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The map label for this gene is ctaA [H]

Identifier: 167622193

GI number: 167622193

Start: 302268

End: 303251

Strand: Reverse

Name: ctaA [H]

Synonym: Shal_0252

Alternate gene names: 167622193

Gene position: 303251-302268 (Counterclockwise)

Preceding gene: 167622194

Following gene: 167622192

Centisome position: 5.8

GC content: 48.98

Gene sequence:

>984_bases
ATGCAGATTAAGCCGCTATTGAAAATCACTCTGGTTTTTACTTTGTGCGTAATATTAATGGGTGCTTACACTCGCCTATC
CGATGCAGGCCTTGGCTGCCCTGACTGGCCTGGCTGCTACGGCATGCTCAAAGTCCCTAGCCAAGCCCATGAACTAAACC
AAGTACAACAAGCCTTTCCTGAACATACCGTTGAAGCCGATAAAGCTTGGCTTGAGATGATCCATCGTTACATTGCTGGG
ACATTAGGCTTATTGGTGTTACTCATTTTAGCCATCAGCCTTAAGACTAATGATGCTCCTAAGAAACTGCCAATGTTCAT
CGCTGCCCTTATCATCTTTCAAGCGGCTCTCGGCATGTGGACTGTGACGATGAAGCTGATGCCGATTATCGTCATGGCCC
ACCTACTGGGCGGATTTGCACTATTCTCACTGCTGTTATTACTGTATCTGCGCAGCAAGCCGCTTAGGATCCCTGGCGGT
GATCTGCCAGCTCGTAAACTAGCAGGCTTCGCAGCCATCAGCATTGGCGTACTTCTACTGCAAATCATCTTAGGTGGCTG
GACATCATCAAACTATGCCGCGCTGGCCTGCACCACCTTGCCATTTTGCGAGGGCAACTGGGTCGATAACCTCAGCTTTG
CTAAAGCCTTTTCGCCGTTTCAAGGCGAACATGCCAGCTTTGAGTATGGGGTTTTAGACTATTCAGCCAGAATGACTATT
CATGTCGCCCACCGCGTAGGCGCCATCATCACCACAGCGATGTTGCTGTATTTGGCTTTTAAGCTCATTCACACGGCAAA
ATCCACCACGATACGCAATGCCGCTTGGCTGCTAGCCGTATTGGTCGTGGTTCAAGTGATACTTGGGATCTCAAATATAG
TGCTACACCTTCCCCTAGGTATCGCCGTTTCCCATAATGGCGGCGCAGCGCTATTACTACTGACATTAGTCTTTATTAAT
TACGCCCTATGGCGCAAAGCATAG

Upstream 100 bases:

>100_bases
GCTGCAGATCATCAATCACAAATCATGCAAGGCAAAGCCTTAGTGGCCGATCTGCGTAAGTTACTCAAACTGTCACGGAT
TGGCTAAGGAGACGTTTGTT

Downstream 100 bases:

>100_bases
CGAGGTTTAACTTATGCCAAAACCCATCGCACTCTCAAGAAACCCATCAACACCACTGTTTCAATGGCGTGCTTATTACG
AAATGACTAAGCCTAAGGTC

Product: cytochrome oxidase assembly

Products: NA

Alternate protein names: HAS; Cytochrome aa3-controlling protein [H]

Number of amino acids: Translated: 327; Mature: 327

Protein sequence:

>327_residues
MQIKPLLKITLVFTLCVILMGAYTRLSDAGLGCPDWPGCYGMLKVPSQAHELNQVQQAFPEHTVEADKAWLEMIHRYIAG
TLGLLVLLILAISLKTNDAPKKLPMFIAALIIFQAALGMWTVTMKLMPIIVMAHLLGGFALFSLLLLLYLRSKPLRIPGG
DLPARKLAGFAAISIGVLLLQIILGGWTSSNYAALACTTLPFCEGNWVDNLSFAKAFSPFQGEHASFEYGVLDYSARMTI
HVAHRVGAIITTAMLLYLAFKLIHTAKSTTIRNAAWLLAVLVVVQVILGISNIVLHLPLGIAVSHNGGAALLLLTLVFIN
YALWRKA

Sequences:

>Translated_327_residues
MQIKPLLKITLVFTLCVILMGAYTRLSDAGLGCPDWPGCYGMLKVPSQAHELNQVQQAFPEHTVEADKAWLEMIHRYIAG
TLGLLVLLILAISLKTNDAPKKLPMFIAALIIFQAALGMWTVTMKLMPIIVMAHLLGGFALFSLLLLLYLRSKPLRIPGG
DLPARKLAGFAAISIGVLLLQIILGGWTSSNYAALACTTLPFCEGNWVDNLSFAKAFSPFQGEHASFEYGVLDYSARMTI
HVAHRVGAIITTAMLLYLAFKLIHTAKSTTIRNAAWLLAVLVVVQVILGISNIVLHLPLGIAVSHNGGAALLLLTLVFIN
YALWRKA
>Mature_327_residues
MQIKPLLKITLVFTLCVILMGAYTRLSDAGLGCPDWPGCYGMLKVPSQAHELNQVQQAFPEHTVEADKAWLEMIHRYIAG
TLGLLVLLILAISLKTNDAPKKLPMFIAALIIFQAALGMWTVTMKLMPIIVMAHLLGGFALFSLLLLLYLRSKPLRIPGG
DLPARKLAGFAAISIGVLLLQIILGGWTSSNYAALACTTLPFCEGNWVDNLSFAKAFSPFQGEHASFEYGVLDYSARMTI
HVAHRVGAIITTAMLLYLAFKLIHTAKSTTIRNAAWLLAVLVVVQVILGISNIVLHLPLGIAVSHNGGAALLLLTLVFIN
YALWRKA

Specific function: Catalyzes the oxidation of the C8 methyl side group on heme O porphyrin ring into a formyl group [H]

COG id: COG1612

COG function: function code O; Uncharacterized protein required for cytochrome oxidase assembly

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the COX15/CtaA family. Type 2 subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003780 [H]

Pfam domain/function: PF02628 COX15-CtaA [H]

EC number: NA

Molecular weight: Translated: 35598; Mature: 35598

Theoretical pI: Translated: 9.67; Mature: 9.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQIKPLLKITLVFTLCVILMGAYTRLSDAGLGCPDWPGCYGMLKVPSQAHELNQVQQAFP
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCHHHHHHHHHHHHCC
EHTVEADKAWLEMIHRYIAGTLGLLVLLILAISLKTNDAPKKLPMFIAALIIFQAALGMW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
TVTMKLMPIIVMAHLLGGFALFSLLLLLYLRSKPLRIPGGDLPARKLAGFAAISIGVLLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
QIILGGWTSSNYAALACTTLPFCEGNWVDNLSFAKAFSPFQGEHASFEYGVLDYSARMTI
HHHHCCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHCCCCCCCCCCEEECEEEECCCEEE
HVAHRVGAIITTAMLLYLAFKLIHTAKSTTIRNAAWLLAVLVVVQVILGISNIVLHLPLG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
IAVSHNGGAALLLLTLVFINYALWRKA
EEEECCCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MQIKPLLKITLVFTLCVILMGAYTRLSDAGLGCPDWPGCYGMLKVPSQAHELNQVQQAFP
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCHHHHHHHHHHHHCC
EHTVEADKAWLEMIHRYIAGTLGLLVLLILAISLKTNDAPKKLPMFIAALIIFQAALGMW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
TVTMKLMPIIVMAHLLGGFALFSLLLLLYLRSKPLRIPGGDLPARKLAGFAAISIGVLLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
QIILGGWTSSNYAALACTTLPFCEGNWVDNLSFAKAFSPFQGEHASFEYGVLDYSARMTI
HHHHCCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHCCCCCCCCCCEEECEEEECCCEEE
HVAHRVGAIITTAMLLYLAFKLIHTAKSTTIRNAAWLLAVLVVVQVILGISNIVLHLPLG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
IAVSHNGGAALLLLTLVFINYALWRKA
EEEECCCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11743194; 11743193 [H]