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The map label for this gene is slyA [C]

Identifier: 167623639

GI number: 167623639

Start: 2052671

End: 2053084

Strand: Direct

Name: slyA [C]

Synonym: Shal_1708

Alternate gene names: 167623639

Gene position: 2052671-2053084 (Clockwise)

Preceding gene: 167623638

Following gene: 167623640

Centisome position: 39.27

GC content: 41.06

Gene sequence:

>414_bases
TTGAATCAATTTGAGAGTCTAGGTTACTTGGTGTCTCATTTGAATGTTGATCTACAAAACTCATTAGATCAACGTCTTAG
ACGATACCAATTAGAGATTAAGCTATGGCCTGTGCTGTTTTCACTATGGCAGGAAGAGGGCGTGACTCAAACTGCACTCT
CTAAGCGCTGTGATGTTGCAAATTACACTATGACTCGATTGCTCGACCAATTACAAGAACAAGGCTTGATCACTCGTCAT
CAGGATGCTGAGAACCGCCGAGCCTTTCAAATATACCTCACCGATAACGGTAAAGCCCTTGAGCAGGACTTAGTTAGAGA
GGCTGAGCGAGTCAATGAAGCCTTTTTAGATAATTTGGCCTTGGATGAGCGACAGATATTTTTAAAACTGCTGAATAAAA
TCAATCGTTATTAA

Upstream 100 bases:

>100_bases
CTGTTTGAATGAATATGCGCAATAAGCGTTCACTAATGCTAGTTTCTTTTGGTGTAAGTGATAAGATTAAATGAAGCATA
AACAGCCGTGGAGGTGTTGA

Downstream 100 bases:

>100_bases
TCTATTATAAATAAGCTGTACTGCACCATACACAAATTGACCATTTGAGTGTTGATTTCACTGTACAAGCTACACGTAAG
CACTCCAACACTTGCTGGTG

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator MarR Family; Transcriptional Regulator; Transcriptional Regulator MarR Family Protein; Transcription Regulator Protein; Regulatory Protein MarR; HTH-Type Transcriptional Regulator; Transcriptional Regulator Protein; Transcriptional Regulator MarR; MarR Family Transcriptional Regulator Protein

Number of amino acids: Translated: 137; Mature: 137

Protein sequence:

>137_residues
MNQFESLGYLVSHLNVDLQNSLDQRLRRYQLEIKLWPVLFSLWQEEGVTQTALSKRCDVANYTMTRLLDQLQEQGLITRH
QDAENRRAFQIYLTDNGKALEQDLVREAERVNEAFLDNLALDERQIFLKLLNKINRY

Sequences:

>Translated_137_residues
MNQFESLGYLVSHLNVDLQNSLDQRLRRYQLEIKLWPVLFSLWQEEGVTQTALSKRCDVANYTMTRLLDQLQEQGLITRH
QDAENRRAFQIYLTDNGKALEQDLVREAERVNEAFLDNLALDERQIFLKLLNKINRY
>Mature_137_residues
MNQFESLGYLVSHLNVDLQNSLDQRLRRYQLEIKLWPVLFSLWQEEGVTQTALSKRCDVANYTMTRLLDQLQEQGLITRH
QDAENRRAFQIYLTDNGKALEQDLVREAERVNEAFLDNLALDERQIFLKLLNKINRY

Specific function: Transcription Factor That Activates Expression Of Genes Such As Molecular Chaperones (Grol, Gros, Dnak, Grpe, And Cbpa), Proteins Involved In Acid Resistance (Hdea, Hdeb, And Gada), The Starvation Lipoprotein Slp, Virulence Protein Hlye/Clya. Represses Ex

COG id: COG1846

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16272; Mature: 16272

Theoretical pI: Translated: 5.26; Mature: 5.26

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQFESLGYLVSHLNVDLQNSLDQRLRRYQLEIKLWPVLFSLWQEEGVTQTALSKRCDVA
CCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHH
NYTMTRLLDQLQEQGLITRHQDAENRRAFQIYLTDNGKALEQDLVREAERVNEAFLDNLA
HHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHC
LDERQIFLKLLNKINRY
HHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNQFESLGYLVSHLNVDLQNSLDQRLRRYQLEIKLWPVLFSLWQEEGVTQTALSKRCDVA
CCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHH
NYTMTRLLDQLQEQGLITRHQDAENRRAFQIYLTDNGKALEQDLVREAERVNEAFLDNLA
HHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHC
LDERQIFLKLLNKINRY
HHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA