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The map label for this gene is 167622290

Identifier: 167622290

GI number: 167622290

Start: 412844

End: 413854

Strand: Direct

Name: 167622290

Synonym: Shal_0349

Alternate gene names: NA

Gene position: 412844-413854 (Clockwise)

Preceding gene: 167622285

Following gene: 167622295

Centisome position: 7.9

GC content: 49.26

Gene sequence:

>1011_bases
ATGAAGATATTCATGCTGTTAATCAGTTTTTGTTGTTTTGGCGTTTCGGCGATGGAATGGAATATTCAAAGCCTAGCTCC
CGGTTCTTCATTTAGAGGTAGCGCCGTACTCGAGGGAGTCGCTTGGGTAACGGGGACTGATAACCGCGTCTATATCTCCA
AAGACAGCGGTAACAGCTGGTTAGATGTATCGGTTAAAGATCAGCCTTTGACTGATTTTCGCGATATTGAAGTGTTCGAT
GCTAACACGGCAATTGTTATGGGGGCGGGTCAGGGGGGACTCTCTAAGCTGTATATAACGCAGAACCAAGGATTGAGTTG
GCAGTTGCTGTTCGATAATCCCGATGAACTGGGCTTCTTTAATTCAATCGCTTTTTGGGATCGCAATAATGGTTTGTTGC
TGGGCGATCCCGTTGGTGGTTGTTACGTTATCTTACGCACTGCAGATGGTGGCAAAACATGGCAGCGTATCGCCAAAGGG
GAGTTACCAGAAATGCTCGATAAAGAGGTCGCTTTTGCCGCCAGCGGTAATACATTAATCGTTGGCAAAAGGGGGCGGGC
TTGGTTTACCACCGGCGGCTATAGCAGCTCTGCCTACAGCAGCGCCGACTCGGGGCAACATTGGCGTCGGCGTCCAATCT
CTCTCTATGATGATACTCAAACCGCAGGTGGCTATGCGCTAGCATTTAATCATTTAGGTGATCTATTTGTGGTGGGCGGG
GATTATCAGCAACGGGATAAGTATGATGCGAATATGGTCTATAGAAGGGGCTATGTATGGCATAAAGCGCCGGGTACGAC
ACCTGGCCTACGCACGGCCATGGTGTGCTATGAAGAAACCTGTATTGCCACAGGCAAACTTTCGAGTGATATTTCCCGTG
ACCACGGTTATAGCTGGCAACCACTGCTAATCAATGGTCAGGCTCAGGGCTTCTTCACCCTAGCGATTGACGGTAATACT
TTGGTGGCAGGGGGCCATGGTGGTCGAGTCGCCGTGTATACTTTTGAATAG

Upstream 100 bases:

>100_bases
AATGCTTCTCTAAAGGATAAGGGGGGATGAAGGGCTTGCTTAACGACGAGGTTTATTCGATAGTAACCACATTGAGCTGT
CATTCATTTTAGGGAAATTA

Downstream 100 bases:

>100_bases
TCGCTCCTGATTAGCAAAAGCCCAAATAAGCATTTTGTCCTATAATCGATGGGCTTTTGTTGGGGGGCTAGCCCAAAATA
AGATACATAATAAGAGCACC

Product: BNR repeat-containing glycosyl hydrolase

Products: NA

Alternate protein names: BNR Repeat-Containing Glycosyl Hydrolase; Photosystem II Stability/Assembly Protein; Photosystem II Stability/Assembly Factor-Like Protein; Glycosyl Hydrolase; BNR Repeat-Containing Protein; LOW QUALITY PROTEIN Oxidoreductase

Number of amino acids: Translated: 336; Mature: 336

Protein sequence:

>336_residues
MKIFMLLISFCCFGVSAMEWNIQSLAPGSSFRGSAVLEGVAWVTGTDNRVYISKDSGNSWLDVSVKDQPLTDFRDIEVFD
ANTAIVMGAGQGGLSKLYITQNQGLSWQLLFDNPDELGFFNSIAFWDRNNGLLLGDPVGGCYVILRTADGGKTWQRIAKG
ELPEMLDKEVAFAASGNTLIVGKRGRAWFTTGGYSSSAYSSADSGQHWRRRPISLYDDTQTAGGYALAFNHLGDLFVVGG
DYQQRDKYDANMVYRRGYVWHKAPGTTPGLRTAMVCYEETCIATGKLSSDISRDHGYSWQPLLINGQAQGFFTLAIDGNT
LVAGGHGGRVAVYTFE

Sequences:

>Translated_336_residues
MKIFMLLISFCCFGVSAMEWNIQSLAPGSSFRGSAVLEGVAWVTGTDNRVYISKDSGNSWLDVSVKDQPLTDFRDIEVFD
ANTAIVMGAGQGGLSKLYITQNQGLSWQLLFDNPDELGFFNSIAFWDRNNGLLLGDPVGGCYVILRTADGGKTWQRIAKG
ELPEMLDKEVAFAASGNTLIVGKRGRAWFTTGGYSSSAYSSADSGQHWRRRPISLYDDTQTAGGYALAFNHLGDLFVVGG
DYQQRDKYDANMVYRRGYVWHKAPGTTPGLRTAMVCYEETCIATGKLSSDISRDHGYSWQPLLINGQAQGFFTLAIDGNT
LVAGGHGGRVAVYTFE
>Mature_336_residues
MKIFMLLISFCCFGVSAMEWNIQSLAPGSSFRGSAVLEGVAWVTGTDNRVYISKDSGNSWLDVSVKDQPLTDFRDIEVFD
ANTAIVMGAGQGGLSKLYITQNQGLSWQLLFDNPDELGFFNSIAFWDRNNGLLLGDPVGGCYVILRTADGGKTWQRIAKG
ELPEMLDKEVAFAASGNTLIVGKRGRAWFTTGGYSSSAYSSADSGQHWRRRPISLYDDTQTAGGYALAFNHLGDLFVVGG
DYQQRDKYDANMVYRRGYVWHKAPGTTPGLRTAMVCYEETCIATGKLSSDISRDHGYSWQPLLINGQAQGFFTLAIDGNT
LVAGGHGGRVAVYTFE

Specific function: Unknown

COG id: COG4447

COG function: function code R; Uncharacterized protein related to plant photosystem II stability/assembly factor

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36744; Mature: 36744

Theoretical pI: Translated: 5.67; Mature: 5.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIFMLLISFCCFGVSAMEWNIQSLAPGSSFRGSAVLEGVAWVTGTDNRVYISKDSGNSW
CCHHHHHHHHHHCCCEEEEECHHHCCCCCCCCCCEEEEEEEEEECCCCEEEEEECCCCCE
LDVSVKDQPLTDFRDIEVFDANTAIVMGAGQGGLSKLYITQNQGLSWQLLFDNPDELGFF
EEEEECCCCCCCCCEEEEEECCEEEEEECCCCCCEEEEEEECCCCEEEEEECCCCCCCCC
NSIAFWDRNNGLLLGDPVGGCYVILRTADGGKTWQRIAKGELPEMLDKEVAFAASGNTLI
CEEEEEECCCCEEEECCCCCEEEEEEECCCCHHHHHHHCCCCHHHHCCCEEEEECCCEEE
VGKRGRAWFTTGGYSSSAYSSADSGQHWRRRPISLYDDTQTAGGYALAFNHLGDLFVVGG
EECCCCEEEEECCCCCCCCCCCCCCCHHHCCCCEEECCCCCCCCEEEEECCCCCEEEECC
DYQQRDKYDANMVYRRGYVWHKAPGTTPGLRTAMVCYEETCIATGKLSSDISRDHGYSWQ
CCHHCCCCCCCEEEECCEEEECCCCCCCCHHEEEEEEECCEEECCCCCCCCHHCCCCCCC
PLLINGQAQGFFTLAIDGNTLVAGGHGGRVAVYTFE
EEEEECCCCEEEEEEECCCEEEECCCCCEEEEEEEC
>Mature Secondary Structure
MKIFMLLISFCCFGVSAMEWNIQSLAPGSSFRGSAVLEGVAWVTGTDNRVYISKDSGNSW
CCHHHHHHHHHHCCCEEEEECHHHCCCCCCCCCCEEEEEEEEEECCCCEEEEEECCCCCE
LDVSVKDQPLTDFRDIEVFDANTAIVMGAGQGGLSKLYITQNQGLSWQLLFDNPDELGFF
EEEEECCCCCCCCCEEEEEECCEEEEEECCCCCCEEEEEEECCCCEEEEEECCCCCCCCC
NSIAFWDRNNGLLLGDPVGGCYVILRTADGGKTWQRIAKGELPEMLDKEVAFAASGNTLI
CEEEEEECCCCEEEECCCCCEEEEEEECCCCHHHHHHHCCCCHHHHCCCEEEEECCCEEE
VGKRGRAWFTTGGYSSSAYSSADSGQHWRRRPISLYDDTQTAGGYALAFNHLGDLFVVGG
EECCCCEEEEECCCCCCCCCCCCCCCHHHCCCCEEECCCCCCCCEEEEECCCCCEEEECC
DYQQRDKYDANMVYRRGYVWHKAPGTTPGLRTAMVCYEETCIATGKLSSDISRDHGYSWQ
CCHHCCCCCCCEEEECCEEEECCCCCCCCHHEEEEEEECCEEECCCCCCCCHHCCCCCCC
PLLINGQAQGFFTLAIDGNTLVAGGHGGRVAVYTFE
EEEEECCCCEEEEEEECCCEEEECCCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA