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The map label for this gene is intB [H]

Identifier: 167623715

GI number: 167623715

Start: 2136220

End: 2137296

Strand: Direct

Name: intB [H]

Synonym: Shal_1785

Alternate gene names: 167623715

Gene position: 2136220-2137296 (Clockwise)

Preceding gene: 167623712

Following gene: 167623716

Centisome position: 40.87

GC content: 39.65

Gene sequence:

>1077_bases
GTGTTCCAGTACCGTTACAGGTTCGAAGGTAAGGGTAGGCGCTATGATCTTGGGAGTTATCCTAATCTCAGTCTATCAGA
TGCAAGAGCTTGCGTACCAGAGTTGAAGGGGATAACTGAATCAGGAATGGATGTTAAGTCTGTTAAGGCTTCTCAGAAAG
TAGGCAAGAAAACCGTATTAAAACCCAAACTCGAAGATTGCATGGATCTATTCTTAGATAAGTACGTTACAAGCCTCAGG
GAGAGCACTCAGAGGTTTTATCGATACACTTTAAACAAGTACATACCTAACGCATTTGAACAGCCTGTAGAAGATATCAC
GAGGAAAGAGTGGTATGCCTATTTTGATGGGGTGGAAGAATCTTCGACTCCACATATGGCAAACTCTTTGATAAAGAAAT
TAAAGACCTGTTTAAACTTCTGCAAAGAGAGAGATTTGATTTCAGACCATAGCCTCAACGAGATAAGGACTAAAAGTGTA
GGATCTGCTTCCAACACTGGAGACCGTACTCCTTCGGTTGTTGAGATTAAAGCAATCTTAGAAGAATTTGGTCGAAGTAA
ATCCTATCCAACCACTGTTAATGTTGTACGGATGATAGTGTTAACAGGTGCTCGTTGTGGTGAGGTTAGATGTATGCAAT
CTAAGGATATCAATTTCGATACTGGCATTTGGACAGTTCCTAAAGAGAAAAGCAAAACCAATACAAGAATTCTTAGACCT
TTGGGGCTCAAGGCATTGGAACTCGTTAAATGGCAGGTTAAAACATTTGGTGGCTTTTCGGATTATGTTTTTCCTAGTGC
GAGTTACAAAAATGAGATTGGGCCTGCAACTATCAACAAAATGTGTAGAACAATCGTTAAACGTATGGATATTGAAAGGT
GGTCTGTACATGACTTCAGAAGGTCGCTGTCAACATTGCTGACTGAAGATGGAGTACCACTCCATATAACAGAGAAAATG
TTAGGGCATAAGCTTGGAGGGATTCTTAGCGTATATAACAAGAGTGAGTACATAGAAGATCAAAGGAAGGCTTATAAAGT
TTGGGAAGAAATGATTAACGTTGACTTTGTATATTAA

Upstream 100 bases:

>100_bases
TACCAAGCTAAGATCTTTATTAAATAGACCTTGTGAAAAATTAGTTACGATAACTGATAGAGATTCATTAAGCGTTAGAG
TTACCCCTAAAGGGAAAATA

Downstream 100 bases:

>100_bases
TAATTAGTTGTATAAGGATGTAGTTAGAGATGGATATTCAGTCTAAATGTAAACTTGTTTTATTAAGTAGTGTTTTTCTG
ACCTCAATTCAAACGAGTGC

Product: integrase family protein

Products: NA

Alternate protein names: Int(P4) [H]

Number of amino acids: Translated: 358; Mature: 358

Protein sequence:

>358_residues
MFQYRYRFEGKGRRYDLGSYPNLSLSDARACVPELKGITESGMDVKSVKASQKVGKKTVLKPKLEDCMDLFLDKYVTSLR
ESTQRFYRYTLNKYIPNAFEQPVEDITRKEWYAYFDGVEESSTPHMANSLIKKLKTCLNFCKERDLISDHSLNEIRTKSV
GSASNTGDRTPSVVEIKAILEEFGRSKSYPTTVNVVRMIVLTGARCGEVRCMQSKDINFDTGIWTVPKEKSKTNTRILRP
LGLKALELVKWQVKTFGGFSDYVFPSASYKNEIGPATINKMCRTIVKRMDIERWSVHDFRRSLSTLLTEDGVPLHITEKM
LGHKLGGILSVYNKSEYIEDQRKAYKVWEEMINVDFVY

Sequences:

>Translated_358_residues
MFQYRYRFEGKGRRYDLGSYPNLSLSDARACVPELKGITESGMDVKSVKASQKVGKKTVLKPKLEDCMDLFLDKYVTSLR
ESTQRFYRYTLNKYIPNAFEQPVEDITRKEWYAYFDGVEESSTPHMANSLIKKLKTCLNFCKERDLISDHSLNEIRTKSV
GSASNTGDRTPSVVEIKAILEEFGRSKSYPTTVNVVRMIVLTGARCGEVRCMQSKDINFDTGIWTVPKEKSKTNTRILRP
LGLKALELVKWQVKTFGGFSDYVFPSASYKNEIGPATINKMCRTIVKRMDIERWSVHDFRRSLSTLLTEDGVPLHITEKM
LGHKLGGILSVYNKSEYIEDQRKAYKVWEEMINVDFVY
>Mature_358_residues
MFQYRYRFEGKGRRYDLGSYPNLSLSDARACVPELKGITESGMDVKSVKASQKVGKKTVLKPKLEDCMDLFLDKYVTSLR
ESTQRFYRYTLNKYIPNAFEQPVEDITRKEWYAYFDGVEESSTPHMANSLIKKLKTCLNFCKERDLISDHSLNEIRTKSV
GSASNTGDRTPSVVEIKAILEEFGRSKSYPTTVNVVRMIVLTGARCGEVRCMQSKDINFDTGIWTVPKEKSKTNTRILRP
LGLKALELVKWQVKTFGGFSDYVFPSASYKNEIGPATINKMCRTIVKRMDIERWSVHDFRRSLSTLLTEDGVPLHITEKM
LGHKLGGILSVYNKSEYIEDQRKAYKVWEEMINVDFVY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family [H]

Homologues:

Organism=Escherichia coli, GI145693166, Length=355, Percent_Identity=23.3802816901408, Blast_Score=82, Evalue=7e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104
- InterPro:   IPR023109 [H]

Pfam domain/function: PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 41206; Mature: 41206

Theoretical pI: Translated: 9.56; Mature: 9.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFQYRYRFEGKGRRYDLGSYPNLSLSDARACVPELKGITESGMDVKSVKASQKVGKKTVL
CCCEEEEECCCCCEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCHHHCC
KPKLEDCMDLFLDKYVTSLRESTQRFYRYTLNKYIPNAFEQPVEDITRKEWYAYFDGVEE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCC
SSTPHMANSLIKKLKTCLNFCKERDLISDHSLNEIRTKSVGSASNTGDRTPSVVEIKAIL
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHH
EEFGRSKSYPTTVNVVRMIVLTGARCGEVRCMQSKDINFDTGIWTVPKEKSKTNTRILRP
HHHCCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCEEECCCCCCCCHHHHHHH
LGLKALELVKWQVKTFGGFSDYVFPSASYKNEIGPATINKMCRTIVKRMDIERWSVHDFR
HCHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHH
RSLSTLLTEDGVPLHITEKMLGHKLGGILSVYNKSEYIEDQRKAYKVWEEMINVDFVY
HHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MFQYRYRFEGKGRRYDLGSYPNLSLSDARACVPELKGITESGMDVKSVKASQKVGKKTVL
CCCEEEEECCCCCEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCHHHCC
KPKLEDCMDLFLDKYVTSLRESTQRFYRYTLNKYIPNAFEQPVEDITRKEWYAYFDGVEE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCC
SSTPHMANSLIKKLKTCLNFCKERDLISDHSLNEIRTKSVGSASNTGDRTPSVVEIKAIL
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHH
EEFGRSKSYPTTVNVVRMIVLTGARCGEVRCMQSKDINFDTGIWTVPKEKSKTNTRILRP
HHHCCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCEEECCCCCCCCHHHHHHH
LGLKALELVKWQVKTFGGFSDYVFPSASYKNEIGPATINKMCRTIVKRMDIERWSVHDFR
HCHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHH
RSLSTLLTEDGVPLHITEKMLGHKLGGILSVYNKSEYIEDQRKAYKVWEEMINVDFVY
HHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]