The gene/protein map for NC_010334 is currently unavailable.
Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

Click here to switch to the map view.

The map label for this gene is 167623490

Identifier: 167623490

GI number: 167623490

Start: 1879638

End: 1879997

Strand: Direct

Name: 167623490

Synonym: Shal_1559

Alternate gene names: NA

Gene position: 1879638-1879997 (Clockwise)

Preceding gene: 167623489

Following gene: 167623491

Centisome position: 35.96

GC content: 44.72

Gene sequence:

>360_bases
ATGAAACATAATCCGGCGTTTTTAGCTTTAGTAGAAAGTATTTTACCTCAGATCACCGAAGTGACAGTTGAGCAATATCA
GTCGATGGCAGGCTGGGATTTACTTGACGTTCGAGAAGACTCGGAGTGGCAACAAGGCCGCTTACCTAATTCACAACACC
TAGGACGTGGTATTATCGAGAGAGACATTGAAACGCGTTTTCCCGATAAACAAAGCCCATTGGTTTTGTATTGTGGCGGT
GGCTATCGTTCAGCACTGGCTGCAAATAACCTTCAAGTTATGGGTTATTCGAAAGTGGTATCGTTGGCGGGTGGTTATAA
AGCGTGGCTTGAGCGAAAATTGCCGATAGAACACGACTAA

Upstream 100 bases:

>100_bases
AATGTCCCACATGGAAGTGTGTCAATTGCCATGAAATTAATGAATCAAGTTTCGAGCTCTGCTGGAATTGCAGTGCCGAA
CGCAGTGAGAAATACAGTTA

Downstream 100 bases:

>100_bases
ACAAGTCGTAAACTATCGCAAAGGTACAGCTCATCAATGCAATATTTTCCGCTATTTATAGATACTCAATCACTTAAAGT
ACTTATAGTTGGGGCTGGTG

Product: rhodanese domain-containing protein

Products: NA

Alternate protein names: Rhodanese Domain Protein; Rhodanese-Like Protein; Molybdopterin Biosynthesis Protein MoeB; Rhodanese-Like Domain-Containing Protein; Molybdopterin Biosynthesis Protein; Metallo-Beta-Lactamase Superfamily Protein; Rhodanese-Related Sulfurtransferase; Molybdopterin Biosynthesis MoeB Protein; Rhodanese-Like Family Protein; Rhodanese/Sulfurtransferase-Like Protein; Beta-Lactamase-Like; Rhodanese-Domain Protein; Thiosulfate Sulfurtransferase GlpE; Rhodanese-Like Domain Protein; Rhodanese/Moeb/Thif Domain Protein; Beta-Lactamase Domain Protein

Number of amino acids: Translated: 119; Mature: 119

Protein sequence:

>119_residues
MKHNPAFLALVESILPQITEVTVEQYQSMAGWDLLDVREDSEWQQGRLPNSQHLGRGIIERDIETRFPDKQSPLVLYCGG
GYRSALAANNLQVMGYSKVVSLAGGYKAWLERKLPIEHD

Sequences:

>Translated_119_residues
MKHNPAFLALVESILPQITEVTVEQYQSMAGWDLLDVREDSEWQQGRLPNSQHLGRGIIERDIETRFPDKQSPLVLYCGG
GYRSALAANNLQVMGYSKVVSLAGGYKAWLERKLPIEHD
>Mature_119_residues
MKHNPAFLALVESILPQITEVTVEQYQSMAGWDLLDVREDSEWQQGRLPNSQHLGRGIIERDIETRFPDKQSPLVLYCGG
GYRSALAANNLQVMGYSKVVSLAGGYKAWLERKLPIEHD

Specific function: Unknown

COG id: COG0607

COG function: function code P; Rhodanese-related sulfurtransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13441; Mature: 13441

Theoretical pI: Translated: 5.64; Mature: 5.64

Prosite motif: PS50206 RHODANESE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHNPAFLALVESILPQITEVTVEQYQSMAGWDLLDVREDSEWQQGRLPNSQHLGRGIIE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCHHHHHHHHHH
RDIETRFPDKQSPLVLYCGGGYRSALAANNLQVMGYSKVVSLAGGYKAWLERKLPIEHD
HHHHHCCCCCCCCEEEEECCCCHHHHHCCCEEEECHHHHHHHCCCHHHHHHCCCCCCCC
>Mature Secondary Structure
MKHNPAFLALVESILPQITEVTVEQYQSMAGWDLLDVREDSEWQQGRLPNSQHLGRGIIE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCHHHHHHHHHH
RDIETRFPDKQSPLVLYCGGGYRSALAANNLQVMGYSKVVSLAGGYKAWLERKLPIEHD
HHHHHCCCCCCCCEEEEECCCCHHHHHCCCEEEECHHHHHHHCCCHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA