Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
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Accession | NC_010334 |
Length | 5,226,917 |
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The map label for this gene is 167623490
Identifier: 167623490
GI number: 167623490
Start: 1879638
End: 1879997
Strand: Direct
Name: 167623490
Synonym: Shal_1559
Alternate gene names: NA
Gene position: 1879638-1879997 (Clockwise)
Preceding gene: 167623489
Following gene: 167623491
Centisome position: 35.96
GC content: 44.72
Gene sequence:
>360_bases ATGAAACATAATCCGGCGTTTTTAGCTTTAGTAGAAAGTATTTTACCTCAGATCACCGAAGTGACAGTTGAGCAATATCA GTCGATGGCAGGCTGGGATTTACTTGACGTTCGAGAAGACTCGGAGTGGCAACAAGGCCGCTTACCTAATTCACAACACC TAGGACGTGGTATTATCGAGAGAGACATTGAAACGCGTTTTCCCGATAAACAAAGCCCATTGGTTTTGTATTGTGGCGGT GGCTATCGTTCAGCACTGGCTGCAAATAACCTTCAAGTTATGGGTTATTCGAAAGTGGTATCGTTGGCGGGTGGTTATAA AGCGTGGCTTGAGCGAAAATTGCCGATAGAACACGACTAA
Upstream 100 bases:
>100_bases AATGTCCCACATGGAAGTGTGTCAATTGCCATGAAATTAATGAATCAAGTTTCGAGCTCTGCTGGAATTGCAGTGCCGAA CGCAGTGAGAAATACAGTTA
Downstream 100 bases:
>100_bases ACAAGTCGTAAACTATCGCAAAGGTACAGCTCATCAATGCAATATTTTCCGCTATTTATAGATACTCAATCACTTAAAGT ACTTATAGTTGGGGCTGGTG
Product: rhodanese domain-containing protein
Products: NA
Alternate protein names: Rhodanese Domain Protein; Rhodanese-Like Protein; Molybdopterin Biosynthesis Protein MoeB; Rhodanese-Like Domain-Containing Protein; Molybdopterin Biosynthesis Protein; Metallo-Beta-Lactamase Superfamily Protein; Rhodanese-Related Sulfurtransferase; Molybdopterin Biosynthesis MoeB Protein; Rhodanese-Like Family Protein; Rhodanese/Sulfurtransferase-Like Protein; Beta-Lactamase-Like; Rhodanese-Domain Protein; Thiosulfate Sulfurtransferase GlpE; Rhodanese-Like Domain Protein; Rhodanese/Moeb/Thif Domain Protein; Beta-Lactamase Domain Protein
Number of amino acids: Translated: 119; Mature: 119
Protein sequence:
>119_residues MKHNPAFLALVESILPQITEVTVEQYQSMAGWDLLDVREDSEWQQGRLPNSQHLGRGIIERDIETRFPDKQSPLVLYCGG GYRSALAANNLQVMGYSKVVSLAGGYKAWLERKLPIEHD
Sequences:
>Translated_119_residues MKHNPAFLALVESILPQITEVTVEQYQSMAGWDLLDVREDSEWQQGRLPNSQHLGRGIIERDIETRFPDKQSPLVLYCGG GYRSALAANNLQVMGYSKVVSLAGGYKAWLERKLPIEHD >Mature_119_residues MKHNPAFLALVESILPQITEVTVEQYQSMAGWDLLDVREDSEWQQGRLPNSQHLGRGIIERDIETRFPDKQSPLVLYCGG GYRSALAANNLQVMGYSKVVSLAGGYKAWLERKLPIEHD
Specific function: Unknown
COG id: COG0607
COG function: function code P; Rhodanese-related sulfurtransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13441; Mature: 13441
Theoretical pI: Translated: 5.64; Mature: 5.64
Prosite motif: PS50206 RHODANESE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKHNPAFLALVESILPQITEVTVEQYQSMAGWDLLDVREDSEWQQGRLPNSQHLGRGIIE CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCHHHHHHHHHH RDIETRFPDKQSPLVLYCGGGYRSALAANNLQVMGYSKVVSLAGGYKAWLERKLPIEHD HHHHHCCCCCCCCEEEEECCCCHHHHHCCCEEEECHHHHHHHCCCHHHHHHCCCCCCCC >Mature Secondary Structure MKHNPAFLALVESILPQITEVTVEQYQSMAGWDLLDVREDSEWQQGRLPNSQHLGRGIIE CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCHHHHHHHHHH RDIETRFPDKQSPLVLYCGGGYRSALAANNLQVMGYSKVVSLAGGYKAWLERKLPIEHD HHHHHCCCCCCCCEEEEECCCCHHHHHCCCEEEECHHHHHHHCCCHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA