Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
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Accession | NC_010334 |
Length | 5,226,917 |
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The map label for this gene is 167623681
Identifier: 167623681
GI number: 167623681
Start: 2099743
End: 2100126
Strand: Direct
Name: 167623681
Synonym: Shal_1750
Alternate gene names: NA
Gene position: 2099743-2100126 (Clockwise)
Preceding gene: 167623680
Following gene: 167623682
Centisome position: 40.17
GC content: 37.24
Gene sequence:
>384_bases ATGAAAAAGCTATTTTTAATAATTATTGCGGGACTTATATCTACTGGTTGTACGTTAAATCAAGAACTAGGTCTATTATC CATGACTACAGACTCTATGGAAGAGCGGGAAAAGGTTAGGTTTGTCGCTATCCACTATAGTGTGCTTTTGTCCTGTGATA AAAGCTATGAACATCTACCAAAATTAGCTAATAGGTTTAGAGAGTTAGAAGTGGTAGCCCCTCAAACAGCTTGGGGGTTA AAAGCCTTAGGTGGTGATTTGCCTCCAGCTAAAACTTACATGTTAATTGGTTGCGATAAAGCAAAAACAAATGTAGAACA TTGGGTCAAAACTAAAGAATATTATTATCACGGTCAGGGACAATGGGTGGTGTATAAAGACTAG
Upstream 100 bases:
>100_bases ACCAAAAATATGATGTATGGGGGTACGTATATAGAACCAATAGTTTTGGTCAAATCCTAGTTGCTTATGTGAAGCGTAAT GATGATAAAAGGGAGTTCTT
Downstream 100 bases:
>100_bases CCTGTTCAAGCTAAAGGCTAAAGAAGTGCATTTAGCTTTAGGCTTTTACCACGTTTTATAGTGTTTACAAATGGAAGTTA AAATGACTCAAGCGAATGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 127; Mature: 127
Protein sequence:
>127_residues MKKLFLIIIAGLISTGCTLNQELGLLSMTTDSMEEREKVRFVAIHYSVLLSCDKSYEHLPKLANRFRELEVVAPQTAWGL KALGGDLPPAKTYMLIGCDKAKTNVEHWVKTKEYYYHGQGQWVVYKD
Sequences:
>Translated_127_residues MKKLFLIIIAGLISTGCTLNQELGLLSMTTDSMEEREKVRFVAIHYSVLLSCDKSYEHLPKLANRFRELEVVAPQTAWGL KALGGDLPPAKTYMLIGCDKAKTNVEHWVKTKEYYYHGQGQWVVYKD >Mature_127_residues MKKLFLIIIAGLISTGCTLNQELGLLSMTTDSMEEREKVRFVAIHYSVLLSCDKSYEHLPKLANRFRELEVVAPQTAWGL KALGGDLPPAKTYMLIGCDKAKTNVEHWVKTKEYYYHGQGQWVVYKD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14482; Mature: 14482
Theoretical pI: Translated: 8.45; Mature: 8.45
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLFLIIIAGLISTGCTLNQELGLLSMTTDSMEEREKVRFVAIHYSVLLSCDKSYEHLP CCHHHHHHHHHHHHCCCCCCCCCCEEEECCCCHHHHHHEEEEEEEEEEEEECCCCHHHHH KLANRFRELEVVAPQTAWGLKALGGDLPPAKTYMLIGCDKAKTNVEHWVKTKEYYYHGQG HHHHHHHHEEEECCCCCCCHHHHCCCCCCCCEEEEEECCCCCCCHHHHHHHCCEEEECCC QWVVYKD EEEEEEC >Mature Secondary Structure MKKLFLIIIAGLISTGCTLNQELGLLSMTTDSMEEREKVRFVAIHYSVLLSCDKSYEHLP CCHHHHHHHHHHHHCCCCCCCCCCEEEECCCCHHHHHHEEEEEEEEEEEEECCCCHHHHH KLANRFRELEVVAPQTAWGLKALGGDLPPAKTYMLIGCDKAKTNVEHWVKTKEYYYHGQG HHHHHHHHEEEECCCCCCCHHHHCCCCCCCCEEEEEECCCCCCCHHHHHHHCCEEEECCC QWVVYKD EEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA