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The map label for this gene is 167623625

Identifier: 167623625

GI number: 167623625

Start: 2031280

End: 2032440

Strand: Direct

Name: 167623625

Synonym: Shal_1694

Alternate gene names: NA

Gene position: 2031280-2032440 (Clockwise)

Preceding gene: 167623624

Following gene: 167623629

Centisome position: 38.86

GC content: 43.76

Gene sequence:

>1161_bases
ATGAAACAAGCAAAGTTAACGCTAATAGGTGCGGCAACGATTGCGGCAATGAGCTTCGGTGTCCAAGCTGATACTGAGTT
TAAATTTGGTGGTTATGTAAAAGCTGATGTGATGTTCAGTGATTACAGCAATGGCGCACCGGGGTCGGGTAGTTTATCTC
GCCAATTCTATGTGCCTGGTACGATATATGGTGATCCGAGTAATGGTAAGCAGGTAGTCGACTTTCAAGCTAGAGAATCG
CGTTTTAACTTCAAAACATCTACCGATCTCGACGGCCATAAGCTTACAGGTTTTATTGAACTTGATTTTATGACTCATAC
AGATGGAAATGAGCGCGTATCAAATAGTTATTCGCCACGCATTCGTCAAGCATTTGTCAGTTTCGACAATTGGGCTGCAG
GCCAAATGTGGACCACCTTCCAAAATCCAGGTGCGTTACCTGAGAACTTAGACTTTGTTGGCGCTGCTGAAGGTACGCCA
TTTGTGCGTCAAACAATGGTTAGGTACACCAATGGTGGCTTCCAGTTCTCAGTTGAGAACCCTGAAACAACTGTAAATGG
GTATCGAGATCCAACAGGTAGTCGTATTACGAGTGGTAGTGGCATGGTTCCAGACTTTGTTGCTCGCTATAACATGAAGA
CTGAGGGCGGAATGGCGTTTACGTTTGCTGGTATCGCGCGTCAGCTAAATGTTGACATGAATAAAGATACCGCCAACCCC
ATCGACTCCTCAGAGCTTGGTTATGGTGTGAGCTTCACAGGTGTAATTCCTGTTGGGCAGGATGATATCAAAATGTCAGC
AACTTACGGAGAAGGGTTAGGGCGTTATATGGCACTTAACTATGTCAATGCCGGTGTACTCGATGCTAATGGAGACATTG
AGACTATCGAGTCCTATGGTGGATTTATCTCATATCGTCATTGGTGGAATGATAAGTGGAGAACGAGTATTACTGGTTCT
GGCTTTAAAGCAGAGAATAACGTTAACCTAATTGGTAATAACGTCAATAAAGATTCTTACTCTGGTTACATTAACCTGCT
TTACTCACCCGTTAAGCCGTTAACGGTAGGGGTTGAATATATGTATGCGAAAAACACCAAAGAGAACGGTATGGATGGCG
AGTTAAATCGTGTGATATTTTCAATGAAGTACGTGCTGTAG

Upstream 100 bases:

>100_bases
ATATGTTCTACCTTGGTCTGATAGACCTATTGCTAATGTTGTCGAGTTGTTAACTCGGTCATATTTTGTATGGATAATAA
AAATATCAGGGAGAAAGGGA

Downstream 100 bases:

>100_bases
TTAATCTAACGCAAATAAAAAGGAGGCCTTGGCCTCCTTTTTTATAATGGACTGAGTATGTTACTTATGCAGCAGGCATT
AATTCGTTGTCTCTTACATA

Product: porin

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 386; Mature: 386

Protein sequence:

>386_residues
MKQAKLTLIGAATIAAMSFGVQADTEFKFGGYVKADVMFSDYSNGAPGSGSLSRQFYVPGTIYGDPSNGKQVVDFQARES
RFNFKTSTDLDGHKLTGFIELDFMTHTDGNERVSNSYSPRIRQAFVSFDNWAAGQMWTTFQNPGALPENLDFVGAAEGTP
FVRQTMVRYTNGGFQFSVENPETTVNGYRDPTGSRITSGSGMVPDFVARYNMKTEGGMAFTFAGIARQLNVDMNKDTANP
IDSSELGYGVSFTGVIPVGQDDIKMSATYGEGLGRYMALNYVNAGVLDANGDIETIESYGGFISYRHWWNDKWRTSITGS
GFKAENNVNLIGNNVNKDSYSGYINLLYSPVKPLTVGVEYMYAKNTKENGMDGELNRVIFSMKYVL

Sequences:

>Translated_386_residues
MKQAKLTLIGAATIAAMSFGVQADTEFKFGGYVKADVMFSDYSNGAPGSGSLSRQFYVPGTIYGDPSNGKQVVDFQARES
RFNFKTSTDLDGHKLTGFIELDFMTHTDGNERVSNSYSPRIRQAFVSFDNWAAGQMWTTFQNPGALPENLDFVGAAEGTP
FVRQTMVRYTNGGFQFSVENPETTVNGYRDPTGSRITSGSGMVPDFVARYNMKTEGGMAFTFAGIARQLNVDMNKDTANP
IDSSELGYGVSFTGVIPVGQDDIKMSATYGEGLGRYMALNYVNAGVLDANGDIETIESYGGFISYRHWWNDKWRTSITGS
GFKAENNVNLIGNNVNKDSYSGYINLLYSPVKPLTVGVEYMYAKNTKENGMDGELNRVIFSMKYVL
>Mature_386_residues
MKQAKLTLIGAATIAAMSFGVQADTEFKFGGYVKADVMFSDYSNGAPGSGSLSRQFYVPGTIYGDPSNGKQVVDFQARES
RFNFKTSTDLDGHKLTGFIELDFMTHTDGNERVSNSYSPRIRQAFVSFDNWAAGQMWTTFQNPGALPENLDFVGAAEGTP
FVRQTMVRYTNGGFQFSVENPETTVNGYRDPTGSRITSGSGMVPDFVARYNMKTEGGMAFTFAGIARQLNVDMNKDTANP
IDSSELGYGVSFTGVIPVGQDDIKMSATYGEGLGRYMALNYVNAGVLDANGDIETIESYGGFISYRHWWNDKWRTSITGS
GFKAENNVNLIGNNVNKDSYSGYINLLYSPVKPLTVGVEYMYAKNTKENGMDGELNRVIFSMKYVL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42415; Mature: 42415

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQAKLTLIGAATIAAMSFGVQADTEFKFGGYVKADVMFSDYSNGAPGSGSLSRQFYVPG
CCCCEEEEEEHHHHHHHHCCCCCCCCEECCCEEEEEEEEECCCCCCCCCCCCCEEEEECE
TIYGDPSNGKQVVDFQARESRFNFKTSTDLDGHKLTGFIELDFMTHTDGNERVSNSYSPR
EEECCCCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEEEEEEEEECCCCHHHCCCCCHH
IRQAFVSFDNWAAGQMWTTFQNPGALPENLDFVGAAEGTPFVRQTMVRYTNGGFQFSVEN
HHHHHHCCCCCCCCCEEEEECCCCCCCCCCCEEECCCCCHHHHHHHHHCCCCCEEEEECC
PETTVNGYRDPTGSRITSGSGMVPDFVARYNMKTEGGMAFTFAGIARQLNVDMNKDTANP
CCCEECCCCCCCCCEEECCCCCCCHHHHHCCCCCCCCEEEEEEHHHHEEECCCCCCCCCC
IDSSELGYGVSFTGVIPVGQDDIKMSATYGEGLGRYMALNYVNAGVLDANGDIETIESYG
CCCCCCCCCEEEEEEEECCCCCEEEEEECCCCCCCEEEEEEECCEEEECCCCHHHHHHCC
GFISYRHWWNDKWRTSITGSGFKAENNVNLIGNNVNKDSYSGYINLLYSPVKPLTVGVEY
CEEEEEEECCCCEEEEECCCCEECCCCCEEEECCCCCCCCCCEEEEEECCCCCEEEEEEE
MYAKNTKENGMDGELNRVIFSMKYVL
EEECCCCCCCCCCHHHHHEEEEEECC
>Mature Secondary Structure
MKQAKLTLIGAATIAAMSFGVQADTEFKFGGYVKADVMFSDYSNGAPGSGSLSRQFYVPG
CCCCEEEEEEHHHHHHHHCCCCCCCCEECCCEEEEEEEEECCCCCCCCCCCCCEEEEECE
TIYGDPSNGKQVVDFQARESRFNFKTSTDLDGHKLTGFIELDFMTHTDGNERVSNSYSPR
EEECCCCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEEEEEEEEECCCCHHHCCCCCHH
IRQAFVSFDNWAAGQMWTTFQNPGALPENLDFVGAAEGTPFVRQTMVRYTNGGFQFSVEN
HHHHHHCCCCCCCCCEEEEECCCCCCCCCCCEEECCCCCHHHHHHHHHCCCCCEEEEECC
PETTVNGYRDPTGSRITSGSGMVPDFVARYNMKTEGGMAFTFAGIARQLNVDMNKDTANP
CCCEECCCCCCCCCEEECCCCCCCHHHHHCCCCCCCCEEEEEEHHHHEEECCCCCCCCCC
IDSSELGYGVSFTGVIPVGQDDIKMSATYGEGLGRYMALNYVNAGVLDANGDIETIESYG
CCCCCCCCCEEEEEEEECCCCCEEEEEECCCCCCCEEEEEEECCEEEECCCCHHHHHHCC
GFISYRHWWNDKWRTSITGSGFKAENNVNLIGNNVNKDSYSGYINLLYSPVKPLTVGVEY
CEEEEEEECCCCEEEEECCCCEECCCCCEEEECCCCCCCCCCEEEEEECCCCCEEEEEEE
MYAKNTKENGMDGELNRVIFSMKYVL
EEECCCCCCCCCCHHHHHEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA