The gene/protein map for NC_010334 is currently unavailable.
Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is 167623534

Identifier: 167623534

GI number: 167623534

Start: 1922490

End: 1924973

Strand: Direct

Name: 167623534

Synonym: Shal_1603

Alternate gene names: NA

Gene position: 1922490-1924973 (Clockwise)

Preceding gene: 167623532

Following gene: 167623536

Centisome position: 36.78

GC content: 44.57

Gene sequence:

>2484_bases
ATGAAGTCAGCTTATAGCACTTTTATTGCGTTAATATGGTCGTTTTTCCTTATAGGTTGTAGTGGGGGCGGCAGCATTTC
AACCGATCCAGACAACCCTAATCCACCAGAGCCGACAGAGGTTGTTACTGTCACACTTTCAATTTCAAACACAGAATCCA
TTAAAGCTGAGGAACCAGCTGAAGTTACCGCAGTTGTTACCAGCTCTCTCAATGGCCCTTTGGCTGGAAAGCTTGTGACT
TTTAAACTTGATAACGGCTCAATAGGAACCTTTGTCCCCGGTATTGGTACAGATAAGACCGATGGTAATGGTACAGCTAA
AGTCTTATTAGCCACTTCAAATATTCCTGGTGCGGGCTCATTAACCGTGGAGGTCGCTGGATATAGTGATGTGGTGTCTG
AACCATTGGTTTTTGTCATGGAAGGTGACGGTGGTGAAGTGAGCAATGGCGCATCAATCGTTGTGTCATTAACAGATACT
AATGGCGCACCTATTGATGCTATTACGACAACGATACCAGGTAAGGTTACGGCAACAGTGAGTGGTATTAATAAACCCTC
TATTGTGACCTTTGAAACAAGCATTGGTGATCTTCCTATCAAATCTGCAGTAACCGATGCAAATGGTAAAGCAACTGTTG
ATATTTATGCGGGCAGTACGCTGGGCGCAGGAGAAGTGATTGCTTCACTTTCAAGTGGTGAAGAGGGCAAAGCGGTCGTA
GTCGTTGGTGCAACAAACGTCGTAATGGGCAGTGGTACGCCTTTTGAAGAAGGTGTTGCAAATGTCAGTGTTGATGAACT
AACCGCTGGCGGTACTGCAACAATCTCGGTTGCAATTCAAGATGAAAATGGTAATCCTTTTACTCAACCTGTCGATGTTA
ATTTTTCTTCAACCTGTTCAACTAAACCAAGCCCAGAAGCAGAGATTAGTTCTCCAGTCCCTTCAGTCAATGGTGTGGCG
ACCACCACTTATTTAGCAAAGGGATGTAAAGGGGATGATGCGATTAATGTGACTGCTAATGCTGGAGGATTGAACTTAGC
GGCAACGGCAACCATTAAAGTATTAGCCGCTGATGTAGGGAGTATCGTATTTCTATCTGCTACCCCTCAAAATATCAGTA
TTCTAGGTACTGGCGGCGTAGAGTCATCAGTTGTTCAATTTAAGGTATTAGATACAAATAGTAACCCTGTTAGTAATCAA
GCTGTGTCTTTTAAGCTCAACACCGATGTTGGTGGAATTAGTTTAGATCCTGAAACAGCAACAACTAACAATCAAGGTAT
TGCACAAACTGTGGTGAGAACGGGTACGGTTGCAACGTCAGTACGTGTAACAGGGACTGTAGTCGATTCTAATCCTGTCA
TTTCGAGTCAGTCGAGTGAGCTTGTGGTGTCTACAGGGATCCCAGATCAAGATAGCTTCTCGTTATCTGCTTCAGTATTA
AATGCCGAAGGGTGGGATGTTGATGGAACAGAGGTTAGTGTCACAGCTCGCTTGGCAGATGCATTTAACAACCCTGTACC
AGACGGAACAACGATCTCATTTACCACCGAAGGCGGTTCAATTGAAGATGCTTGTCAGACTAAAAAAGGTGCTTGTAGCG
TTATCTGGACGAGTCAACAAGCGAGGCCTGAAGGCTATCAGTTGATCAATGGTGCTGGAGTGATAGTTAACGATCCCATC
GCGACTTTATCTTTCGACTCTAATTTAGGTGTGTACGGTAACCATTACGGCCAAAAGTATGGCGGACGAGCGACAATTTC
TGCTACAGCTATTGGTGAAGAGTCATTCCCTGATTTAAACGGTAACGGTCGTTTTGATGCCGATGAAGTTACGGCGTTTA
GGACACAAACTGATGTAAGCGGCATGCCATTTGATTTAGATGATGCCTTCAATGATTACAATGAAGATGGCCTGTTTAAC
CCTCAGCAAGATAATGGTCAACTCGGTGGCGAGTTAGAAGAATTAATAGACTTTAACTCTAATGGTGTCTTTGATGTTAA
AGATGGTAAATATAACGGGGTATTGTGCTCAAATCCGGTTCATGACGCCTGCGCCGATGGCGTGAGTGACTCTAAGTCTC
TTTATGTTCGTGGCAGCTTGGTTATCGTGATGTCTGGTAGCTCGGCATTGGCTACAGACCCTTCTCGCGTATTAATCGTT
GATAGTTATAGTGGCGCTAACGGTTCTTATGATCAAAGTATCGATATTATCGGTAAGGCTACGGGTACTGTGTATTTTAC
CATCTCCGATCTTCACAACCAGCAGATGCCAGCAGGCTCTAAGGTTCGTTTTACTGCTAGCGCGGGTTCGGTTGTGAGTG
GTTCAGAGTACGTTTGGCCTAGCACCAATTATAATGGCGGGCGCCAGTTTAGCGTGACGTTAAAAGGGGAGGATGAGCCA
AACTCAGGTACATTCCTTGTCACTGTAGAGACGCCAGGCGGAGTGAAAACTCAGGTGCTTTCATTACCTATCTCAATAAA
CTAA

Upstream 100 bases:

>100_bases
GGTTTATTGTGGAAAGGTTATGGTTAAATTGTGTAATGTAGGTGTTTGGGTGATCAAGGTATTGCCGAAAATAATAATTT
GAGTAACAGGGAGTCTGACC

Downstream 100 bases:

>100_bases
TTAATTGTAATGAAAAGCCCCGCAATGCGGGGCTTTTTTACACTTGTAAATCGGAAAAACTAAGTGCGAGAGTTTATCTC
TGGAATTGATAAACACTGCC

Product: Ig domain-containing protein

Products: NA

Alternate protein names: Ig Domain Domain Protein; Intimin/Invasin Family Protein; Invasin Domain-Containing Protein; Lipoprotein

Number of amino acids: Translated: 827; Mature: 827

Protein sequence:

>827_residues
MKSAYSTFIALIWSFFLIGCSGGGSISTDPDNPNPPEPTEVVTVTLSISNTESIKAEEPAEVTAVVTSSLNGPLAGKLVT
FKLDNGSIGTFVPGIGTDKTDGNGTAKVLLATSNIPGAGSLTVEVAGYSDVVSEPLVFVMEGDGGEVSNGASIVVSLTDT
NGAPIDAITTTIPGKVTATVSGINKPSIVTFETSIGDLPIKSAVTDANGKATVDIYAGSTLGAGEVIASLSSGEEGKAVV
VVGATNVVMGSGTPFEEGVANVSVDELTAGGTATISVAIQDENGNPFTQPVDVNFSSTCSTKPSPEAEISSPVPSVNGVA
TTTYLAKGCKGDDAINVTANAGGLNLAATATIKVLAADVGSIVFLSATPQNISILGTGGVESSVVQFKVLDTNSNPVSNQ
AVSFKLNTDVGGISLDPETATTNNQGIAQTVVRTGTVATSVRVTGTVVDSNPVISSQSSELVVSTGIPDQDSFSLSASVL
NAEGWDVDGTEVSVTARLADAFNNPVPDGTTISFTTEGGSIEDACQTKKGACSVIWTSQQARPEGYQLINGAGVIVNDPI
ATLSFDSNLGVYGNHYGQKYGGRATISATAIGEESFPDLNGNGRFDADEVTAFRTQTDVSGMPFDLDDAFNDYNEDGLFN
PQQDNGQLGGELEELIDFNSNGVFDVKDGKYNGVLCSNPVHDACADGVSDSKSLYVRGSLVIVMSGSSALATDPSRVLIV
DSYSGANGSYDQSIDIIGKATGTVYFTISDLHNQQMPAGSKVRFTASAGSVVSGSEYVWPSTNYNGGRQFSVTLKGEDEP
NSGTFLVTVETPGGVKTQVLSLPISIN

Sequences:

>Translated_827_residues
MKSAYSTFIALIWSFFLIGCSGGGSISTDPDNPNPPEPTEVVTVTLSISNTESIKAEEPAEVTAVVTSSLNGPLAGKLVT
FKLDNGSIGTFVPGIGTDKTDGNGTAKVLLATSNIPGAGSLTVEVAGYSDVVSEPLVFVMEGDGGEVSNGASIVVSLTDT
NGAPIDAITTTIPGKVTATVSGINKPSIVTFETSIGDLPIKSAVTDANGKATVDIYAGSTLGAGEVIASLSSGEEGKAVV
VVGATNVVMGSGTPFEEGVANVSVDELTAGGTATISVAIQDENGNPFTQPVDVNFSSTCSTKPSPEAEISSPVPSVNGVA
TTTYLAKGCKGDDAINVTANAGGLNLAATATIKVLAADVGSIVFLSATPQNISILGTGGVESSVVQFKVLDTNSNPVSNQ
AVSFKLNTDVGGISLDPETATTNNQGIAQTVVRTGTVATSVRVTGTVVDSNPVISSQSSELVVSTGIPDQDSFSLSASVL
NAEGWDVDGTEVSVTARLADAFNNPVPDGTTISFTTEGGSIEDACQTKKGACSVIWTSQQARPEGYQLINGAGVIVNDPI
ATLSFDSNLGVYGNHYGQKYGGRATISATAIGEESFPDLNGNGRFDADEVTAFRTQTDVSGMPFDLDDAFNDYNEDGLFN
PQQDNGQLGGELEELIDFNSNGVFDVKDGKYNGVLCSNPVHDACADGVSDSKSLYVRGSLVIVMSGSSALATDPSRVLIV
DSYSGANGSYDQSIDIIGKATGTVYFTISDLHNQQMPAGSKVRFTASAGSVVSGSEYVWPSTNYNGGRQFSVTLKGEDEP
NSGTFLVTVETPGGVKTQVLSLPISIN
>Mature_827_residues
MKSAYSTFIALIWSFFLIGCSGGGSISTDPDNPNPPEPTEVVTVTLSISNTESIKAEEPAEVTAVVTSSLNGPLAGKLVT
FKLDNGSIGTFVPGIGTDKTDGNGTAKVLLATSNIPGAGSLTVEVAGYSDVVSEPLVFVMEGDGGEVSNGASIVVSLTDT
NGAPIDAITTTIPGKVTATVSGINKPSIVTFETSIGDLPIKSAVTDANGKATVDIYAGSTLGAGEVIASLSSGEEGKAVV
VVGATNVVMGSGTPFEEGVANVSVDELTAGGTATISVAIQDENGNPFTQPVDVNFSSTCSTKPSPEAEISSPVPSVNGVA
TTTYLAKGCKGDDAINVTANAGGLNLAATATIKVLAADVGSIVFLSATPQNISILGTGGVESSVVQFKVLDTNSNPVSNQ
AVSFKLNTDVGGISLDPETATTNNQGIAQTVVRTGTVATSVRVTGTVVDSNPVISSQSSELVVSTGIPDQDSFSLSASVL
NAEGWDVDGTEVSVTARLADAFNNPVPDGTTISFTTEGGSIEDACQTKKGACSVIWTSQQARPEGYQLINGAGVIVNDPI
ATLSFDSNLGVYGNHYGQKYGGRATISATAIGEESFPDLNGNGRFDADEVTAFRTQTDVSGMPFDLDDAFNDYNEDGLFN
PQQDNGQLGGELEELIDFNSNGVFDVKDGKYNGVLCSNPVHDACADGVSDSKSLYVRGSLVIVMSGSSALATDPSRVLIV
DSYSGANGSYDQSIDIIGKATGTVYFTISDLHNQQMPAGSKVRFTASAGSVVSGSEYVWPSTNYNGGRQFSVTLKGEDEP
NSGTFLVTVETPGGVKTQVLSLPISIN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 84523; Mature: 84523

Theoretical pI: Translated: 3.90; Mature: 3.90

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS51127 BIG1 L=RR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSAYSTFIALIWSFFLIGCSGGGSISTDPDNPNPPEPTEVVTVTLSISNTESIKAEEPA
CCHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCC
EVTAVVTSSLNGPLAGKLVTFKLDNGSIGTFVPGIGTDKTDGNGTAKVLLATSNIPGAGS
EEEEEEEECCCCCCCCEEEEEEECCCCCEEEECCCCCCCCCCCCEEEEEEEECCCCCCCE
LTVEVAGYSDVVSEPLVFVMEGDGGEVSNGASIVVSLTDTNGAPIDAITTTIPGKVTATV
EEEEECCCHHHCCCCEEEEEECCCCCCCCCCEEEEEEECCCCCCCEEEEECCCCEEEEEE
SGINKPSIVTFETSIGDLPIKSAVTDANGKATVDIYAGSTLGAGEVIASLSSGEEGKAVV
ECCCCCEEEEEECCCCCCCCHHEEECCCCCEEEEEEECCCCCHHHHHHHHCCCCCCCEEE
VVGATNVVMGSGTPFEEGVANVSVDELTAGGTATISVAIQDENGNPFTQPVDVNFSSTCS
EEECCEEEEECCCCHHHCCCCCCHHHCCCCCEEEEEEEEECCCCCCCCCEEECCCCCCCC
TKPSPEAEISSPVPSVNGVATTTYLAKGCKGDDAINVTANAGGLNLAATATIKVLAADVG
CCCCCCCCCCCCCCCCCCEEEEHHHHCCCCCCCEEEEEECCCCCEEEEEEEEEEEEECCC
SIVFLSATPQNISILGTGGVESSVVQFKVLDTNSNPVSNQAVSFKLNTDVGGISLDPETA
CEEEEEECCCCEEEEECCCCCCCEEEEEEEECCCCCCCCCEEEEEEECCCCCEEECCCCC
TTNNQGIAQTVVRTGTVATSVRVTGTVVDSNPVISSQSSELVVSTGIPDQDSFSLSASVL
CCCCCCHHHHHHHCCCEEEEEEEEEEEEECCCCCCCCCCCEEEEECCCCCCCCEEEEEEE
NAEGWDVDGTEVSVTARLADAFNNPVPDGTTISFTTEGGSIEDACQTKKGACSVIWTSQQ
ECCCCCCCCCEEEEEEEEHHHHCCCCCCCCEEEEEECCCCHHHHHHCCCCCEEEEEECCC
ARPEGYQLINGAGVIVNDPIATLSFDSNLGVYGNHYGQKYGGRATISATAIGEESFPDLN
CCCCCEEEEECCCEEEECCEEEEEECCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCC
GNGRFDADEVTAFRTQTDVSGMPFDLDDAFNDYNEDGLFNPQQDNGQLGGELEELIDFNS
CCCCCCHHHEEEEEEECCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHCCCC
NGVFDVKDGKYNGVLCSNPVHDACADGVSDSKSLYVRGSLVIVMSGSSALATDPSRVLIV
CCEEEECCCCCCCEEECCCCHHHHHCCCCCCCEEEEEEEEEEEECCCCCEECCCCEEEEE
DSYSGANGSYDQSIDIIGKATGTVYFTISDLHNQQMPAGSKVRFTASAGSVVSGSEYVWP
ECCCCCCCCCCCEEEEEEECCCEEEEEEECCCCCCCCCCCEEEEEECCCCEECCCEEECC
STNYNGGRQFSVTLKGEDEPNSGTFLVTVETPGGVKTQVLSLPISIN
CCCCCCCEEEEEEECCCCCCCCCEEEEEEECCCCCEEEEEEEEEEEC
>Mature Secondary Structure
MKSAYSTFIALIWSFFLIGCSGGGSISTDPDNPNPPEPTEVVTVTLSISNTESIKAEEPA
CCHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCC
EVTAVVTSSLNGPLAGKLVTFKLDNGSIGTFVPGIGTDKTDGNGTAKVLLATSNIPGAGS
EEEEEEEECCCCCCCCEEEEEEECCCCCEEEECCCCCCCCCCCCEEEEEEEECCCCCCCE
LTVEVAGYSDVVSEPLVFVMEGDGGEVSNGASIVVSLTDTNGAPIDAITTTIPGKVTATV
EEEEECCCHHHCCCCEEEEEECCCCCCCCCCEEEEEEECCCCCCCEEEEECCCCEEEEEE
SGINKPSIVTFETSIGDLPIKSAVTDANGKATVDIYAGSTLGAGEVIASLSSGEEGKAVV
ECCCCCEEEEEECCCCCCCCHHEEECCCCCEEEEEEECCCCCHHHHHHHHCCCCCCCEEE
VVGATNVVMGSGTPFEEGVANVSVDELTAGGTATISVAIQDENGNPFTQPVDVNFSSTCS
EEECCEEEEECCCCHHHCCCCCCHHHCCCCCEEEEEEEEECCCCCCCCCEEECCCCCCCC
TKPSPEAEISSPVPSVNGVATTTYLAKGCKGDDAINVTANAGGLNLAATATIKVLAADVG
CCCCCCCCCCCCCCCCCCEEEEHHHHCCCCCCCEEEEEECCCCCEEEEEEEEEEEEECCC
SIVFLSATPQNISILGTGGVESSVVQFKVLDTNSNPVSNQAVSFKLNTDVGGISLDPETA
CEEEEEECCCCEEEEECCCCCCCEEEEEEEECCCCCCCCCEEEEEEECCCCCEEECCCCC
TTNNQGIAQTVVRTGTVATSVRVTGTVVDSNPVISSQSSELVVSTGIPDQDSFSLSASVL
CCCCCCHHHHHHHCCCEEEEEEEEEEEEECCCCCCCCCCCEEEEECCCCCCCCEEEEEEE
NAEGWDVDGTEVSVTARLADAFNNPVPDGTTISFTTEGGSIEDACQTKKGACSVIWTSQQ
ECCCCCCCCCEEEEEEEEHHHHCCCCCCCCEEEEEECCCCHHHHHHCCCCCEEEEEECCC
ARPEGYQLINGAGVIVNDPIATLSFDSNLGVYGNHYGQKYGGRATISATAIGEESFPDLN
CCCCCEEEEECCCEEEECCEEEEEECCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCC
GNGRFDADEVTAFRTQTDVSGMPFDLDDAFNDYNEDGLFNPQQDNGQLGGELEELIDFNS
CCCCCCHHHEEEEEEECCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHCCCC
NGVFDVKDGKYNGVLCSNPVHDACADGVSDSKSLYVRGSLVIVMSGSSALATDPSRVLIV
CCEEEECCCCCCCEEECCCCHHHHHCCCCCCCEEEEEEEEEEEECCCCCEECCCCEEEEE
DSYSGANGSYDQSIDIIGKATGTVYFTISDLHNQQMPAGSKVRFTASAGSVVSGSEYVWP
ECCCCCCCCCCCEEEEEEECCCEEEEEEECCCCCCCCCCCEEEEEECCCCEECCCEEECC
STNYNGGRQFSVTLKGEDEPNSGTFLVTVETPGGVKTQVLSLPISIN
CCCCCCCEEEEEEECCCCCCCCCEEEEEEECCCCCEEEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA