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The map label for this gene is ylbK [H]

Identifier: 167622420

GI number: 167622420

Start: 574277

End: 576493

Strand: Direct

Name: ylbK [H]

Synonym: Shal_0480

Alternate gene names: 167622420

Gene position: 574277-576493 (Clockwise)

Preceding gene: 167622419

Following gene: 167622422

Centisome position: 10.99

GC content: 45.15

Gene sequence:

>2217_bases
ATGATACATAGAATTATTATTCTTTGTTTAGCCATTGCTAGCCCCCACGTTGCATTCGCAGAAGAACGCCCAAAAATTGG
TTTAGTTTTGAGTGGCGGTGGTGCTAAGGGGGCCGCACATATCGGGGTGCTTAAAGTCCTCGAAGAAAAGCAGATCCCCA
TCGATTATATAACGGGTACCAGTATCGGTGCTTATGTGGGCGGTATGTATGCGTTAGGTTATAGTGCCGCCGAAATTGAA
GCTATCATGATGAACACAGATTGGAGTCAAGGCTATTCAGATACTATTCCCAGAGAATCATTAAGTTATCGCGATAAAGA
AACGCGTGATCAGTTTAATATTCCACTTAATGTTGGTTATAGCGATGAGCAGGTAAAAACCCCAGCCGGTTTGCTGCGTG
GTCAAACCATGTCCCAGTTGCTGCGCAGCTCTACAGATCTGGTGCATCAGTTTGGTGATTTTGATGATCTATCTATCCCT
TATAGAGCGGTTGCGACTAATTTAGCGACTAGCGAGCCGGTGGTGTTAAGTTCTGGGAGCGTCGTTGCAGCAATGCAGGC
GTCGGCGACGGTACCTGGAGCGTTGCAACCTGCAGTTATTGACGGCAAGCTGCTAGTCGATGGTGGTATTGCCAACAATA
TGCCTATCGATGTGGTCAAGGCCATGGGGGCCGATATAGTTATCGCCGTCGATATAGGCTCACCCTTGATGGACAAATCT
GAACTTAACAGTACGATTGCAGTGCTCAATCAATTATCAACAATCCTTACCAATGCCAGTTCAGATAGACAAAAAGCGCT
ATTAACCGATCATGATATCTTGATCCGTCCGAATATTGGCGAACTGAGTACAACAGACTTTAGCATTATGCCAATCGCAC
TCCCCTTAGGAGAGATTGCCGCGCGAGAGCAGGTTGGCAAGCTCGAACAATACAGTGTAGAGAATACTGAATACAAACAG
TATTTAGCTGATAAAAAAGAGAAGAGTCTGCAATGGCTTGCGGATATTGATCGACCATTGATTAAAGTCATTTATGACAA
TGATTCTAAGATCAGCGAGAAATTACTGGCTGATAATTTAGAGTTGGACGTAGGGGACAACGTGACAGTTGAAGCCTTAG
AAGCTGGCTTAGATAGAATTTATGCTCTGAATAAATTTGAACGGGTGGATGCCGAATTTACAGATACTGAAGATGGGCGT
GTGTTAACCGTGACGACCAAGGCAAAATCTTGGGGGCCAAACTTTTTTCAGCTTGGCTTTAGTTGGGAAGATGACTTTAG
TCTAGACTCGGTAATATCACTCGACATGGCTTATACCATGACAGAGCTAACAGAAAATGGCGGTGAGTGGCGCAATGAAG
TTTCACTCGGATTCGATAAGTTAATTGCCTCGGAGTTTTATCAGCCGCTTGTAAAAGATCAAACTTACTTTAGCCGGGCA
CGGGTGGAGTATGAGCTCAAAGACTGGAGCTTTTTTGAGAACAATAATCGGGTGTTAGAGCTGAAGCAAACGGCCTATCG
CACTGAGTTGGGCATAGGCATCAATTACACTCAAAATGGTATGGTTGAAATCGGCATACTAGGTGAAATGGGCGATCTTG
AAAACGATCTCTGGGGTTTTGGTAAGGTGGATTACGATGGTTATGGTGGCTATTTTAAGTTTGCCTATGATGACTTAAAC
AGCATCAACTTTCCCACATCGGGTAACCGCTTTACCTTCAATGTGTACATGAGGAAGGAGGGCTATGAGCTTGATGGTGT
CGGTGACTCCTCTGATTTCTCTATGCAGTATGAGGCTGACTGGCGTGGAGCCGTTGGGGTGGGTAACCACGCCTTTGTGG
GTATAGCATCACTGGCAACGGTTGATAAAGACGGTGCATTTACCGTTAACGTGTCTGAGCTTGGCGGATTTTTAAATCTT
TCCGGTTACCACAAGAATGCACTGTATGGTTCGCATAAAATTTTTGGTGCCTTTGTCTATCAGTATGACTTAGGCCGAGA
TGTACTGGGCATGACCGAATATCCACTCTACTTGGGTACCAGTATCGAGGCGGGTAATGTGTGGAACCAAAAAGATAGCG
TGTCGTTAGAGGATTTGATCTATGCCGGAAGCTTGTACTTAGGTATCGATACCAGCGTCGGCCCCGCCGCCTTTGGTTTT
GGCGCGTCAGATGATGGTGAAAAAACCGTATTCTTGTTTATCGGTAAGAATTGGTAA

Upstream 100 bases:

>100_bases
GGTTTAAATCGAAATTTGTTTGTCATTCCTTGCTATCACTTGCGTATAGACACTAAATAAAATACGTTAATACATCATCA
GAAGAGTCGAATAAGTCATT

Downstream 100 bases:

>100_bases
GCTTACCTTGTTCTATTTAAAGCCCGTCGAAAGATGGGCTTTTTGTTTTCAGCCCTAAGTCACCCTCTTCAAAACTCAAT
ACCGATAAGTATTAGAGTTG

Product: patatin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 738; Mature: 738

Protein sequence:

>738_residues
MIHRIIILCLAIASPHVAFAEERPKIGLVLSGGGAKGAAHIGVLKVLEEKQIPIDYITGTSIGAYVGGMYALGYSAAEIE
AIMMNTDWSQGYSDTIPRESLSYRDKETRDQFNIPLNVGYSDEQVKTPAGLLRGQTMSQLLRSSTDLVHQFGDFDDLSIP
YRAVATNLATSEPVVLSSGSVVAAMQASATVPGALQPAVIDGKLLVDGGIANNMPIDVVKAMGADIVIAVDIGSPLMDKS
ELNSTIAVLNQLSTILTNASSDRQKALLTDHDILIRPNIGELSTTDFSIMPIALPLGEIAAREQVGKLEQYSVENTEYKQ
YLADKKEKSLQWLADIDRPLIKVIYDNDSKISEKLLADNLELDVGDNVTVEALEAGLDRIYALNKFERVDAEFTDTEDGR
VLTVTTKAKSWGPNFFQLGFSWEDDFSLDSVISLDMAYTMTELTENGGEWRNEVSLGFDKLIASEFYQPLVKDQTYFSRA
RVEYELKDWSFFENNNRVLELKQTAYRTELGIGINYTQNGMVEIGILGEMGDLENDLWGFGKVDYDGYGGYFKFAYDDLN
SINFPTSGNRFTFNVYMRKEGYELDGVGDSSDFSMQYEADWRGAVGVGNHAFVGIASLATVDKDGAFTVNVSELGGFLNL
SGYHKNALYGSHKIFGAFVYQYDLGRDVLGMTEYPLYLGTSIEAGNVWNQKDSVSLEDLIYAGSLYLGIDTSVGPAAFGF
GASDDGEKTVFLFIGKNW

Sequences:

>Translated_738_residues
MIHRIIILCLAIASPHVAFAEERPKIGLVLSGGGAKGAAHIGVLKVLEEKQIPIDYITGTSIGAYVGGMYALGYSAAEIE
AIMMNTDWSQGYSDTIPRESLSYRDKETRDQFNIPLNVGYSDEQVKTPAGLLRGQTMSQLLRSSTDLVHQFGDFDDLSIP
YRAVATNLATSEPVVLSSGSVVAAMQASATVPGALQPAVIDGKLLVDGGIANNMPIDVVKAMGADIVIAVDIGSPLMDKS
ELNSTIAVLNQLSTILTNASSDRQKALLTDHDILIRPNIGELSTTDFSIMPIALPLGEIAAREQVGKLEQYSVENTEYKQ
YLADKKEKSLQWLADIDRPLIKVIYDNDSKISEKLLADNLELDVGDNVTVEALEAGLDRIYALNKFERVDAEFTDTEDGR
VLTVTTKAKSWGPNFFQLGFSWEDDFSLDSVISLDMAYTMTELTENGGEWRNEVSLGFDKLIASEFYQPLVKDQTYFSRA
RVEYELKDWSFFENNNRVLELKQTAYRTELGIGINYTQNGMVEIGILGEMGDLENDLWGFGKVDYDGYGGYFKFAYDDLN
SINFPTSGNRFTFNVYMRKEGYELDGVGDSSDFSMQYEADWRGAVGVGNHAFVGIASLATVDKDGAFTVNVSELGGFLNL
SGYHKNALYGSHKIFGAFVYQYDLGRDVLGMTEYPLYLGTSIEAGNVWNQKDSVSLEDLIYAGSLYLGIDTSVGPAAFGF
GASDDGEKTVFLFIGKNW
>Mature_738_residues
MIHRIIILCLAIASPHVAFAEERPKIGLVLSGGGAKGAAHIGVLKVLEEKQIPIDYITGTSIGAYVGGMYALGYSAAEIE
AIMMNTDWSQGYSDTIPRESLSYRDKETRDQFNIPLNVGYSDEQVKTPAGLLRGQTMSQLLRSSTDLVHQFGDFDDLSIP
YRAVATNLATSEPVVLSSGSVVAAMQASATVPGALQPAVIDGKLLVDGGIANNMPIDVVKAMGADIVIAVDIGSPLMDKS
ELNSTIAVLNQLSTILTNASSDRQKALLTDHDILIRPNIGELSTTDFSIMPIALPLGEIAAREQVGKLEQYSVENTEYKQ
YLADKKEKSLQWLADIDRPLIKVIYDNDSKISEKLLADNLELDVGDNVTVEALEAGLDRIYALNKFERVDAEFTDTEDGR
VLTVTTKAKSWGPNFFQLGFSWEDDFSLDSVISLDMAYTMTELTENGGEWRNEVSLGFDKLIASEFYQPLVKDQTYFSRA
RVEYELKDWSFFENNNRVLELKQTAYRTELGIGINYTQNGMVEIGILGEMGDLENDLWGFGKVDYDGYGGYFKFAYDDLN
SINFPTSGNRFTFNVYMRKEGYELDGVGDSSDFSMQYEADWRGAVGVGNHAFVGIASLATVDKDGAFTVNVSELGGFLNL
SGYHKNALYGSHKIFGAFVYQYDLGRDVLGMTEYPLYLGTSIEAGNVWNQKDSVSLEDLIYAGSLYLGIDTSVGPAAFGF
GASDDGEKTVFLFIGKNW

Specific function: Unknown

COG id: COG1752

COG function: function code R; Predicted esterase of the alpha-beta hydrolase superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 patatin domain [H]

Homologues:

Organism=Homo sapiens, GI148727335, Length=290, Percent_Identity=32.4137931034483, Blast_Score=118, Evalue=3e-26,
Organism=Homo sapiens, GI148727290, Length=290, Percent_Identity=32.4137931034483, Blast_Score=117, Evalue=4e-26,
Organism=Homo sapiens, GI260656039, Length=224, Percent_Identity=34.375, Blast_Score=116, Evalue=7e-26,
Organism=Homo sapiens, GI260656043, Length=224, Percent_Identity=34.375, Blast_Score=116, Evalue=8e-26,
Organism=Homo sapiens, GI260656041, Length=224, Percent_Identity=34.375, Blast_Score=116, Evalue=8e-26,
Organism=Homo sapiens, GI260656037, Length=224, Percent_Identity=34.375, Blast_Score=116, Evalue=8e-26,
Organism=Homo sapiens, GI116256487, Length=224, Percent_Identity=34.375, Blast_Score=116, Evalue=8e-26,
Organism=Escherichia coli, GI226510936, Length=324, Percent_Identity=28.7037037037037, Blast_Score=107, Evalue=3e-24,
Organism=Caenorhabditis elegans, GI71997299, Length=291, Percent_Identity=28.8659793814433, Blast_Score=84, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI71997289, Length=194, Percent_Identity=33.5051546391753, Blast_Score=84, Evalue=4e-16,
Organism=Caenorhabditis elegans, GI193204778, Length=210, Percent_Identity=30.952380952381, Blast_Score=74, Evalue=3e-13,
Organism=Saccharomyces cerevisiae, GI6323581, Length=293, Percent_Identity=29.3515358361775, Blast_Score=100, Evalue=1e-21,
Organism=Drosophila melanogaster, GI28571388, Length=213, Percent_Identity=31.924882629108, Blast_Score=85, Evalue=2e-16,
Organism=Drosophila melanogaster, GI281376913, Length=213, Percent_Identity=31.4553990610329, Blast_Score=82, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016035
- InterPro:   IPR001423
- InterPro:   IPR002641 [H]

Pfam domain/function: PF01734 Patatin [H]

EC number: NA

Molecular weight: Translated: 81022; Mature: 81022

Theoretical pI: Translated: 4.22; Mature: 4.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIHRIIILCLAIASPHVAFAEERPKIGLVLSGGGAKGAAHIGVLKVLEEKQIPIDYITGT
CHHHHHHHHHHHCCCCEEECCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEECC
SIGAYVGGMYALGYSAAEIEAIMMNTDWSQGYSDTIPRESLSYRDKETRDQFNIPLNVGY
CHHHHHHHHHHHCCCHHHEEEEEEECCCCCCCCCCCCCCHHCCCCCCCCCCCCCEEECCC
SDEQVKTPAGLLRGQTMSQLLRSSTDLVHQFGDFDDLSIPYRAVATNLATSEPVVLSSGS
CCCCCCCCHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCEEEECCC
VVAAMQASATVPGALQPAVIDGKLLVDGGIANNMPIDVVKAMGADIVIAVDIGSPLMDKS
EEEEEECCCCCCCCCCCEEECCEEEEECCCCCCCCHHHHHHCCCCEEEEEECCCCCCCHH
ELNSTIAVLNQLSTILTNASSDRQKALLTDHDILIRPNIGELSTTDFSIMPIALPLGEIA
HHHHHHHHHHHHHHHHHCCCCCHHHEEECCCCEEEECCCCCCCCCCEEEEEEECCHHHHH
AREQVGKLEQYSVENTEYKQYLADKKEKSLQWLADIDRPLIKVIYDNDSKISEKLLADNL
HHHHHCCHHHHCCCCHHHHHHHHCCHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHCCC
ELDVGDNVTVEALEAGLDRIYALNKFERVDAEFTDTEDGRVLTVTTKAKSWGPNFFQLGF
EEECCCCCCHHHHHHHHHHHHHHCHHHHCCCCCCCCCCCEEEEEEECCCCCCCCEEEECC
SWEDDFSLDSVISLDMAYTMTELTENGGEWRNEVSLGFDKLIASEFYQPLVKDQTYFSRA
CCCCCCCCHHHEEHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHE
RVEYELKDWSFFENNNRVLELKQTAYRTELGIGINYTQNGMVEIGILGEMGDLENDLWGF
EEEEEECCCEEEECCCEEEEEEHHHHHHHCCCEEEECCCCEEEEEEECCCCCCCCCCCCC
GKVDYDGYGGYFKFAYDDLNSINFPTSGNRFTFNVYMRKEGYELDGVGDSSDFSMQYEAD
CCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEEEEEECCCCEECCCCCCCCCEEEEECC
WRGAVGVGNHAFVGIASLATVDKDGAFTVNVSELGGFLNLSGYHKNALYGSHKIFGAFVY
CCCCCCCCCCCEEEEEHHEEECCCCCEEEEHHHHCCEEEECCCCCCCCCCCCEEEEEEEE
QYDLGRDVLGMTEYPLYLGTSIEAGNVWNQKDSVSLEDLIYAGSLYLGIDTSVGPAAFGF
EEECCCCCCCCCCCCEEEECEECCCCCCCCCCCCCHHHHEEECEEEEEECCCCCCHHCCC
GASDDGEKTVFLFIGKNW
CCCCCCCEEEEEEEECCC
>Mature Secondary Structure
MIHRIIILCLAIASPHVAFAEERPKIGLVLSGGGAKGAAHIGVLKVLEEKQIPIDYITGT
CHHHHHHHHHHHCCCCEEECCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEECC
SIGAYVGGMYALGYSAAEIEAIMMNTDWSQGYSDTIPRESLSYRDKETRDQFNIPLNVGY
CHHHHHHHHHHHCCCHHHEEEEEEECCCCCCCCCCCCCCHHCCCCCCCCCCCCCEEECCC
SDEQVKTPAGLLRGQTMSQLLRSSTDLVHQFGDFDDLSIPYRAVATNLATSEPVVLSSGS
CCCCCCCCHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCEEEECCC
VVAAMQASATVPGALQPAVIDGKLLVDGGIANNMPIDVVKAMGADIVIAVDIGSPLMDKS
EEEEEECCCCCCCCCCCEEECCEEEEECCCCCCCCHHHHHHCCCCEEEEEECCCCCCCHH
ELNSTIAVLNQLSTILTNASSDRQKALLTDHDILIRPNIGELSTTDFSIMPIALPLGEIA
HHHHHHHHHHHHHHHHHCCCCCHHHEEECCCCEEEECCCCCCCCCCEEEEEEECCHHHHH
AREQVGKLEQYSVENTEYKQYLADKKEKSLQWLADIDRPLIKVIYDNDSKISEKLLADNL
HHHHHCCHHHHCCCCHHHHHHHHCCHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHCCC
ELDVGDNVTVEALEAGLDRIYALNKFERVDAEFTDTEDGRVLTVTTKAKSWGPNFFQLGF
EEECCCCCCHHHHHHHHHHHHHHCHHHHCCCCCCCCCCCEEEEEEECCCCCCCCEEEECC
SWEDDFSLDSVISLDMAYTMTELTENGGEWRNEVSLGFDKLIASEFYQPLVKDQTYFSRA
CCCCCCCCHHHEEHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHE
RVEYELKDWSFFENNNRVLELKQTAYRTELGIGINYTQNGMVEIGILGEMGDLENDLWGF
EEEEEECCCEEEECCCEEEEEEHHHHHHHCCCEEEECCCCEEEEEEECCCCCCCCCCCCC
GKVDYDGYGGYFKFAYDDLNSINFPTSGNRFTFNVYMRKEGYELDGVGDSSDFSMQYEAD
CCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEEEEEECCCCEECCCCCCCCCEEEEECC
WRGAVGVGNHAFVGIASLATVDKDGAFTVNVSELGGFLNLSGYHKNALYGSHKIFGAFVY
CCCCCCCCCCCEEEEEHHEEECCCCCEEEEHHHHCCEEEECCCCCCCCCCCCEEEEEEEE
QYDLGRDVLGMTEYPLYLGTSIEAGNVWNQKDSVSLEDLIYAGSLYLGIDTSVGPAAFGF
EEECCCCCCCCCCCCEEEECEECCCCCCCCCCCCCHHHHEEECEEEEEECCCCCCHHCCC
GASDDGEKTVFLFIGKNW
CCCCCCCEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]