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The map label for this gene is rfbI [H]

Identifier: 167623600

GI number: 167623600

Start: 2000122

End: 2001132

Strand: Direct

Name: rfbI [H]

Synonym: Shal_1669

Alternate gene names: 167623600

Gene position: 2000122-2001132 (Clockwise)

Preceding gene: 167623596

Following gene: 167623601

Centisome position: 38.27

GC content: 43.32

Gene sequence:

>1011_bases
ATGAGCAGATTTTTTTTAGATGGACAAACTTTTGAATCTCAACTGAATGAATCAGTTTTGGATACGCTAATTCGTAGTGG
GAATGCCATCAGTTACTCATGTAAGAAGGGTACCTGTAAAACCTGCTTAGTACAGCATGTTGGCGGTGAGTTATCGCCTG
GGGCGCAGCGTGGTTTAAATGCGAGATTGAAAGCCAATGACTACCTTTGTGCATGCCAATGTATTCCTAAGGATGGATTG
AGGCTAAAAACTGTTTTGGAGCAGGATTTATTTATCTCTGCGCAATTAGTTGAGCGTCAGTTTGTCAGCGATTCCCTCAT
GAAGTTAGTGATTAAGCTATCTGAACGGCTCGATAGTTTGCCGGGGCAATATATCAATTTGCGCCGTTTTGATGGGCTAA
CTCGCAGTTACGCTATCGTTAAATGCCTAGAAGGTAATCTTATCGAGATGCACATCACGCGAAAACATAATGGCCAATTT
AGTAATTGGTTGTTTGGCACTGCCAGTGTGGGAGAGCAGCTTTTAGTGCAGGGACCATTGGGGCAATGTATTTATAAGGC
TGAATATCAAACAGATAAGCTTATTCTTATTGGTCATGGTAGTGGTATAGGAGCGGCTGTGGGGATCGTTGAGCACGCGT
TAGCGCTGGATCACCAAGGTGATATTTATCTGTACCATGATGCTCGGTATATACAAGATCTTTATTTACATTCGGCATTA
TTAAAGTTGTCACTGGCAAACAAGCAATTCAATTATCAAGCCTGTATCACCTCAAAGGCACAGAGTGAACAGAGGCTTCC
CAGTCGTTGTACTTATGGTCAAGCGGCAGATATTGCTGCACAGCAGCATCCCATTGGTCGAGACTGTCGAGTGTTCCTTT
GTGGTGAACCGTTAGCGGTTAATCAAGCGCAGCAACAAGCATTCTTAGATGGGTTCGAGTATACCAATATTCATGTTTTG
CCGTTTGAGTATAAGGATTTGCGCGCGGCAGCACGTGGAGGAAAAAATTAA

Upstream 100 bases:

>100_bases
ATAAGAGTCGATACTCGCCCTACTAATTTTAGCGTCATTATCACGGAAATGATTGCGGTATCATAATATTTTTTAGAATT
TTTAATGAAATTATTAGCTA

Downstream 100 bases:

>100_bases
CTCAATCACTGACTGAATGTTATCGTTAGCCTAATCGAGATCAAATCTGCATGATTAAGGCTATTGCCTCAGGTCTTTCT
TGGTTGGTACCATAGCGCGT

Product: ferredoxin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 336; Mature: 335

Protein sequence:

>336_residues
MSRFFLDGQTFESQLNESVLDTLIRSGNAISYSCKKGTCKTCLVQHVGGELSPGAQRGLNARLKANDYLCACQCIPKDGL
RLKTVLEQDLFISAQLVERQFVSDSLMKLVIKLSERLDSLPGQYINLRRFDGLTRSYAIVKCLEGNLIEMHITRKHNGQF
SNWLFGTASVGEQLLVQGPLGQCIYKAEYQTDKLILIGHGSGIGAAVGIVEHALALDHQGDIYLYHDARYIQDLYLHSAL
LKLSLANKQFNYQACITSKAQSEQRLPSRCTYGQAADIAAQQHPIGRDCRVFLCGEPLAVNQAQQQAFLDGFEYTNIHVL
PFEYKDLRAAARGGKN

Sequences:

>Translated_336_residues
MSRFFLDGQTFESQLNESVLDTLIRSGNAISYSCKKGTCKTCLVQHVGGELSPGAQRGLNARLKANDYLCACQCIPKDGL
RLKTVLEQDLFISAQLVERQFVSDSLMKLVIKLSERLDSLPGQYINLRRFDGLTRSYAIVKCLEGNLIEMHITRKHNGQF
SNWLFGTASVGEQLLVQGPLGQCIYKAEYQTDKLILIGHGSGIGAAVGIVEHALALDHQGDIYLYHDARYIQDLYLHSAL
LKLSLANKQFNYQACITSKAQSEQRLPSRCTYGQAADIAAQQHPIGRDCRVFLCGEPLAVNQAQQQAFLDGFEYTNIHVL
PFEYKDLRAAARGGKN
>Mature_335_residues
SRFFLDGQTFESQLNESVLDTLIRSGNAISYSCKKGTCKTCLVQHVGGELSPGAQRGLNARLKANDYLCACQCIPKDGLR
LKTVLEQDLFISAQLVERQFVSDSLMKLVIKLSERLDSLPGQYINLRRFDGLTRSYAIVKCLEGNLIEMHITRKHNGQFS
NWLFGTASVGEQLLVQGPLGQCIYKAEYQTDKLILIGHGSGIGAAVGIVEHALALDHQGDIYLYHDARYIQDLYLHSALL
KLSLANKQFNYQACITSKAQSEQRLPSRCTYGQAADIAAQQHPIGRDCRVFLCGEPLAVNQAQQQAFLDGFEYTNIHVLP
FEYKDLRAAARGGKN

Specific function: Unknown

COG id: COG0543

COG function: function code HC; 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding FR-type domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006058
- InterPro:   IPR012675
- InterPro:   IPR017927
- InterPro:   IPR001041
- InterPro:   IPR001709
- InterPro:   IPR008333
- InterPro:   IPR001433
- InterPro:   IPR001221
- InterPro:   IPR017938 [H]

Pfam domain/function: PF00970 FAD_binding_6; PF00111 Fer2; PF00175 NAD_binding_1 [H]

EC number: NA

Molecular weight: Translated: 37367; Mature: 37236

Theoretical pI: Translated: 8.01; Mature: 8.01

Prosite motif: PS51085 2FE2S_FER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.6 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
3.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRFFLDGQTFESQLNESVLDTLIRSGNAISYSCKKGTCKTCLVQHVGGELSPGAQRGLN
CCEEEECCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHCCCCCCCCHHHCCC
ARLKANDYLCACQCIPKDGLRLKTVLEQDLFISAQLVERQFVSDSLMKLVIKLSERLDSL
CEEECCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PGQYINLRRFDGLTRSYAIVKCLEGNLIEMHITRKHNGQFSNWLFGTASVGEQLLVQGPL
CCCEEEEHHHCCCHHHHHHEEECCCCEEEEEEEECCCCCCCCEEEECHHCCCCEEEECCH
GQCIYKAEYQTDKLILIGHGSGIGAAVGIVEHALALDHQGDIYLYHDARYIQDLYLHSAL
HHHEEEECCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHH
LKLSLANKQFNYQACITSKAQSEQRLPSRCTYGQAADIAAQQHPIGRDCRVFLCGEPLAV
HHHHHCCCCCCCCEEECCHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCEEEEECCCCCC
NQAQQQAFLDGFEYTNIHVLPFEYKDLRAAARGGKN
CHHHHHHHHCCCCCCEEEEEECCHHHHHHHHCCCCC
>Mature Secondary Structure 
SRFFLDGQTFESQLNESVLDTLIRSGNAISYSCKKGTCKTCLVQHVGGELSPGAQRGLN
CEEEECCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHCCCCCCCCHHHCCC
ARLKANDYLCACQCIPKDGLRLKTVLEQDLFISAQLVERQFVSDSLMKLVIKLSERLDSL
CEEECCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PGQYINLRRFDGLTRSYAIVKCLEGNLIEMHITRKHNGQFSNWLFGTASVGEQLLVQGPL
CCCEEEEHHHCCCHHHHHHEEECCCCEEEEEEEECCCCCCCCEEEECHHCCCCEEEECCH
GQCIYKAEYQTDKLILIGHGSGIGAAVGIVEHALALDHQGDIYLYHDARYIQDLYLHSAL
HHHEEEECCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHH
LKLSLANKQFNYQACITSKAQSEQRLPSRCTYGQAADIAAQQHPIGRDCRVFLCGEPLAV
HHHHHCCCCCCCCEEECCHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCEEEEECCCCCC
NQAQQQAFLDGFEYTNIHVLPFEYKDLRAAARGGKN
CHHHHHHHHCCCCCCEEEEEECCHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1710759; 11677609 [H]