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The map label for this gene is yafS [H]

Identifier: 167623802

GI number: 167623802

Start: 2246025

End: 2246765

Strand: Direct

Name: yafS [H]

Synonym: Shal_1872

Alternate gene names: 167623802

Gene position: 2246025-2246765 (Clockwise)

Preceding gene: 167623799

Following gene: 167623803

Centisome position: 42.97

GC content: 43.86

Gene sequence:

>741_bases
TTGTCACAGTCTGAATTACCGTTAAAGCCTTATCATTGGTCAGAACTTCCCAATGGCCCTGTCATTCGTCAAAGTGTCGA
GCAGGCATTATCTCCTTGGTGGCCAAGAATTTTTGGTTATTACATGCTAAACCTTGGCCCTTTGAGCCATAAAATAGACA
AGATAGGGGTGGGGATCAGTAAGCAATATTCTTTATTTGATCAGCCGCAGGCGAGCATTGAAGGCGACTATAGTCATTTG
CCGATACAAAATATTAGTATCGATGCCGTAGTGATGAACTTTATTTTAGAGTTTGAGGCAGACCCTTATCGTTTACTTCG
GGAGGTCGATAGGGTGCTTATTTCGGGAGGGCATTTAGTTATTACAGGCTTTAACCCTCTGAGTCCGATGTTTGTCGGAA
AAATGTTGCCTAAACACCAGCAAGAGATCCCTTGGAATGGACGCTTCTTTATGCCATCACGGGTAAAAGACTGGCTAGGG
TTGCTAGGTTATCAAGTGGTCGCCGATGAACGTTTATTGCACCATCATCTGCTAACAGAAGCAAAGATTAATAATATTTG
GTCTCATGCGCTTAAGTCTTGGTTACCCAGTATCGGCAGTATTTATGTCCTAGTGGCTAAAAAATTAGAAACACCATTAA
CGCCTATACAAGCAAGACGTAAAGTTAAGCAGCGTAATTGGTCTACAGCGCCCAGTGCCGGACGCGCGGGCCATGCGTCT
AACACTCACCACAGTAAGTAA

Upstream 100 bases:

>100_bases
TCTAATTTATTTGAGCGTTTAAACAAGTTTACTGACCAAAGCTGTTGCTTGTATACCGCTTTCGTTATTAAAGTAAGCAA
GAGTGTTTTTGGAGGTCGAT

Downstream 100 bases:

>100_bases
AAGAATTAATCACCTTCAAATTAATATTAAAGAGTCTTGATGCGTATAACATTAAAACAGTTGGCCATTTTTGAAGCGGT
TGCTCGAAGTGGACAAGTTG

Product: type 11 methyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 246; Mature: 245

Protein sequence:

>246_residues
MSQSELPLKPYHWSELPNGPVIRQSVEQALSPWWPRIFGYYMLNLGPLSHKIDKIGVGISKQYSLFDQPQASIEGDYSHL
PIQNISIDAVVMNFILEFEADPYRLLREVDRVLISGGHLVITGFNPLSPMFVGKMLPKHQQEIPWNGRFFMPSRVKDWLG
LLGYQVVADERLLHHHLLTEAKINNIWSHALKSWLPSIGSIYVLVAKKLETPLTPIQARRKVKQRNWSTAPSAGRAGHAS
NTHHSK

Sequences:

>Translated_246_residues
MSQSELPLKPYHWSELPNGPVIRQSVEQALSPWWPRIFGYYMLNLGPLSHKIDKIGVGISKQYSLFDQPQASIEGDYSHL
PIQNISIDAVVMNFILEFEADPYRLLREVDRVLISGGHLVITGFNPLSPMFVGKMLPKHQQEIPWNGRFFMPSRVKDWLG
LLGYQVVADERLLHHHLLTEAKINNIWSHALKSWLPSIGSIYVLVAKKLETPLTPIQARRKVKQRNWSTAPSAGRAGHAS
NTHHSK
>Mature_245_residues
SQSELPLKPYHWSELPNGPVIRQSVEQALSPWWPRIFGYYMLNLGPLSHKIDKIGVGISKQYSLFDQPQASIEGDYSHLP
IQNISIDAVVMNFILEFEADPYRLLREVDRVLISGGHLVITGFNPLSPMFVGKMLPKHQQEIPWNGRFFMPSRVKDWLGL
LGYQVVADERLLHHHLLTEAKINNIWSHALKSWLPSIGSIYVLVAKKLETPLTPIQARRKVKQRNWSTAPSAGRAGHASN
THHSK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081700, Length=208, Percent_Identity=35.5769230769231, Blast_Score=136, Evalue=2e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013216 [H]

Pfam domain/function: PF08241 Methyltransf_11 [H]

EC number: NA

Molecular weight: Translated: 28009; Mature: 27878

Theoretical pI: Translated: 10.06; Mature: 10.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQSELPLKPYHWSELPNGPVIRQSVEQALSPWWPRIFGYYMLNLGPLSHKIDKIGVGIS
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHCCCCC
KQYSLFDQPQASIEGDYSHLPIQNISIDAVVMNFILEFEADPYRLLREVDRVLISGGHLV
CCCHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEE
ITGFNPLSPMFVGKMLPKHQQEIPWNGRFFMPSRVKDWLGLLGYQVVADERLLHHHLLTE
EECCCCCCHHHHHHHCCHHHHCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AKINNIWSHALKSWLPSIGSIYVLVAKKLETPLTPIQARRKVKQRNWSTAPSAGRAGHAS
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCC
NTHHSK
CCCCCC
>Mature Secondary Structure 
SQSELPLKPYHWSELPNGPVIRQSVEQALSPWWPRIFGYYMLNLGPLSHKIDKIGVGIS
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHCCCCC
KQYSLFDQPQASIEGDYSHLPIQNISIDAVVMNFILEFEADPYRLLREVDRVLISGGHLV
CCCHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEE
ITGFNPLSPMFVGKMLPKHQQEIPWNGRFFMPSRVKDWLGLLGYQVVADERLLHHHLLTE
EECCCCCCHHHHHHHCCHHHHCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AKINNIWSHALKSWLPSIGSIYVLVAKKLETPLTPIQARRKVKQRNWSTAPSAGRAGHAS
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCC
NTHHSK
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]