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The map label for this gene is ybcL [H]

Identifier: 167623596

GI number: 167623596

Start: 1994903

End: 1995454

Strand: Direct

Name: ybcL [H]

Synonym: Shal_1665

Alternate gene names: 167623596

Gene position: 1994903-1995454 (Clockwise)

Preceding gene: 167623594

Following gene: 167623600

Centisome position: 38.17

GC content: 46.2

Gene sequence:

>552_bases
ATGAGATTCAATAAAGTCGTGTTATTAGCTGCATGTAGTTTATTTGCATTTTCCAGTCAGGCGATAGAGCTAAATAGTAC
AAATGTCACAGAAGGAAAGACACTTAAAAATGCCCAGTTATTTAATCAATGGGGCTGTACAGGAGAGAATATCTCTCCAG
AGCTCAGTTGGAATGACGTCCCTGCAGGGACCAAAAGTTTTGCCGTGACAATGTATGATCCTGATGCGCCAACTGGTAGC
GGCTGGTGGCATTGGATGGTTGTTAACTTGCCTGCAAGCACTCAGAGTTTGCCGGCTAACTCGGGTCTAAAGGGAGGGGC
TAATCTTCCTAAAGGGGCGAGTATGGTCTCTAATGACTTCGGCTTTAAAGGTTTTGGTGGTGGCTGCCCTCCTGAAGGAG
CTGCGCCGCATAATTACCAAATCACTGTTTATGCATTAGATGTTGCCCATCTAGAATTGCCAGAAAATGGAACTGCTGCG
CTGGCGGGATATAATATCTATCAGCACCTTTTAGGCAAGGCTGTACTGACTGCGCCGACGAATGCTAGGTAG

Upstream 100 bases:

>100_bases
GGTAATGTAGCGATTTAATCTGTAAGTTCGCTATCATTTTTTCTACTATGCTTATAGCATAGGGACGTAGACATTAATCA
AATCAATATAGGTAGAATAT

Downstream 100 bases:

>100_bases
TTTATCGCTGCGTGGGCCTGAGATAGAGTGAAGTCGGGTTAAATTAATATGAAAAGGCAGCATATGAATGCTGCCTTTTG
CTTAAAGCAGGTTTTGCTTA

Product: PEBP family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 183; Mature: 183

Protein sequence:

>183_residues
MRFNKVVLLAACSLFAFSSQAIELNSTNVTEGKTLKNAQLFNQWGCTGENISPELSWNDVPAGTKSFAVTMYDPDAPTGS
GWWHWMVVNLPASTQSLPANSGLKGGANLPKGASMVSNDFGFKGFGGGCPPEGAAPHNYQITVYALDVAHLELPENGTAA
LAGYNIYQHLLGKAVLTAPTNAR

Sequences:

>Translated_183_residues
MRFNKVVLLAACSLFAFSSQAIELNSTNVTEGKTLKNAQLFNQWGCTGENISPELSWNDVPAGTKSFAVTMYDPDAPTGS
GWWHWMVVNLPASTQSLPANSGLKGGANLPKGASMVSNDFGFKGFGGGCPPEGAAPHNYQITVYALDVAHLELPENGTAA
LAGYNIYQHLLGKAVLTAPTNAR
>Mature_183_residues
MRFNKVVLLAACSLFAFSSQAIELNSTNVTEGKTLKNAQLFNQWGCTGENISPELSWNDVPAGTKSFAVTMYDPDAPTGS
GWWHWMVVNLPASTQSLPANSGLKGGANLPKGASMVSNDFGFKGFGGGCPPEGAAPHNYQITVYALDVAHLELPENGTAA
LAGYNIYQHLLGKAVLTAPTNAR

Specific function: Unknown

COG id: COG1881

COG function: function code R; Phospholipid-binding protein

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0098 family [H]

Homologues:

Organism=Escherichia coli, GI1786757, Length=174, Percent_Identity=45.4022988505747, Blast_Score=173, Evalue=6e-45,
Organism=Escherichia coli, GI1786990, Length=157, Percent_Identity=48.4076433121019, Blast_Score=159, Evalue=1e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008914
- InterPro:   IPR005247 [H]

Pfam domain/function: PF01161 PBP [H]

EC number: NA

Molecular weight: Translated: 19361; Mature: 19361

Theoretical pI: Translated: 6.50; Mature: 6.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFNKVVLLAACSLFAFSSQAIELNSTNVTEGKTLKNAQLFNQWGCTGENISPELSWNDV
CCCCCEEHHHHHHHHHCCCCEEEECCCCCCCCCEECCHHHHHHCCCCCCCCCCCCCCCCC
PAGTKSFAVTMYDPDAPTGSGWWHWMVVNLPASTQSLPANSGLKGGANLPKGASMVSNDF
CCCCCEEEEEEECCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHCCCC
GFKGFGGGCPPEGAAPHNYQITVYALDVAHLELPENGTAALAGYNIYQHLLGKAVLTAPT
CCCCCCCCCCCCCCCCCCEEEEEEEEEEEEEECCCCCCEEEEHHHHHHHHHCCEEEECCC
NAR
CCC
>Mature Secondary Structure
MRFNKVVLLAACSLFAFSSQAIELNSTNVTEGKTLKNAQLFNQWGCTGENISPELSWNDV
CCCCCEEHHHHHHHHHCCCCEEEECCCCCCCCCEECCHHHHHHCCCCCCCCCCCCCCCCC
PAGTKSFAVTMYDPDAPTGSGWWHWMVVNLPASTQSLPANSGLKGGANLPKGASMVSNDF
CCCCCEEEEEEECCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHCCCC
GFKGFGGGCPPEGAAPHNYQITVYALDVAHLELPENGTAALAGYNIYQHLLGKAVLTAPT
CCCCCCCCCCCCCCCCCCEEEEEEEEEEEEEECCCCCCEEEEHHHHHHHHHCCEEEECCC
NAR
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 11439028 [H]