Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
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Accession | NC_010334 |
Length | 5,226,917 |
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The map label for this gene is 167623683
Identifier: 167623683
GI number: 167623683
Start: 2100547
End: 2101638
Strand: Direct
Name: 167623683
Synonym: Shal_1752
Alternate gene names: NA
Gene position: 2100547-2101638 (Clockwise)
Preceding gene: 167623682
Following gene: 167623684
Centisome position: 40.19
GC content: 39.65
Gene sequence:
>1092_bases ATGCTTGACCAAATAAAAGAATTCATAAATCCAAGCAAGAATCCTGATTTAAGTCAGGCGCATGAATTTCAGCGTAAACA TCTGCCCACACTTTGGCTAATAGGTAAAACAGGAGCTGGTAAGTCCTCGTTTATTCAAGCCGTAACAGGGCATTCGTCTA TAGAGGTTGGAAATGGATATGCGCCCTGCACAATGACTGCTGAAGTTTATGAATTCCCGCAAGATAAACCCGTTATGCGT TTCTTAGATACAAGAGGCCTAGGGGAAGCTGACTATAATCCAAATGATGATCTTGAAGAGATTAGTGAGTCAGGTAATTC TTTAGTTGTAGTAATGAAAGTTGATGAGTCTGAACAATCTTCAGTCCTCGAGGCCTTAAAGCAGATTAAGAAGAAAAATA AAATCAAACACCTACTTCTTGTTCATAGTGCAGTGCTACTTTCTGGACATAAAGAGCTAGAACGCCAAATTACCTTTAAT GAAAAACAAGTAAAGGGTATCTGGGGTAAGGATTTTGATGCTGTAGCGGTAGATTTTGAAGCTGGTGACGGTTCCGTTTA TAACTATGACGCCTTAATTGAAAAATTGACAAAAATACTCCCAGTTATCGGAATGATGATAGAAGACAAAGAGCGCTCAA CAATTGAAGAAGAGAACTTTGATAAAGTTGAAAATGAAGTGCTTTGGTATGCTGGTAGTGCTTCAGCAAGTGATCTTATT CCCGCGGTTGGATTAGTTTCTGTTCCTGCAATTCAGGCCAAAATGTTGCACAGTTTAGCTAATCAATATGGTGTTGAGTG GAGTACCAGAACTTTCAGCGAATTAATTGGTACGCTTGGTAGCAGTTTTGCATTGCAGTACGGAGTGAAATTAGGTGCTA GGCAGTTAGTTAAGTTTGTTCCTGGATACGGGCAAACAGTTGGTGCTGTGACTGCCGCTGGAGTTAGTTTTGGTACAACT TATGGCTTAGGCAGAGCTGCATGTTTTTACTTTTACCATAAGAGTAAAGGTGAAACTGTTTCAAAGGAAGGCATGCAAAG TTTGTATAAAGACTCTTTTTACAAAGGTAAGGCAGCATCGGGATATGAATAA
Upstream 100 bases:
>100_bases ATCCTCGCTGGAAATATGAGATTGTTAAGTAATGAAGTTTAAAAATGTCATATTTCTTATGTAGAAGGTTTTAATGATTT AGATGGTGGTAAAAATTTCT
Downstream 100 bases:
>100_bases AATTATGAGGTTATATCGCTTACTTTCTGATTTATCAGGCGGTCGTTGGGGAATCGTCTTAATTTCAACCATATTACCAA TATTAATTATGATGGGTTTT
Product: kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 363; Mature: 363
Protein sequence:
>363_residues MLDQIKEFINPSKNPDLSQAHEFQRKHLPTLWLIGKTGAGKSSFIQAVTGHSSIEVGNGYAPCTMTAEVYEFPQDKPVMR FLDTRGLGEADYNPNDDLEEISESGNSLVVVMKVDESEQSSVLEALKQIKKKNKIKHLLLVHSAVLLSGHKELERQITFN EKQVKGIWGKDFDAVAVDFEAGDGSVYNYDALIEKLTKILPVIGMMIEDKERSTIEEENFDKVENEVLWYAGSASASDLI PAVGLVSVPAIQAKMLHSLANQYGVEWSTRTFSELIGTLGSSFALQYGVKLGARQLVKFVPGYGQTVGAVTAAGVSFGTT YGLGRAACFYFYHKSKGETVSKEGMQSLYKDSFYKGKAASGYE
Sequences:
>Translated_363_residues MLDQIKEFINPSKNPDLSQAHEFQRKHLPTLWLIGKTGAGKSSFIQAVTGHSSIEVGNGYAPCTMTAEVYEFPQDKPVMR FLDTRGLGEADYNPNDDLEEISESGNSLVVVMKVDESEQSSVLEALKQIKKKNKIKHLLLVHSAVLLSGHKELERQITFN EKQVKGIWGKDFDAVAVDFEAGDGSVYNYDALIEKLTKILPVIGMMIEDKERSTIEEENFDKVENEVLWYAGSASASDLI PAVGLVSVPAIQAKMLHSLANQYGVEWSTRTFSELIGTLGSSFALQYGVKLGARQLVKFVPGYGQTVGAVTAAGVSFGTT YGLGRAACFYFYHKSKGETVSKEGMQSLYKDSFYKGKAASGYE >Mature_363_residues MLDQIKEFINPSKNPDLSQAHEFQRKHLPTLWLIGKTGAGKSSFIQAVTGHSSIEVGNGYAPCTMTAEVYEFPQDKPVMR FLDTRGLGEADYNPNDDLEEISESGNSLVVVMKVDESEQSSVLEALKQIKKKNKIKHLLLVHSAVLLSGHKELERQITFN EKQVKGIWGKDFDAVAVDFEAGDGSVYNYDALIEKLTKILPVIGMMIEDKERSTIEEENFDKVENEVLWYAGSASASDLI PAVGLVSVPAIQAKMLHSLANQYGVEWSTRTFSELIGTLGSSFALQYGVKLGARQLVKFVPGYGQTVGAVTAAGVSFGTT YGLGRAACFYFYHKSKGETVSKEGMQSLYKDSFYKGKAASGYE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39898; Mature: 39898
Theoretical pI: Translated: 5.67; Mature: 5.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDQIKEFINPSKNPDLSQAHEFQRKHLPTLWLIGKTGAGKSSFIQAVTGHSSIEVGNGY CHHHHHHHHCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHCCCCEEEECCCC APCTMTAEVYEFPQDKPVMRFLDTRGLGEADYNPNDDLEEISESGNSLVVVMKVDESEQS CCCEEEHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCEEEEEEEECCCHHH SVLEALKQIKKKNKIKHLLLVHSAVLLSGHKELERQITFNEKQVKGIWGKDFDAVAVDFE HHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHHHHCCCCCCCCCEEEEEEE AGDGSVYNYDALIEKLTKILPVIGMMIEDKERSTIEEENFDKVENEVLWYAGSASASDLI CCCCCEEEHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCHHHHCCCEEEEECCCCHHHHH PAVGLVSVPAIQAKMLHSLANQYGVEWSTRTFSELIGTLGSSFALQYGVKLGARQLVKFV HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHC PGYGQTVGAVTAAGVSFGTTYGLGRAACFYFYHKSKGETVSKEGMQSLYKDSFYKGKAAS CCCCCHHHHHHHHCHHHCCHHCCHHHHHHHEEECCCCCCHHHHHHHHHHHHHCCCCCCCC GYE CCC >Mature Secondary Structure MLDQIKEFINPSKNPDLSQAHEFQRKHLPTLWLIGKTGAGKSSFIQAVTGHSSIEVGNGY CHHHHHHHHCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHCCCCEEEECCCC APCTMTAEVYEFPQDKPVMRFLDTRGLGEADYNPNDDLEEISESGNSLVVVMKVDESEQS CCCEEEHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCEEEEEEEECCCHHH SVLEALKQIKKKNKIKHLLLVHSAVLLSGHKELERQITFNEKQVKGIWGKDFDAVAVDFE HHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHHHHCCCCCCCCCEEEEEEE AGDGSVYNYDALIEKLTKILPVIGMMIEDKERSTIEEENFDKVENEVLWYAGSASASDLI CCCCCEEEHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCHHHHCCCEEEEECCCCHHHHH PAVGLVSVPAIQAKMLHSLANQYGVEWSTRTFSELIGTLGSSFALQYGVKLGARQLVKFV HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHC PGYGQTVGAVTAAGVSFGTTYGLGRAACFYFYHKSKGETVSKEGMQSLYKDSFYKGKAAS CCCCCHHHHHHHHCHHHCCHHCCHHHHHHHEEECCCCCCHHHHHHHHHHHHHCCCCCCCC GYE CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA