Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
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Accession | NC_010334 |
Length | 5,226,917 |
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The map label for this gene is creA [H]
Identifier: 167623661
GI number: 167623661
Start: 2074089
End: 2074583
Strand: Direct
Name: creA [H]
Synonym: Shal_1730
Alternate gene names: 167623661
Gene position: 2074089-2074583 (Clockwise)
Preceding gene: 167623660
Following gene: 167623666
Centisome position: 39.68
GC content: 43.43
Gene sequence:
>495_bases ATGAAAGGCTTAAATAAAGGGCTGTTAGTTAGCCTAGGATTGTCACTTACTGTAACGCTGGGTTTAACAGGTTGTGGCGA TGATGTGGGCAAGGTGAGTTTAGGCTTATTTACCACCAAAGATGTGGTTATTGATGCTAGGCACGACCCAAAAATCCCAG GTGTGACTTGTCATATTAGCCGCATTGAGGCCGACTTAAGTCTTGCTGACCCATCGGATATGAGTATTTCTTGTCGTCAA ACGGGGCCTATCACCGCAGCTGAAATTGCTAATATCGATAAGAGTAAAAACGGCGAAGTGGTGTTTAAAGAGTCGTTAAG TATCTTGTTTAAATCGCTTAAAGTGCGCCGCATTTATGATGCTAAAAACCAAACCTTACTGTATCTGTCTTATTCCACCA AAGAGACTAACGGTAGTCACAAACATGCGCTTTCGACTGTGCCACTCTATGGTACTGAAGCGTGGATCCCAGGTGGGGCT GTTATTAATCACTAA
Upstream 100 bases:
>100_bases TACAGTGTTTAGATACAAGTGTTTAGACGCGAGTGTTTGGATTTACAAGAGTAAGATCGGTAATTAGTCACCGTTGACTC AATAGCTAAAGGAAATGGAT
Downstream 100 bases:
>100_bases TCTGCCCGAGACTTAGATTTACTCACTCTTTATAAATGAGCTCTGATAAATGGGCTTAGTTATTGAGTCTAAGAGCTGAG CTTAATGATCAGTTCGTTTA
Product: CreA family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 164; Mature: 164
Protein sequence:
>164_residues MKGLNKGLLVSLGLSLTVTLGLTGCGDDVGKVSLGLFTTKDVVIDARHDPKIPGVTCHISRIEADLSLADPSDMSISCRQ TGPITAAEIANIDKSKNGEVVFKESLSILFKSLKVRRIYDAKNQTLLYLSYSTKETNGSHKHALSTVPLYGTEAWIPGGA VINH
Sequences:
>Translated_164_residues MKGLNKGLLVSLGLSLTVTLGLTGCGDDVGKVSLGLFTTKDVVIDARHDPKIPGVTCHISRIEADLSLADPSDMSISCRQ TGPITAAEIANIDKSKNGEVVFKESLSILFKSLKVRRIYDAKNQTLLYLSYSTKETNGSHKHALSTVPLYGTEAWIPGGA VINH >Mature_164_residues MKGLNKGLLVSLGLSLTVTLGLTGCGDDVGKVSLGLFTTKDVVIDARHDPKIPGVTCHISRIEADLSLADPSDMSISCRQ TGPITAAEIANIDKSKNGEVVFKESLSILFKSLKVRRIYDAKNQTLLYLSYSTKETNGSHKHALSTVPLYGTEAWIPGGA VINH
Specific function: Unknown
COG id: COG3045
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1790859, Length=114, Percent_Identity=47.3684210526316, Blast_Score=97, Evalue=6e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010292 [H]
Pfam domain/function: PF05981 CreA [H]
EC number: NA
Molecular weight: Translated: 17537; Mature: 17537
Theoretical pI: Translated: 8.48; Mature: 8.48
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKGLNKGLLVSLGLSLTVTLGLTGCGDDVGKVSLGLFTTKDVVIDARHDPKIPGVTCHIS CCCCCCCEEEEECCEEEEEEEEECCCCCCCEEEEEEEEECEEEEECCCCCCCCCEEEEEE RIEADLSLADPSDMSISCRQTGPITAAEIANIDKSKNGEVVFKESLSILFKSLKVRRIYD EEEEEEEECCCCCCEEEECCCCCCCHHHHCCCCCCCCCCEEEHHHHHHHHHHHHEEEEEC AKNQTLLYLSYSTKETNGSHKHALSTVPLYGTEAWIPGGAVINH CCCCEEEEEEECCCCCCCCCCEEEEECCCCCCCEECCCCEEECC >Mature Secondary Structure MKGLNKGLLVSLGLSLTVTLGLTGCGDDVGKVSLGLFTTKDVVIDARHDPKIPGVTCHIS CCCCCCCEEEEECCEEEEEEEEECCCCCCCEEEEEEEEECEEEEECCCCCCCCCEEEEEE RIEADLSLADPSDMSISCRQTGPITAAEIANIDKSKNGEVVFKESLSILFKSLKVRRIYD EEEEEEEECCCCCCEEEECCCCCCCHHHHCCCCCCCCCCEEEHHHHHHHHHHHHEEEEEC AKNQTLLYLSYSTKETNGSHKHALSTVPLYGTEAWIPGGAVINH CCCCEEEEEEECCCCCCCCCCEEEEECCCCCCCEECCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]