The gene/protein map for NC_010334 is currently unavailable.
Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is spy [C]

Identifier: 167622280

GI number: 167622280

Start: 403532

End: 404014

Strand: Direct

Name: spy [C]

Synonym: Shal_0339

Alternate gene names: 167622280

Gene position: 403532-404014 (Clockwise)

Preceding gene: 167622277

Following gene: 167622281

Centisome position: 7.72

GC content: 43.69

Gene sequence:

>483_bases
ATGATGAAAAAGAATAATTTAAAAGCAGGTTTGCTTGCCATAGTGGCCAGCACAGTATTATTAACAGCGGGTGTTAGCGC
CGCTAATGACTACCATGGTTCACGTGATGGTAAGCAAGGTCATCATCAGATGAAAGGTGGATGTGGCAGTCATCACGATC
TGCGTAAGATGTTTCACGGTTTAGATCTAAGCGATGAGCAGAAGACTGAGATGAAAGCGCTATTTAGTGCTCATCGTGAC
GAGATGAAACAAAACCGTCCGTCTAAAGAAGCGCGGGCTGCACAAAAACAGCAGATGTTAGGTTTTATTACGTCACCTAA
CTTTAACGAAGCTGAAGTGAAACAGGCACTAGTGGCTAAGCAAGAAGCTCGTCAGCAAAAGGCTGTGGGTATTATTAAGC
TACAAAACCAAGCGTATCAGTTGCTGACCCCTGAGCAGCAAGAGAAATTTAAGCAGCGCTTTGCTAAGCATCATAAAAGG
TAA

Upstream 100 bases:

>100_bases
GTGTTTTACGCTACCTAAACCCTAGCTTACGTTGAGTAGTCTAAACTGGTAAGCGTCAAATCAAGCTTAGCGGGGCTAAG
TAAATTTAATAGAGGCTACC

Downstream 100 bases:

>100_bases
TCAGCTTTCGCTTTGAAGGCTAATCGACCCAATAGCTTTTATCTATTGGGTCAATTGGTTTTAACTTGAAGGAAATCATC
AGTTTTTCTCTCTCGTTTGT

Product: hypothetical protein

Products: NA

Alternate protein names: Spheroplast Protein Y; Periplasmic Protein

Number of amino acids: Translated: 160; Mature: 160

Protein sequence:

>160_residues
MMKKNNLKAGLLAIVASTVLLTAGVSAANDYHGSRDGKQGHHQMKGGCGSHHDLRKMFHGLDLSDEQKTEMKALFSAHRD
EMKQNRPSKEARAAQKQQMLGFITSPNFNEAEVKQALVAKQEARQQKAVGIIKLQNQAYQLLTPEQQEKFKQRFAKHHKR

Sequences:

>Translated_160_residues
MMKKNNLKAGLLAIVASTVLLTAGVSAANDYHGSRDGKQGHHQMKGGCGSHHDLRKMFHGLDLSDEQKTEMKALFSAHRD
EMKQNRPSKEARAAQKQQMLGFITSPNFNEAEVKQALVAKQEARQQKAVGIIKLQNQAYQLLTPEQQEKFKQRFAKHHKR
>Mature_160_residues
MMKKNNLKAGLLAIVASTVLLTAGVSAANDYHGSRDGKQGHHQMKGGCGSHHDLRKMFHGLDLSDEQKTEMKALFSAHRD
EMKQNRPSKEARAAQKQQMLGFITSPNFNEAEVKQALVAKQEARQQKAVGIIKLQNQAYQLLTPEQQEKFKQRFAKHHKR

Specific function: Could Be Involved In Zinc Resistance Or Another Aspect Of Zinc Metabolism. [C]

COG id: COG3678

COG function: function code UNTP; P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788039, Length=116, Percent_Identity=34.4827586206897, Blast_Score=64, Evalue=6e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18030; Mature: 18030

Theoretical pI: Translated: 10.69; Mature: 10.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKKNNLKAGLLAIVASTVLLTAGVSAANDYHGSRDGKQGHHQMKGGCGSHHDLRKMFHG
CCCCCCHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCHHHHHCCCCCCHHHHHHHHHC
LDLSDEQKTEMKALFSAHRDEMKQNRPSKEARAAQKQQMLGFITSPNFNEAEVKQALVAK
CCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
QEARQQKAVGIIKLQNQAYQLLTPEQQEKFKQRFAKHHKR
HHHHHHHHHHHHEECCCHHHHCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MMKKNNLKAGLLAIVASTVLLTAGVSAANDYHGSRDGKQGHHQMKGGCGSHHDLRKMFHG
CCCCCCHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCHHHHHCCCCCCHHHHHHHHHC
LDLSDEQKTEMKALFSAHRDEMKQNRPSKEARAAQKQQMLGFITSPNFNEAEVKQALVAK
CCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
QEARQQKAVGIIKLQNQAYQLLTPEQQEKFKQRFAKHHKR
HHHHHHHHHHHHEECCCHHHHCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA