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The map label for this gene is araB [H]

Identifier: 167622202

GI number: 167622202

Start: 311970

End: 313604

Strand: Reverse

Name: araB [H]

Synonym: Shal_0261

Alternate gene names: 167622202

Gene position: 313604-311970 (Counterclockwise)

Preceding gene: 167622203

Following gene: 167622201

Centisome position: 6.0

GC content: 50.15

Gene sequence:

>1635_bases
ATGAGCAGTTATTTTATCGGTGTAGATGTGGGTAGCGGCAGTGCCCGCGCTGGCGTATTTGACAGCCAAGGCCGTAAGGC
TGGCGAGGCCAAACGCGATATCAGTATTTTTAAACCTAAGGCGCATTTTGTTGAGCAATCTTCCGATGATATTTGGCAGT
GTGTGTGTTTGGCGGTGCGTGATGCTATGTCTCAGGCCAATATTGACTCGGTTCAAGTCAAAGGTATTGGCTTTGATGCA
ACCTGCTCCATGGTGGTTCTGGATAAGCATGGCTTACCGTTAACCGTCAGCCCAACGGGGCGCAGTGAGCAAAATATTGT
GATGTGGATGGATCATCGCGCCATTGCTCAGGCCGAGCGCATCAATGCCAGCAAACATCCTGTGCTAGCCTTTGTGGGTA
ACCATATCTCTCCCGAGATGCAAACACCTAAATTACTGTGGCTGAAAGAAAATATGCCTTCTACCTGGGCAAAGGCGGGT
TACTTCTTCGATCTACCAGACTTTCTCACCTGGAAGGCAACCAATGAAAACAGCCGCTCTTTGTGCTCTACCGTGTGCAA
GTGGACCTATCTGGGTCACGAAAGTAAATGGGATAAAGATTACTTTAACACCATAGGGTTAGGCGAACTGCTGCAAGATG
ACGCTCGCATTATTGGTAGCGATATTCGTCCCATGGGCGAGGCTATCGGCAATGGTCTAACGGCGCAGGCCGCAGCCGAG
CTAGGACTACTGACAGGCACTAAGGTGGCGACCTCGATTATCGATGCCCATGCTGGCGGGATTGGCATATTAGGTGCGGC
TGGAATGAGCGGTGAGGCGGCAGATTTTAATAAGCGATTGGCCTTGATTGGTGGTACATCGACTTGCCATATGGCGGTAT
CAAAGACCGCTCGCTTTATCGACGGCATCTGGGGCGCATATTATAGCGCAATGATCCCTGGTCTCTGGCTTAATGAAGGC
GGCCAATCTGCAACAGGTGTGCTGATTGATCATATTATTAATGCCCATCCTTATAATGCACAGGCCGTTGAGCAAGCTAA
AGCGGCTGGGATCACCATCTATCAGCTATTAAACGATCGGTTACTCAATCTTGCCGGAAGCAAGGAAGATATCGCCTTCT
TGACTCGTGATCGCCATGTGCTGCCCTATTTTAATGGTAACCGCTCCCCAAGGGCCAACCCGCATTTAACCGGCACCATG
ACAGGCTTGAGTATGGGCGTCACCTTGGATGATATGGCGCTGCAATATTTAGCCACAGTGCAAGCCATTGCCTTGGGAAC
ACGACATATTATCGAAGAGATGAACAAGTCAGGTTATGCCATCGACACCATCATGGCTTGTGGCGGTGGTACTAAGAATC
CAGTCTTTATTCAAGAGCATGCCAATGCCACAGGGTGCGCCATGTTGCTGTCAGAAGAGAGCGAAGCCGTATTATTAGGT
TCTGCTATGTTAGGCGCTGTCGCAGGGGGGGGCTTTGACTCTATTCCGGATGCGATGAATGCCATGAGCCGCATCGGTAA
AACGGTGACGCCAACGGCCGATAAGAGCAAGCGCTTTTATGATGCGAAGTACCAGGTATTTCAGCAGATGTATGAGGATG
ATTGTCGCTACAAGGCGATGATGGCAGCGGTATAA

Upstream 100 bases:

>100_bases
TGAACTTACTTGGGGTGAGCAGTTATCTCACTATGGCGCTGTGGGGCGGCATTCTCATTGTTTTCATTGCCCTACAAAAG
TACAAATCATAGGAGCGAAT

Downstream 100 bases:

>100_bases
TACCAACCAGTATAAAGATTTGATCGCTCAGCGAGAGTTTAGCGGCTCTGAGGCAAGGCTGCGAGTGAAGAGCATAGTTA
TTCTACGTTTAAGCTCCCTC

Product: FGGY-family pentulose kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 544; Mature: 543

Protein sequence:

>544_residues
MSSYFIGVDVGSGSARAGVFDSQGRKAGEAKRDISIFKPKAHFVEQSSDDIWQCVCLAVRDAMSQANIDSVQVKGIGFDA
TCSMVVLDKHGLPLTVSPTGRSEQNIVMWMDHRAIAQAERINASKHPVLAFVGNHISPEMQTPKLLWLKENMPSTWAKAG
YFFDLPDFLTWKATNENSRSLCSTVCKWTYLGHESKWDKDYFNTIGLGELLQDDARIIGSDIRPMGEAIGNGLTAQAAAE
LGLLTGTKVATSIIDAHAGGIGILGAAGMSGEAADFNKRLALIGGTSTCHMAVSKTARFIDGIWGAYYSAMIPGLWLNEG
GQSATGVLIDHIINAHPYNAQAVEQAKAAGITIYQLLNDRLLNLAGSKEDIAFLTRDRHVLPYFNGNRSPRANPHLTGTM
TGLSMGVTLDDMALQYLATVQAIALGTRHIIEEMNKSGYAIDTIMACGGGTKNPVFIQEHANATGCAMLLSEESEAVLLG
SAMLGAVAGGGFDSIPDAMNAMSRIGKTVTPTADKSKRFYDAKYQVFQQMYEDDCRYKAMMAAV

Sequences:

>Translated_544_residues
MSSYFIGVDVGSGSARAGVFDSQGRKAGEAKRDISIFKPKAHFVEQSSDDIWQCVCLAVRDAMSQANIDSVQVKGIGFDA
TCSMVVLDKHGLPLTVSPTGRSEQNIVMWMDHRAIAQAERINASKHPVLAFVGNHISPEMQTPKLLWLKENMPSTWAKAG
YFFDLPDFLTWKATNENSRSLCSTVCKWTYLGHESKWDKDYFNTIGLGELLQDDARIIGSDIRPMGEAIGNGLTAQAAAE
LGLLTGTKVATSIIDAHAGGIGILGAAGMSGEAADFNKRLALIGGTSTCHMAVSKTARFIDGIWGAYYSAMIPGLWLNEG
GQSATGVLIDHIINAHPYNAQAVEQAKAAGITIYQLLNDRLLNLAGSKEDIAFLTRDRHVLPYFNGNRSPRANPHLTGTM
TGLSMGVTLDDMALQYLATVQAIALGTRHIIEEMNKSGYAIDTIMACGGGTKNPVFIQEHANATGCAMLLSEESEAVLLG
SAMLGAVAGGGFDSIPDAMNAMSRIGKTVTPTADKSKRFYDAKYQVFQQMYEDDCRYKAMMAAV
>Mature_543_residues
SSYFIGVDVGSGSARAGVFDSQGRKAGEAKRDISIFKPKAHFVEQSSDDIWQCVCLAVRDAMSQANIDSVQVKGIGFDAT
CSMVVLDKHGLPLTVSPTGRSEQNIVMWMDHRAIAQAERINASKHPVLAFVGNHISPEMQTPKLLWLKENMPSTWAKAGY
FFDLPDFLTWKATNENSRSLCSTVCKWTYLGHESKWDKDYFNTIGLGELLQDDARIIGSDIRPMGEAIGNGLTAQAAAEL
GLLTGTKVATSIIDAHAGGIGILGAAGMSGEAADFNKRLALIGGTSTCHMAVSKTARFIDGIWGAYYSAMIPGLWLNEGG
QSATGVLIDHIINAHPYNAQAVEQAKAAGITIYQLLNDRLLNLAGSKEDIAFLTRDRHVLPYFNGNRSPRANPHLTGTMT
GLSMGVTLDDMALQYLATVQAIALGTRHIIEEMNKSGYAIDTIMACGGGTKNPVFIQEHANATGCAMLLSEESEAVLLGS
AMLGAVAGGGFDSIPDAMNAMSRIGKTVTPTADKSKRFYDAKYQVFQQMYEDDCRYKAMMAAV

Specific function: L-lyxose utilization. [C]

COG id: COG1069

COG function: function code C; Ribulose kinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribulokinase family [H]

Homologues:

Organism=Homo sapiens, GI164663828, Length=543, Percent_Identity=50.4604051565378, Blast_Score=548, Evalue=1e-156,
Organism=Homo sapiens, GI164663830, Length=567, Percent_Identity=48.3245149911817, Blast_Score=535, Evalue=1e-152,
Organism=Escherichia coli, GI1790005, Length=542, Percent_Identity=23.2472324723247, Blast_Score=103, Evalue=2e-23,
Organism=Escherichia coli, GI1786249, Length=577, Percent_Identity=25.8232235701906, Blast_Score=99, Evalue=6e-22,
Organism=Escherichia coli, GI1787789, Length=546, Percent_Identity=21.7948717948718, Blast_Score=67, Evalue=2e-12,
Organism=Saccharomyces cerevisiae, GI6320314, Length=561, Percent_Identity=37.6114081996435, Blast_Score=375, Evalue=1e-104,
Organism=Saccharomyces cerevisiae, GI6324080, Length=471, Percent_Identity=24.6284501061571, Blast_Score=131, Evalue=3e-31,
Organism=Drosophila melanogaster, GI24657106, Length=549, Percent_Identity=46.8123861566485, Blast_Score=488, Evalue=1e-138,
Organism=Drosophila melanogaster, GI24657102, Length=549, Percent_Identity=46.8123861566485, Blast_Score=488, Evalue=1e-138,
Organism=Drosophila melanogaster, GI21356323, Length=438, Percent_Identity=46.1187214611872, Blast_Score=379, Evalue=1e-105,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000577
- InterPro:   IPR018485
- InterPro:   IPR018484
- InterPro:   IPR005929 [H]

Pfam domain/function: PF02782 FGGY_C; PF00370 FGGY_N [H]

EC number: =2.7.1.16 [H]

Molecular weight: Translated: 58561; Mature: 58430

Theoretical pI: Translated: 6.39; Mature: 6.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSYFIGVDVGSGSARAGVFDSQGRKAGEAKRDISIFKPKAHFVEQSSDDIWQCVCLAVR
CCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEECCHHHHHCCCCCHHHHHHHHHHH
DAMSQANIDSVQVKGIGFDATCSMVVLDKHGLPLTVSPTGRSEQNIVMWMDHRAIAQAER
HHHHHCCCCEEEEEECCCCCEEEEEEEECCCCEEEECCCCCCCCCEEEEECCHHHHHHHH
INASKHPVLAFVGNHISPEMQTPKLLWLKENMPSTWAKAGYFFDLPDFLTWKATNENSRS
CCCCCCCEEEEECCCCCCCCCCCEEEEEECCCCCHHHHCCEEEECCCCEEEEECCCCHHH
LCSTVCKWTYLGHESKWDKDYFNTIGLGELLQDDARIIGSDIRPMGEAIGNGLTAQAAAE
HHHHHHHHHCCCCCCCCCHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHH
LGLLTGTKVATSIIDAHAGGIGILGAAGMSGEAADFNKRLALIGGTSTCHMAVSKTARFI
HHCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHH
DGIWGAYYSAMIPGLWLNEGGQSATGVLIDHIINAHPYNAQAVEQAKAAGITIYQLLNDR
HHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHH
LLNLAGSKEDIAFLTRDRHVLPYFNGNRSPRANPHLTGTMTGLSMGVTLDDMALQYLATV
HHHCCCCCCCEEEEECCCEEEEEECCCCCCCCCCCEEEEECCEEECCCHHHHHHHHHHHH
QAIALGTRHIIEEMNKSGYAIDTIMACGGGTKNPVFIQEHANATGCAMLLSEESEAVLLG
HHHHHHHHHHHHHHCCCCCEEEHHEECCCCCCCCEEEEECCCCCEEEEEECCCCCEEEEH
SAMLGAVAGGGFDSIPDAMNAMSRIGKTVTPTADKSKRFYDAKYQVFQQMYEDDCRYKAM
HHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
MAAV
HHCC
>Mature Secondary Structure 
SSYFIGVDVGSGSARAGVFDSQGRKAGEAKRDISIFKPKAHFVEQSSDDIWQCVCLAVR
CCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEECCHHHHHCCCCCHHHHHHHHHHH
DAMSQANIDSVQVKGIGFDATCSMVVLDKHGLPLTVSPTGRSEQNIVMWMDHRAIAQAER
HHHHHCCCCEEEEEECCCCCEEEEEEEECCCCEEEECCCCCCCCCEEEEECCHHHHHHHH
INASKHPVLAFVGNHISPEMQTPKLLWLKENMPSTWAKAGYFFDLPDFLTWKATNENSRS
CCCCCCCEEEEECCCCCCCCCCCEEEEEECCCCCHHHHCCEEEECCCCEEEEECCCCHHH
LCSTVCKWTYLGHESKWDKDYFNTIGLGELLQDDARIIGSDIRPMGEAIGNGLTAQAAAE
HHHHHHHHHCCCCCCCCCHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHH
LGLLTGTKVATSIIDAHAGGIGILGAAGMSGEAADFNKRLALIGGTSTCHMAVSKTARFI
HHCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHH
DGIWGAYYSAMIPGLWLNEGGQSATGVLIDHIINAHPYNAQAVEQAKAAGITIYQLLNDR
HHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHH
LLNLAGSKEDIAFLTRDRHVLPYFNGNRSPRANPHLTGTMTGLSMGVTLDDMALQYLATV
HHHCCCCCCCEEEEECCCEEEEEECCCCCCCCCCCEEEEECCEEECCCHHHHHHHHHHHH
QAIALGTRHIIEEMNKSGYAIDTIMACGGGTKNPVFIQEHANATGCAMLLSEESEAVLLG
HHHHHHHHHHHHHHCCCCCEEEHHEECCCCCCCCEEEEECCCCCEEEEEECCCCCEEEEH
SAMLGAVAGGGFDSIPDAMNAMSRIGKTVTPTADKSKRFYDAKYQVFQQMYEDDCRYKAM
HHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
MAAV
HHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA