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The map label for this gene is yedY [H]

Identifier: 167623794

GI number: 167623794

Start: 2237691

End: 2238713

Strand: Direct

Name: yedY [H]

Synonym: Shal_1864

Alternate gene names: 167623794

Gene position: 2237691-2238713 (Clockwise)

Preceding gene: 167623783

Following gene: 167623795

Centisome position: 42.81

GC content: 43.99

Gene sequence:

>1023_bases
ATGAATATAAAAACAACTGCTGCTTGGGATAAGTTCAAAGAGAGCGATATTACCCCTGAAGAGGTGTATCAAGACCGCAG
ACGGATCCTACAGCAGATGGGCTTTTTAGGTGCTGGTGCGCTGTTATCCTCCAGCGCTAATGCTGGGGTGTTTGACATTT
TTTCTAATGATGAGCAAAAAGCGGCATTTTTGACTAAAGCGTTGCCTTTCGCTAAGCAAGCTGACTATGACCATCTGCTC
TATGGGGCGTTAACTCCTGAGTCCAAAATTATTTCCCACAATAATTTTTATGAATTTGGCACCAGCAAGACCGATCCACA
AGAAAATGCCCAAGATCTCAAGGTTCAACCGTGGAAGCTGGTTATTGACGGAGAGGTTGATAACGCCATGACACTGGATT
TTGATGACTTACTCAACCTTTTTCCATTAGAAGAGCGTGCTTATAACTTTCGTTGTGTAGAGGCTTGGTCAATGGTGATC
CCATGGGTCGGTTTTTCATTGGCCAACTTACTAAAAAAAGTCGGAGTTAACAGTAAGGCTAAGTATGTGGCCTTTGAGAC
CTTATATGATCCAGAGCAGATGCCAGGTCAAAAGAGTCGGTATGCAGGGGGAGGGATTAATTATCCTTATGTAGAGGGAT
TAACCTTAGCCGAAGCGATGAATGACTTAACCTTTCTGTCCGTTGGGCTTTATGGAAAAACATTACCGCCACAAAATGGT
GCGCCAATCCGCCTTGTTGTACCGTGGAAGTATGGCTTTAAGAGTATCAAGTCGATAGTACGTATTCGCCTAACCGACAA
ACAGCCGCCAACCTCTTGGAACCAACTCGCTGCCAGTGAATATGGATTTTATGCCAATGTTAACCCTGAGGTTGACCACC
CTAGATGGTCGCAAGCATCAGAGCGTCGAATTGCTGAGGGGGGACTCTTCTCGGCAAAACGTATTGCGACGTTACCTTTT
AATGGTTATGGCGATATTGTGTCAGATCTTTACAAGGGGATGAATTTAAAAAAATTCTATTAA

Upstream 100 bases:

>100_bases
TGTATGTAACATTTTTGCGAGTTTGAAACCTTTCTTCGACTTTGTCGGTCTGATTAGTTAACAACACTAAATTGATATGA
AAATAGGATGGATGCGGCTA

Downstream 100 bases:

>100_bases
ATATGCTTGGATGTTTGTGTAGAACACTCGGTAAAAAGAGTTGGTAATGGCTTGGTTGGAGAATTTTATGCGTTTAAATA
GCCGTTCTGTATTTTGGTTA

Product: putative sulfite oxidase subunit YedY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 340; Mature: 340

Protein sequence:

>340_residues
MNIKTTAAWDKFKESDITPEEVYQDRRRILQQMGFLGAGALLSSSANAGVFDIFSNDEQKAAFLTKALPFAKQADYDHLL
YGALTPESKIISHNNFYEFGTSKTDPQENAQDLKVQPWKLVIDGEVDNAMTLDFDDLLNLFPLEERAYNFRCVEAWSMVI
PWVGFSLANLLKKVGVNSKAKYVAFETLYDPEQMPGQKSRYAGGGINYPYVEGLTLAEAMNDLTFLSVGLYGKTLPPQNG
APIRLVVPWKYGFKSIKSIVRIRLTDKQPPTSWNQLAASEYGFYANVNPEVDHPRWSQASERRIAEGGLFSAKRIATLPF
NGYGDIVSDLYKGMNLKKFY

Sequences:

>Translated_340_residues
MNIKTTAAWDKFKESDITPEEVYQDRRRILQQMGFLGAGALLSSSANAGVFDIFSNDEQKAAFLTKALPFAKQADYDHLL
YGALTPESKIISHNNFYEFGTSKTDPQENAQDLKVQPWKLVIDGEVDNAMTLDFDDLLNLFPLEERAYNFRCVEAWSMVI
PWVGFSLANLLKKVGVNSKAKYVAFETLYDPEQMPGQKSRYAGGGINYPYVEGLTLAEAMNDLTFLSVGLYGKTLPPQNG
APIRLVVPWKYGFKSIKSIVRIRLTDKQPPTSWNQLAASEYGFYANVNPEVDHPRWSQASERRIAEGGLFSAKRIATLPF
NGYGDIVSDLYKGMNLKKFY
>Mature_340_residues
MNIKTTAAWDKFKESDITPEEVYQDRRRILQQMGFLGAGALLSSSANAGVFDIFSNDEQKAAFLTKALPFAKQADYDHLL
YGALTPESKIISHNNFYEFGTSKTDPQENAQDLKVQPWKLVIDGEVDNAMTLDFDDLLNLFPLEERAYNFRCVEAWSMVI
PWVGFSLANLLKKVGVNSKAKYVAFETLYDPEQMPGQKSRYAGGGINYPYVEGLTLAEAMNDLTFLSVGLYGKTLPPQNG
APIRLVVPWKYGFKSIKSIVRIRLTDKQPPTSWNQLAASEYGFYANVNPEVDHPRWSQASERRIAEGGLFSAKRIATLPF
NGYGDIVSDLYKGMNLKKFY

Specific function: The exact function is not known. Can catalyze the reduction of a variety of substrates like dimethyl sulfoxide, trimethylamine N-oxide, phenylmethyl sulfoxide and L-methionine sulfoxide. Cannot reduce cyclic N-oxides. Shows no activity as sulfite oxidase

COG id: COG2041

COG function: function code R; Sulfite oxidase and related enzymes

Gene ontology:

Cell location: Periplasm. Note=Is attached to the inner membrane when interacting with the yedZ subunit (By similarity) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yedY family [H]

Homologues:

Organism=Escherichia coli, GI1788282, Length=328, Percent_Identity=56.0975609756098, Blast_Score=378, Evalue=1e-106,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000572
- InterPro:   IPR006311
- InterPro:   IPR022867 [H]

Pfam domain/function: PF00174 Oxidored_molyb [H]

EC number: NA

Molecular weight: Translated: 38269; Mature: 38269

Theoretical pI: Translated: 6.31; Mature: 6.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIKTTAAWDKFKESDITPEEVYQDRRRILQQMGFLGAGALLSSSANAGVFDIFSNDEQK
CCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCEEEEECCCCHH
AAFLTKALPFAKQADYDHLLYGALTPESKIISHNNFYEFGTSKTDPQENAQDLKVQPWKL
HHHHHHHCCCHHCCCCCCEEEEECCCCHHEECCCCEEECCCCCCCCCCCCCCCCCCCEEE
VIDGEVDNAMTLDFDDLLNLFPLEERAYNFRCVEAWSMVIPWVGFSLANLLKKVGVNSKA
EEECCCCCEEEECHHHHHHHCCCHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
KYVAFETLYDPEQMPGQKSRYAGGGINYPYVEGLTLAEAMNDLTFLSVGLYGKTLPPQNG
EEEEEEECCCHHHCCCCCCCCCCCCCCCCHHCCCHHHHHHCCCEEEEECCCCCCCCCCCC
APIRLVVPWKYGFKSIKSIVRIRLTDKQPPTSWNQLAASEYGFYANVNPEVDHPRWSQAS
CCEEEEECCHHHHHHHHHHHEEEECCCCCCCCHHHHHHHHCCEEEECCCCCCCCCCCCHH
ERRIAEGGLFSAKRIATLPFNGYGDIVSDLYKGMNLKKFY
HHHHHCCCCCCCCEEEECCCCCCHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MNIKTTAAWDKFKESDITPEEVYQDRRRILQQMGFLGAGALLSSSANAGVFDIFSNDEQK
CCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCEEEEECCCCHH
AAFLTKALPFAKQADYDHLLYGALTPESKIISHNNFYEFGTSKTDPQENAQDLKVQPWKL
HHHHHHHCCCHHCCCCCCEEEEECCCCHHEECCCCEEECCCCCCCCCCCCCCCCCCCEEE
VIDGEVDNAMTLDFDDLLNLFPLEERAYNFRCVEAWSMVIPWVGFSLANLLKKVGVNSKA
EEECCCCCEEEECHHHHHHHCCCHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
KYVAFETLYDPEQMPGQKSRYAGGGINYPYVEGLTLAEAMNDLTFLSVGLYGKTLPPQNG
EEEEEEECCCHHHCCCCCCCCCCCCCCCCHHCCCHHHHHHCCCEEEEECCCCCCCCCCCC
APIRLVVPWKYGFKSIKSIVRIRLTDKQPPTSWNQLAASEYGFYANVNPEVDHPRWSQAS
CCEEEEECCHHHHHHHHHHHEEEECCCCCCCCHHHHHHHHCCEEEECCCCCCCCCCCCHH
ERRIAEGGLFSAKRIATLPFNGYGDIVSDLYKGMNLKKFY
HHHHHCCCCCCCCEEEECCCCCCHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Mo [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA