subunit b

Number of amino acids: Translated: 156; Mature: 155

Protein sequence:

>156_residues
MSINATLLGQAISFLLFVWFCMKFVWPPLMNAIEERQKKIADGLADAGRAAKDLELAQVKATEQLKDAKATANEIIEQAN
KRKAQIVDEAKVEADTERAKIIAQGHAEIENERNRVKEDLRKQVAALAIAGAEKILERSIDEAAHSDIVNKLVAEL

Sequences:

>Translated_156_residues
MSINATLLGQAISFLLFVWFCMKFVWPPLMNAIEERQKKIADGLADAGRAAKDLELAQVKATEQLKDAKATANEIIEQAN
KRKAQIVDEAKVEADTERAKIIAQGHAEIENERNRVKEDLRKQVAALAIAGAEKILERSIDEAAHSDIVNKLVAEL
>Mature_155_residues
SINATLLGQAISFLLFVWFCMKFVWPPLMNAIEERQKKIADGLADAGRAAKDLELAQVKATEQLKDAKATANEIIEQANK
RKAQIVDEAKVEADTERAKIIAQGHAEIENERNRVKEDLRKQVAALAIAGAEKILERSIDEAAHSDIVNKLVAEL

Specific function: Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)

COG id: COG0711

COG function: function code C; F0F1-type ATP synthase, subunit b

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase B chain family

Homologues:

Organism=Escherichia coli, GI1790174, Length=156, Percent_Identity=72.4358974358974, Blast_Score=226, Evalue=8e-61,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ATPF_SHEHH (B0TQF8)

Other databases:

- EMBL:   CP000931
- RefSeq:   YP_001676497.1
- ProteinModelPortal:   B0TQF8
- GeneID:   5905238
- GenomeReviews:   CP000931_GR
- KEGG:   shl:Shal_4298
- HOGENOM:   HBG617328
- OMA:   NPGLIFW
- ProtClustDB:   PRK05759
- BioCyc:   SHAL458817:SHAL_4298-MONOMER
- HAMAP:   MF_01398
- InterPro:   IPR002146
- InterPro:   IPR005864
- TIGRFAMs:   TIGR01144

Pfam domain/function: PF00430 ATP-synt_B

EC number: 3.6.3.14

Molecular weight: Translated: 17260; Mature: 17129

Theoretical pI: Translated: 5.39; Mature: 5.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x12a5bccc)-;

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSINATLLGQAISFLLFVWFCMKFVWPPLMNAIEERQKKIADGLADAGRAAKDLELAQVK
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
ATEQLKDAKATANEIIEQANKRKAQIVDEAKVEADTERAKIIAQGHAEIENERNRVKEDL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RKQVAALAIAGAEKILERSIDEAAHSDIVNKLVAEL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
>Mature Secondary Structure 
SINATLLGQAISFLLFVWFCMKFVWPPLMNAIEERQKKIADGLADAGRAAKDLELAQVK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
ATEQLKDAKATANEIIEQANKRKAQIVDEAKVEADTERAKIIAQGHAEIENERNRVKEDL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RKQVAALAIAGAEKILERSIDEAAHSDIVNKLVAEL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: Borate; diphosphate; HCO3- [C]

Metal ions: Co2+; Fe2+; Mn2+; Zn2+ [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: Phosphorous acid anhydride hydrolysis [C]

Inhibitor: Ca2+; CN-; Efrapeptin; Ethidiumbromide; Guanidines analogs; Oligomycin; Quercetin; Trialkyl tin derivatives; Venturicidin [C]

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA