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The map label for this gene is lprI [H]

Identifier: 167622285

GI number: 167622285

Start: 408544

End: 409194

Strand: Direct

Name: lprI [H]

Synonym: Shal_0344

Alternate gene names: 167622285

Gene position: 408544-409194 (Clockwise)

Preceding gene: 167622281

Following gene: 167622290

Centisome position: 7.82

GC content: 47.77

Gene sequence:

>651_bases
ATGCAAAAAACTATTTTACTGGGCTGCTTAGTTCTGTTGGCTGCTTGTAGTTCGACGGTGGCAACTCAAATAAAACCAAC
GCAAGCTGACAGCGAGCTCGTTGTACCCGTTAGCGATATGCATGTTGCTCCAACTTTTGATTGCGCTAAGGCTCAGGGGC
AGGTTGAAACACTCATCTGTCATGACGCTGAACTTGCGCAGCTCGATAGACTGATGGAGCAGATTTATAAAGCGGCTGTC
GTTAATATCCCAGCGTCAGAGCAACCTAAGGCGACGCAGAGAGGTTGGATTAAAGGCCGTAATGACTGCTGGAAGGCGCA
AGATGTGCGTGAGTGTACACTGCAAAACTATAAGGGGCGGATTATCGAGTTGCAGATCCAAGGCGGCTTATTGGAGGTGC
CGCCAGCCGTGGTATTTGATTGTGGTCATCATCCACAGATAACCGCTGTTTTTTATACCCAATTAGACCCAGTAACGGCG
GTATTTACCTTTTCGAGTGAGAAAATGGGTGAACAGCAACTGCAGGCAACCAATGTGCGCAGTGGCAGCGGCGCAAAATA
TCAAGGACGTAACTTTGAGTTTTGGGAGCATCAAGGCGAAGCAAGCGTGCAGTTCTTTGATGACAGCTATCGGTGTAAAT
TACATAAGTAA

Upstream 100 bases:

>100_bases
GGTAAATTAGCTTGGTTAGAATATTAACTATTGTAGAGTTAGATCAATTTGAGTGCGGTTAGAGAGACGCTAGCTGCAGA
GAGTAAGTAAAGGATAAGAG

Downstream 100 bases:

>100_bases
ACGGGGTTCTAGGTTGAACTAGCAAGCTTATAATCGCGATTAGCAAACAAAAAAAGCAGCTTGTCGGCTGCTTTTTGTTT
GCTGTCGTCTTGGGCTTAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 216; Mature: 216

Protein sequence:

>216_residues
MQKTILLGCLVLLAACSSTVATQIKPTQADSELVVPVSDMHVAPTFDCAKAQGQVETLICHDAELAQLDRLMEQIYKAAV
VNIPASEQPKATQRGWIKGRNDCWKAQDVRECTLQNYKGRIIELQIQGGLLEVPPAVVFDCGHHPQITAVFYTQLDPVTA
VFTFSSEKMGEQQLQATNVRSGSGAKYQGRNFEFWEHQGEASVQFFDDSYRCKLHK

Sequences:

>Translated_216_residues
MQKTILLGCLVLLAACSSTVATQIKPTQADSELVVPVSDMHVAPTFDCAKAQGQVETLICHDAELAQLDRLMEQIYKAAV
VNIPASEQPKATQRGWIKGRNDCWKAQDVRECTLQNYKGRIIELQIQGGLLEVPPAVVFDCGHHPQITAVFYTQLDPVTA
VFTFSSEKMGEQQLQATNVRSGSGAKYQGRNFEFWEHQGEASVQFFDDSYRCKLHK
>Mature_216_residues
MQKTILLGCLVLLAACSSTVATQIKPTQADSELVVPVSDMHVAPTFDCAKAQGQVETLICHDAELAQLDRLMEQIYKAAV
VNIPASEQPKATQRGWIKGRNDCWKAQDVRECTLQNYKGRIIELQIQGGLLEVPPAVVFDCGHHPQITAVFYTQLDPVTA
VFTFSSEKMGEQQLQATNVRSGSGAKYQGRNFEFWEHQGEASVQFFDDSYRCKLHK

Specific function: Unknown

COG id: COG4461

COG function: function code S; Uncharacterized protein conserved in bacteria, putative lipoprotein

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018660
- InterPro:   IPR009739 [H]

Pfam domain/function: PF07007 DUF1311; PF09864 DUF2091 [H]

EC number: NA

Molecular weight: Translated: 24033; Mature: 24033

Theoretical pI: Translated: 6.23; Mature: 6.23

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.7 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKTILLGCLVLLAACSSTVATQIKPTQADSELVVPVSDMHVAPTFDCAKAQGQVETLIC
CCHHHHHHHHHHHHHHCHHHHHEECCCCCCCEEEEEECCCEECCCCHHHHCCCCEEEEEE
HDAELAQLDRLMEQIYKAAVVNIPASEQPKATQRGWIKGRNDCWKAQDVRECTLQNYKGR
CCHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCC
IIELQIQGGLLEVPPAVVFDCGHHPQITAVFYTQLDPVTAVFTFSSEKMGEQQLQATNVR
EEEEEECCCEEECCCEEEEECCCCCEEEEEEEEECCCEEEEEEECCHHHCHHHHHHHCCC
SGSGAKYQGRNFEFWEHQGEASVQFFDDSYRCKLHK
CCCCCCCCCCCCCCEECCCCEEEEEECCCEEEEECC
>Mature Secondary Structure
MQKTILLGCLVLLAACSSTVATQIKPTQADSELVVPVSDMHVAPTFDCAKAQGQVETLIC
CCHHHHHHHHHHHHHHCHHHHHEECCCCCCCEEEEEECCCEECCCCHHHHCCCCEEEEEE
HDAELAQLDRLMEQIYKAAVVNIPASEQPKATQRGWIKGRNDCWKAQDVRECTLQNYKGR
CCHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCC
IIELQIQGGLLEVPPAVVFDCGHHPQITAVFYTQLDPVTAVFTFSSEKMGEQQLQATNVR
EEEEEECCCEEECCCEEEEECCCCCEEEEEEEEECCCEEEEEEECCHHHCHHHHHHHCCC
SGSGAKYQGRNFEFWEHQGEASVQFFDDSYRCKLHK
CCCCCCCCCCCCCCEECCCCEEEEEECCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]