| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
Click here to switch to the map view.
The map label for this gene is ftsI [H]
Identifier: 167622389
GI number: 167622389
Start: 526021
End: 527757
Strand: Direct
Name: ftsI [H]
Synonym: Shal_0449
Alternate gene names: 167622389
Gene position: 526021-527757 (Clockwise)
Preceding gene: 167622388
Following gene: 167622390
Centisome position: 10.06
GC content: 47.5
Gene sequence:
>1737_bases ATGAGCAAACAGGCAAAGCGTAAACAGAAACCACAGTTAATCCAATGGCGTTTATACGTCGTGGTGGCTTTTGTCTGCCT GTTGTTTACAAGTTTGGTTGGTCGAGCCGCTTACATTCAAATCATCGAGCCCGAAATGCTACGCCACCAAAGTGACATGC GCACATTGCGTACCACGAGTCGTGAAGTGCAACGTGGCTTAATCACCGACCGTAATGGTGAAATGTTAGCGGTGAGTGTG CCAGTAAAAGCGGTATACGCCGATCCTAAAGTTATACATGATGAGGATGGTTTTGCCGATATGCGTCGTTGGCAAGCATT AGCAGACGTACTGCATGAACCGAAAGAAGATATCCTTAAACGAGTTCAATCGAATCCTCGTAAGCGTTTTACCTACCTTA AACGTCAAGTAACCCCTGCAGTTGCTAATTATATTCAGCAATTGGATTTACCGGGTGTTTACCTTAAACCTGAGTCACGT CGCTACTATCCAACTGGTGAGATCACGGCGCAATTGGTGGGGATCACCAATATCGATGACAAAGGCATCGAAGGGCTAGA AAATACCTATGACGACTGGCTTACTGGCACGCCGAGTAAGCAAAAAGTACGTAAGTCTCGTGATGGTCACGTAGTTGAGC GCCTAGACATGGTGCAAGAGGGTGAAAGCCCTAATGACTTAGTGCTGAGTATCGATCAGCGCATCCAGCAGCTGGCTTAT CGAGAGCTTAAAAAAGCCACTGAGATCAACCAAGCCACATCGGGCTCAATCGTGGTGCTAGATGTACTAACGGGGGAAGT GTTAGCGATGGCAAATACGCCATCATATAATCCCAACTCTCGTGAAAACCTACAGAGCTATCGCATGCGAAATAGGGCTT TGACTGATGCCTATGAACCGGGTTCAACCATCAAACCATTTGTGGTTGCTGCAGCACTCGATGCCGGAACAATTAAGACA GATCAAATCATTAAGACCAACCCCGGGCGTATGCGTATCGGTGGCAAAATTGTACGTGATGGGCGTAACTACGGTGATTT ATCTTTGAGCGGCGTATTAGTTCACTCAAGCAACGTTGGTATGACTAAAATTGCGTTGTCTATGCCAGTACAAGAGTTAT TGGGCGCCTACCAAACAATGGGGCTCGGTAATTATTCAGGGATTAATTTAGAGGGTGAAAGCGCAGGCCTTATCCATGAC CGTCGTCGCTGGTCTGAATTTGAGCGCGCCACTTTGTCATTTGGTTATGGCTTGATGGCCACACCACTGCAGCTTGCCAG AATGTATGCCACTTTGGGAAATAAAGGCGTGCAGTATCCCGTGTCAATTTTAAAACTAAAACAAGCGCCACAAGGCACAC AAGTCATTTCACCACAGGTCGCGCAAGATGTCATGGAGATGCTGGTGGGGGTGACCGAAAAAGGTGGCACCGCACGTAAG GCACACATTGAAGGTTATCCTGTTGCGGGTAAAACCGGTACCGCTCGTAAGGCTGTTGCTGGCGGGTATGGTGAAGACTA TGTGGCAATATTTGCCGGTGTGGCCCCTGTACATACACCGAAATTAGCCATTACCGTGGTGATAAATGAACCTAAAGGTG ATCGTTATTACGGTGGCGATGTCGCCGCTCCGGTTTTTGCGGCCGTCATGTCAGGTGCCTTACAAATGCTAAACGTTGAG CCTATTTCAAAACGTGAGAAGGTCCGTTTAGCAGCTAATTCTAGGAGTGTTGAATAA
Upstream 100 bases:
>100_bases AGCAGTCACGTTCTGAACATAGCCGGATAACTCGGATAGCGACCAAAGAGCTAAATATGAATCGTCCGCTACCCAAAGAT GAGGTTGTCGTAAGAGTGCC
Downstream 100 bases:
>100_bases TGCTAATTCGCGATCTATTAGCGCCTTGGTTTCATTATTCGGGAGCCGAAGAGTTCTCTGAGCTCACATTAGATAGTCGT GCTGTTCAGTCCGGCTCGCT
Product: peptidoglycan glycosyltransferase
Products: NA
Alternate protein names: Penicillin-binding protein 3; PBP-3; Peptidoglycan glycosyltransferase 3 [H]
Number of amino acids: Translated: 578; Mature: 577
Protein sequence:
>578_residues MSKQAKRKQKPQLIQWRLYVVVAFVCLLFTSLVGRAAYIQIIEPEMLRHQSDMRTLRTTSREVQRGLITDRNGEMLAVSV PVKAVYADPKVIHDEDGFADMRRWQALADVLHEPKEDILKRVQSNPRKRFTYLKRQVTPAVANYIQQLDLPGVYLKPESR RYYPTGEITAQLVGITNIDDKGIEGLENTYDDWLTGTPSKQKVRKSRDGHVVERLDMVQEGESPNDLVLSIDQRIQQLAY RELKKATEINQATSGSIVVLDVLTGEVLAMANTPSYNPNSRENLQSYRMRNRALTDAYEPGSTIKPFVVAAALDAGTIKT DQIIKTNPGRMRIGGKIVRDGRNYGDLSLSGVLVHSSNVGMTKIALSMPVQELLGAYQTMGLGNYSGINLEGESAGLIHD RRRWSEFERATLSFGYGLMATPLQLARMYATLGNKGVQYPVSILKLKQAPQGTQVISPQVAQDVMEMLVGVTEKGGTARK AHIEGYPVAGKTGTARKAVAGGYGEDYVAIFAGVAPVHTPKLAITVVINEPKGDRYYGGDVAAPVFAAVMSGALQMLNVE PISKREKVRLAANSRSVE
Sequences:
>Translated_578_residues MSKQAKRKQKPQLIQWRLYVVVAFVCLLFTSLVGRAAYIQIIEPEMLRHQSDMRTLRTTSREVQRGLITDRNGEMLAVSV PVKAVYADPKVIHDEDGFADMRRWQALADVLHEPKEDILKRVQSNPRKRFTYLKRQVTPAVANYIQQLDLPGVYLKPESR RYYPTGEITAQLVGITNIDDKGIEGLENTYDDWLTGTPSKQKVRKSRDGHVVERLDMVQEGESPNDLVLSIDQRIQQLAY RELKKATEINQATSGSIVVLDVLTGEVLAMANTPSYNPNSRENLQSYRMRNRALTDAYEPGSTIKPFVVAAALDAGTIKT DQIIKTNPGRMRIGGKIVRDGRNYGDLSLSGVLVHSSNVGMTKIALSMPVQELLGAYQTMGLGNYSGINLEGESAGLIHD RRRWSEFERATLSFGYGLMATPLQLARMYATLGNKGVQYPVSILKLKQAPQGTQVISPQVAQDVMEMLVGVTEKGGTARK AHIEGYPVAGKTGTARKAVAGGYGEDYVAIFAGVAPVHTPKLAITVVINEPKGDRYYGGDVAAPVFAAVMSGALQMLNVE PISKREKVRLAANSRSVE >Mature_577_residues SKQAKRKQKPQLIQWRLYVVVAFVCLLFTSLVGRAAYIQIIEPEMLRHQSDMRTLRTTSREVQRGLITDRNGEMLAVSVP VKAVYADPKVIHDEDGFADMRRWQALADVLHEPKEDILKRVQSNPRKRFTYLKRQVTPAVANYIQQLDLPGVYLKPESRR YYPTGEITAQLVGITNIDDKGIEGLENTYDDWLTGTPSKQKVRKSRDGHVVERLDMVQEGESPNDLVLSIDQRIQQLAYR ELKKATEINQATSGSIVVLDVLTGEVLAMANTPSYNPNSRENLQSYRMRNRALTDAYEPGSTIKPFVVAAALDAGTIKTD QIIKTNPGRMRIGGKIVRDGRNYGDLSLSGVLVHSSNVGMTKIALSMPVQELLGAYQTMGLGNYSGINLEGESAGLIHDR RRWSEFERATLSFGYGLMATPLQLARMYATLGNKGVQYPVSILKLKQAPQGTQVISPQVAQDVMEMLVGVTEKGGTARKA HIEGYPVAGKTGTARKAVAGGYGEDYVAIFAGVAPVHTPKLAITVVINEPKGDRYYGGDVAAPVFAAVMSGALQMLNVEP ISKREKVRLAANSRSVE
Specific function: Cell wall formation. Essential for the formation of a septum of the murein sacculus. Synthesis of cross-linked peptidoglycan from the lipid intermediates [H]
COG id: COG0768
COG function: function code M; Cell division protein FtsI/penicillin-binding protein 2
Gene ontology:
Cell location: Cell inner membrane; Single-pass membrane protein; Periplasmic side. Note=The bulk of the molecule, except for the N-terminal membrane anchor region, protrudes into the periplasmic space, where it acts on murein (By similarity) [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transpeptidase family [H]
Homologues:
Organism=Escherichia coli, GI1786272, Length=567, Percent_Identity=48.1481481481481, Blast_Score=554, Evalue=1e-159, Organism=Escherichia coli, GI1786854, Length=590, Percent_Identity=27.1186440677966, Blast_Score=139, Evalue=5e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012338 - InterPro: IPR005311 - InterPro: IPR001460 [H]
Pfam domain/function: PF03717 PBP_dimer; PF00905 Transpeptidase [H]
EC number: =2.4.1.129 [H]
Molecular weight: Translated: 63804; Mature: 63673
Theoretical pI: Translated: 9.85; Mature: 9.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKQAKRKQKPQLIQWRLYVVVAFVCLLFTSLVGRAAYIQIIEPEMLRHQSDMRTLRTTS CCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECHHHHHHHHHHHHHHHHH REVQRGLITDRNGEMLAVSVPVKAVYADPKVIHDEDGFADMRRWQALADVLHEPKEDILK HHHHHCCCCCCCCCEEEEECCEEEEECCCCEEECCCCHHHHHHHHHHHHHHHCCHHHHHH RVQSNPRKRFTYLKRQVTPAVANYIQQLDLPGVYLKPESRRYYPTGEITAQLVGITNIDD HHHCCHHHHHHHHHHHHCHHHHHHHHHCCCCCEEECCCCCCCCCCCCCEEEEEEECCCCC KGIEGLENTYDDWLTGTPSKQKVRKSRDGHVVERLDMVQEGESPNDLVLSIDQRIQQLAY CCCCHHHHHHHHHCCCCCCHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHH RELKKATEINQATSGSIVVLDVLTGEVLAMANTPSYNPNSRENLQSYRMRNRALTDAYEP HHHHHHHHHCCCCCCCEEEEEECCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCC GSTIKPFVVAAALDAGTIKTDQIIKTNPGRMRIGGKIVRDGRNYGDLSLSGVLVHSSNVG CCCCCHHHEEEECCCCCCCCCCEEECCCCCEEECCEEEECCCCCCCEEEEEEEEECCCCC MTKIALSMPVQELLGAYQTMGLGNYSGINLEGESAGLIHDRRRWSEFERATLSFGYGLMA HHHHHHHCCHHHHHHHHHHCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHCCCHHH TPLQLARMYATLGNKGVQYPVSILKLKQAPQGTQVISPQVAQDVMEMLVGVTEKGGTARK HHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEE AHIEGYPVAGKTGTARKAVAGGYGEDYVAIFAGVAPVHTPKLAITVVINEPKGDRYYGGD EECCCCCCCCCCCCCHHHHCCCCCCCHHHHHCCCCCCCCCCEEEEEEEECCCCCCCCCCC VAAPVFAAVMSGALQMLNVEPISKREKVRLAANSRSVE HHHHHHHHHHHHHHHHCCCCCCCCCHHEEEECCCCCCC >Mature Secondary Structure SKQAKRKQKPQLIQWRLYVVVAFVCLLFTSLVGRAAYIQIIEPEMLRHQSDMRTLRTTS CCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECHHHHHHHHHHHHHHHHH REVQRGLITDRNGEMLAVSVPVKAVYADPKVIHDEDGFADMRRWQALADVLHEPKEDILK HHHHHCCCCCCCCCEEEEECCEEEEECCCCEEECCCCHHHHHHHHHHHHHHHCCHHHHHH RVQSNPRKRFTYLKRQVTPAVANYIQQLDLPGVYLKPESRRYYPTGEITAQLVGITNIDD HHHCCHHHHHHHHHHHHCHHHHHHHHHCCCCCEEECCCCCCCCCCCCCEEEEEEECCCCC KGIEGLENTYDDWLTGTPSKQKVRKSRDGHVVERLDMVQEGESPNDLVLSIDQRIQQLAY CCCCHHHHHHHHHCCCCCCHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHH RELKKATEINQATSGSIVVLDVLTGEVLAMANTPSYNPNSRENLQSYRMRNRALTDAYEP HHHHHHHHHCCCCCCCEEEEEECCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCC GSTIKPFVVAAALDAGTIKTDQIIKTNPGRMRIGGKIVRDGRNYGDLSLSGVLVHSSNVG CCCCCHHHEEEECCCCCCCCCCEEECCCCCEEECCEEEECCCCCCCEEEEEEEEECCCCC MTKIALSMPVQELLGAYQTMGLGNYSGINLEGESAGLIHDRRRWSEFERATLSFGYGLMA HHHHHHHCCHHHHHHHHHHCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHCCCHHH TPLQLARMYATLGNKGVQYPVSILKLKQAPQGTQVISPQVAQDVMEMLVGVTEKGGTARK HHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEE AHIEGYPVAGKTGTARKAVAGGYGEDYVAIFAGVAPVHTPKLAITVVINEPKGDRYYGGD EECCCCCCCCCCCCCHHHHCCCCCCCHHHHHCCCCCCCCCCEEEEEEEECCCCCCCCCCC VAAPVFAAVMSGALQMLNVEPISKREKVRLAANSRSVE HHHHHHHHHHHHHHHHCCCCCCCCCHHEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]