Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
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Accession | NC_010334 |
Length | 5,226,917 |
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The map label for this gene is 167623799
Identifier: 167623799
GI number: 167623799
Start: 2242743
End: 2243315
Strand: Direct
Name: 167623799
Synonym: Shal_1869
Alternate gene names: NA
Gene position: 2242743-2243315 (Clockwise)
Preceding gene: 167623798
Following gene: 167623802
Centisome position: 42.91
GC content: 48.52
Gene sequence:
>573_bases ATGCTCAATCCGCTCCTTCTCTCTCTGGCCGTTTTTGGCTTGATGGGCTGCTCCAGCCAGCAAGCTGAAGCCGCGAAAGT TGAAACGACTACCACGCCAAAAACGCTGCCGAGCCAAATACAGCAGCCTCAAGTGCAGCCCATTAAGGTATTACCAACGG GTATTGTGGGCGGCGGAAGTGCTGGAGACAGGGTGTCAATAAAGGATAAAGCGATGAGTCAGGGATTGTTAGATGCCAAG CTTGTGGTAACTGATAAAGCGAATATTACGCTGCAATATACCAATAACCAAAGCTATGGGGTTCCACTCATGTTTGCGTC AGGGATGACTGCCGATCTATGGCTGCTCGATCCTACGGGTCATAAAGTCTGGGCTTGGTCGAACGAGATGATGTTTACCC AAGCGCTACGAGAAACCGTGATGCCAGCGGGTAAGACTCAAAATGTGAAGTTTACTATCCCGACGAAAGTGGCAGCAAAA ATCACTAAAGGCTATAGCTTAAAGGCAATTTTTGCAGGCAGAGCGACGGAATCTCAAAGCCCAGCTATGCTACCAGTGAC TTACTATTATTGA
Upstream 100 bases:
>100_bases CCAAATTTGCCTTAGATACGAAAGCACTGCTCGACTCGAAACTAAAAGATGAAACCAATAAGTTGAAAGACAGTTTACTC AAGAAATTTGGAGGTTTTTG
Downstream 100 bases:
>100_bases GTATCATCGTAGTACGAGGTGACTCATTCTAATCCTTAATGTAAACGTATTTAAGGAGAGATAGCTTTAGTAGCAAAAAA GGCGACCACTTGGTCGCCTT
Product: intracellular proteinase inhibitor domain-containing protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 190; Mature: 190
Protein sequence:
>190_residues MLNPLLLSLAVFGLMGCSSQQAEAAKVETTTTPKTLPSQIQQPQVQPIKVLPTGIVGGGSAGDRVSIKDKAMSQGLLDAK LVVTDKANITLQYTNNQSYGVPLMFASGMTADLWLLDPTGHKVWAWSNEMMFTQALRETVMPAGKTQNVKFTIPTKVAAK ITKGYSLKAIFAGRATESQSPAMLPVTYYY
Sequences:
>Translated_190_residues MLNPLLLSLAVFGLMGCSSQQAEAAKVETTTTPKTLPSQIQQPQVQPIKVLPTGIVGGGSAGDRVSIKDKAMSQGLLDAK LVVTDKANITLQYTNNQSYGVPLMFASGMTADLWLLDPTGHKVWAWSNEMMFTQALRETVMPAGKTQNVKFTIPTKVAAK ITKGYSLKAIFAGRATESQSPAMLPVTYYY >Mature_190_residues MLNPLLLSLAVFGLMGCSSQQAEAAKVETTTTPKTLPSQIQQPQVQPIKVLPTGIVGGGSAGDRVSIKDKAMSQGLLDAK LVVTDKANITLQYTNNQSYGVPLMFASGMTADLWLLDPTGHKVWAWSNEMMFTQALRETVMPAGKTQNVKFTIPTKVAAK ITKGYSLKAIFAGRATESQSPAMLPVTYYY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20473; Mature: 20473
Theoretical pI: Translated: 9.93; Mature: 9.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNPLLLSLAVFGLMGCSSQQAEAAKVETTTTPKTLPSQIQQPQVQPIKVLPTGIVGGGS CCCHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCHHHHCCCCCCEEEEEECCEECCCC AGDRVSIKDKAMSQGLLDAKLVVTDKANITLQYTNNQSYGVPLMFASGMTADLWLLDPTG CCCEEEEHHHHHHCCCCEEEEEEECCCCEEEEEECCCCCCCEEEEECCCCEEEEEECCCC HKVWAWSNEMMFTQALRETVMPAGKTQNVKFTIPTKVAAKITKGYSLKAIFAGRATESQS CEEEEECCCHHHHHHHHHHHCCCCCCCCEEEEECHHHHHHHHCCCEEEEEEECCCCCCCC PAMLPVTYYY CCEEEEEEEC >Mature Secondary Structure MLNPLLLSLAVFGLMGCSSQQAEAAKVETTTTPKTLPSQIQQPQVQPIKVLPTGIVGGGS CCCHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCHHHHCCCCCCEEEEEECCEECCCC AGDRVSIKDKAMSQGLLDAKLVVTDKANITLQYTNNQSYGVPLMFASGMTADLWLLDPTG CCCEEEEHHHHHHCCCCEEEEEEECCCCEEEEEECCCCCCCEEEEECCCCEEEEEECCCC HKVWAWSNEMMFTQALRETVMPAGKTQNVKFTIPTKVAAKITKGYSLKAIFAGRATESQS CEEEEECCCHHHHHHHHHHHCCCCCCCCEEEEECHHHHHHHHCCCEEEEEEECCCCCCCC PAMLPVTYYY CCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA