| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is 167622172
Identifier: 167622172
GI number: 167622172
Start: 277569
End: 279329
Strand: Reverse
Name: 167622172
Synonym: Shal_0231
Alternate gene names: NA
Gene position: 279329-277569 (Counterclockwise)
Preceding gene: 167622173
Following gene: 167622171
Centisome position: 5.34
GC content: 43.5
Gene sequence:
>1761_bases ATGAAACTTAATAAAATAATGTCAGCGATTTTAACAGCCTCGGTGCTTACTTGCTCGGCAATTTCATTATCAGTAAATGC TGCGGGAAATTTACCAGGTACTTCATCTTCCGCTGTTGCTCAAGGACAATTAGGCTTTGTCTACGTTGACCCTTATGACT TTAGTCCATTGGTTGCAGTGATTGATTTGGGAGGTAAAACGATTACAAACGCCACGGTTTCCGTCAAAGGTAAAGACCGT AAAGGCATTGATATTGATTATCCCGTCAGTACTACTCAGTTGAATACACATAACGGGATTCCGGTGTTTGGTCTCTACCC TGACCACCTTAATGAAGTTGAAGTCTCCTACAAGCTTGATGGTAAAAAAATTAAAGAGACATATAAGATCCGTACCAATG ATATACCACATCAACATATTGATGGTCAGGATAGAACTCAGTATGAATATGAACCGATTAAAGTTGCTAAGGGGTTTGAA GATAGATTTTATCTAGTCGATGGCCAAGTCATCACACCCGATCTGCGTGATAAGTGGGATTGGAAACCAACCCAGAATAT TATTGATACCAACGGTGATGTACGCTGGCACTTAAGTGCCGATGTAATTTATGACCGTCCAGGCGGGTCCATGTCATTTA AACAAACCCGTGACGGTAAGCTTATCTTCGGTCAGGGCCTGATGTTTAATCAACATAATGGCTTCCTGTCACCTTACTAT GCCAAGTACGACTTTATCGGCAAACCAATTTTCAAACGTGATCTTCCTCGCGGCTATATCGGTTTCTCTCATGAAGTGAC TGAAATGCCAAACGGCAACCTGTTGCTACGTGTGGGCAAAAAAGACTATATCACTCCAACAGGGATAAAAGTTGACTCTA TTCGTGACCATGTAATTGAAGTTAATAACAATGGCGAAGTCGTTAAGGTATGGGACTTCAATAAGATCCTAGATCCATTA CGTGATGATGTATTGAGTTCATTGGATATGGGCGCAGTGTGTCTAAACGTAGATGTAGCCTCTGCGGGTAAGACAATGTC AGCAGAAGAGCTAGCAAATGAGCCTTATGGCGACGTTGCCGGTGTAGATACAGGTCGCAACTGGTTACATATCAACTCTA TTGGTTATGACGCAGAAGACGACAGCATCATCATCAGTTCTCGTCATCAATCAGCAGTGATTAAGATTGGCCGTGACGAT GAAGTGAAGTGGATCCTTGGTACCCCTATCGGCTGGGAAGGAGATCTAGCAGATAAGGTACTCATCCCGGTTGATAAAAA GGGCAAAAAGTTAAAGTGTGATGCCAAAGATTGTGAAGGTGACTTTGACTGGACATGGACTCAGCATACCGCTTGGCCTG TACCTGAACGTGGCACAGTTACAGTCTTCGACAATGGCGATGGACGCTCTCTTGAGCAGCCAGCTCTACCGACAATGAAG TACTCTCGTGGTGTTGAATACAAGGTCGATATGGACAATATGACGGTTCAACAGACCTGGGAATACGGTAAAGACCGCGG CTATGAGTGGTACAGCCCAATTACCTCTATTACTGAATTCCAGCCAGATCATAACACCATGTTTATGGCATCAGCTTCAG CAGGTCTGCTAGAAAGTGATAAGGCTCCGGAGCATTGGATTACAGAGGTTGATCCAAAAACCAATGAAGTAAAAGTTGAA ATCAAGGTTAAAACCCTGACTAAACACGAGCCGGGTTACCGCTCAACAGTAGTTCACCCAGAAGCCATGTTTAACCAGTA A
Upstream 100 bases:
>100_bases GTGTCAGTTATCGTTACGCAGAAAATAACTTAGGTAAAAAAGGCTATCACGATGCATTTTTTTACTCAGTCCAATATAAA TTCTAATAAAGGGATTAACT
Downstream 100 bases:
>100_bases TAAACCAATGGCAGCGCCTTTTAAAAGGCGCTGACAGCTGTTAACCCTATTTTTAATGGAACTCACTCATGAAAAAAACA CTTTCCGCCATCGCAGCAAC
Product: arylsulfotransferase
Products: NA
Alternate protein names: Arylsulfate Sulfotransferase; Outer Membrane Protein; Fructose-Bisphosphate Aldolase; Arylsulfate Sulfotransferase Degenerate; Sulfatase; Arylsulfatase
Number of amino acids: Translated: 586; Mature: 586
Protein sequence:
>586_residues MKLNKIMSAILTASVLTCSAISLSVNAAGNLPGTSSSAVAQGQLGFVYVDPYDFSPLVAVIDLGGKTITNATVSVKGKDR KGIDIDYPVSTTQLNTHNGIPVFGLYPDHLNEVEVSYKLDGKKIKETYKIRTNDIPHQHIDGQDRTQYEYEPIKVAKGFE DRFYLVDGQVITPDLRDKWDWKPTQNIIDTNGDVRWHLSADVIYDRPGGSMSFKQTRDGKLIFGQGLMFNQHNGFLSPYY AKYDFIGKPIFKRDLPRGYIGFSHEVTEMPNGNLLLRVGKKDYITPTGIKVDSIRDHVIEVNNNGEVVKVWDFNKILDPL RDDVLSSLDMGAVCLNVDVASAGKTMSAEELANEPYGDVAGVDTGRNWLHINSIGYDAEDDSIIISSRHQSAVIKIGRDD EVKWILGTPIGWEGDLADKVLIPVDKKGKKLKCDAKDCEGDFDWTWTQHTAWPVPERGTVTVFDNGDGRSLEQPALPTMK YSRGVEYKVDMDNMTVQQTWEYGKDRGYEWYSPITSITEFQPDHNTMFMASASAGLLESDKAPEHWITEVDPKTNEVKVE IKVKTLTKHEPGYRSTVVHPEAMFNQ
Sequences:
>Translated_586_residues MKLNKIMSAILTASVLTCSAISLSVNAAGNLPGTSSSAVAQGQLGFVYVDPYDFSPLVAVIDLGGKTITNATVSVKGKDR KGIDIDYPVSTTQLNTHNGIPVFGLYPDHLNEVEVSYKLDGKKIKETYKIRTNDIPHQHIDGQDRTQYEYEPIKVAKGFE DRFYLVDGQVITPDLRDKWDWKPTQNIIDTNGDVRWHLSADVIYDRPGGSMSFKQTRDGKLIFGQGLMFNQHNGFLSPYY AKYDFIGKPIFKRDLPRGYIGFSHEVTEMPNGNLLLRVGKKDYITPTGIKVDSIRDHVIEVNNNGEVVKVWDFNKILDPL RDDVLSSLDMGAVCLNVDVASAGKTMSAEELANEPYGDVAGVDTGRNWLHINSIGYDAEDDSIIISSRHQSAVIKIGRDD EVKWILGTPIGWEGDLADKVLIPVDKKGKKLKCDAKDCEGDFDWTWTQHTAWPVPERGTVTVFDNGDGRSLEQPALPTMK YSRGVEYKVDMDNMTVQQTWEYGKDRGYEWYSPITSITEFQPDHNTMFMASASAGLLESDKAPEHWITEVDPKTNEVKVE IKVKTLTKHEPGYRSTVVHPEAMFNQ >Mature_586_residues MKLNKIMSAILTASVLTCSAISLSVNAAGNLPGTSSSAVAQGQLGFVYVDPYDFSPLVAVIDLGGKTITNATVSVKGKDR KGIDIDYPVSTTQLNTHNGIPVFGLYPDHLNEVEVSYKLDGKKIKETYKIRTNDIPHQHIDGQDRTQYEYEPIKVAKGFE DRFYLVDGQVITPDLRDKWDWKPTQNIIDTNGDVRWHLSADVIYDRPGGSMSFKQTRDGKLIFGQGLMFNQHNGFLSPYY AKYDFIGKPIFKRDLPRGYIGFSHEVTEMPNGNLLLRVGKKDYITPTGIKVDSIRDHVIEVNNNGEVVKVWDFNKILDPL RDDVLSSLDMGAVCLNVDVASAGKTMSAEELANEPYGDVAGVDTGRNWLHINSIGYDAEDDSIIISSRHQSAVIKIGRDD EVKWILGTPIGWEGDLADKVLIPVDKKGKKLKCDAKDCEGDFDWTWTQHTAWPVPERGTVTVFDNGDGRSLEQPALPTMK YSRGVEYKVDMDNMTVQQTWEYGKDRGYEWYSPITSITEFQPDHNTMFMASASAGLLESDKAPEHWITEVDPKTNEVKVE IKVKTLTKHEPGYRSTVVHPEAMFNQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 65600; Mature: 65600
Theoretical pI: Translated: 5.21; Mature: 5.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLNKIMSAILTASVLTCSAISLSVNAAGNLPGTSSSAVAQGQLGFVYVDPYDFSPLVAV CCHHHHHHHHHHHHHHEEEEEEEEEECCCCCCCCCCCCEECCCEEEEEECCCCCCCEEEE IDLGGKTITNATVSVKGKDRKGIDIDYPVSTTQLNTHNGIPVFGLYPDHLNEVEVSYKLD EECCCCEEECEEEEEECCCCCCCEEECCCCEEEEECCCCCEEEEECCCCCCEEEEEEEEC GKKIKETYKIRTNDIPHQHIDGQDRTQYEYEPIKVAKGFEDRFYLVDGQVITPDLRDKWD CCEECEEEEEECCCCCCCCCCCCCCCEEEECCEEEECCCCCEEEEECCEEECCCCCCCCC WKPTQNIIDTNGDVRWHLSADVIYDRPGGSMSFKQTRDGKLIFGQGLMFNQHNGFLSPYY CCCCCCEECCCCCEEEEEEEEEEEECCCCCCCCCCCCCCCEEEECCEEEECCCCCCCCCE AKYDFIGKPIFKRDLPRGYIGFSHEVTEMPNGNLLLRVGKKDYITPTGIKVDSIRDHVIE EEEECCCCCHHHHCCCCCEECCCCEEEECCCCCEEEEECCCCCCCCCCEEECCCCCEEEE VNNNGEVVKVWDFNKILDPLRDDVLSSLDMGAVCLNVDVASAGKTMSAEELANEPYGDVA ECCCCCEEEEECCHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCHHHHCCCCCCCCC GVDTGRNWLHINSIGYDAEDDSIIISSRHQSAVIKIGRDDEVKWILGTPIGWEGDLADKV CCCCCCCEEEEEECCCCCCCCEEEEECCCCEEEEEECCCCCEEEEEECCCCCCCCCCCEE LIPVDKKGKKLKCDAKDCEGDFDWTWTQHTAWPVPERGTVTVFDNGDGRSLEQPALPTMK EEEECCCCCEEECCHHCCCCCCCEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCH YSRGVEYKVDMDNMTVQQTWEYGKDRGYEWYSPITSITEFQPDHNTMFMASASAGLLESD HHCCCEEEEECCCCCHHHHHHHHCCCCCCHHCCHHHHHHCCCCCCEEEEEECCCCCCCCC KAPEHWITEVDPKTNEVKVEIKVKTLTKHEPGYRSTVVHPEAMFNQ CCCCCCCEECCCCCCEEEEEEEEEEEECCCCCCCCEEECHHHHCCC >Mature Secondary Structure MKLNKIMSAILTASVLTCSAISLSVNAAGNLPGTSSSAVAQGQLGFVYVDPYDFSPLVAV CCHHHHHHHHHHHHHHEEEEEEEEEECCCCCCCCCCCCEECCCEEEEEECCCCCCCEEEE IDLGGKTITNATVSVKGKDRKGIDIDYPVSTTQLNTHNGIPVFGLYPDHLNEVEVSYKLD EECCCCEEECEEEEEECCCCCCCEEECCCCEEEEECCCCCEEEEECCCCCCEEEEEEEEC GKKIKETYKIRTNDIPHQHIDGQDRTQYEYEPIKVAKGFEDRFYLVDGQVITPDLRDKWD CCEECEEEEEECCCCCCCCCCCCCCCEEEECCEEEECCCCCEEEEECCEEECCCCCCCCC WKPTQNIIDTNGDVRWHLSADVIYDRPGGSMSFKQTRDGKLIFGQGLMFNQHNGFLSPYY CCCCCCEECCCCCEEEEEEEEEEEECCCCCCCCCCCCCCCEEEECCEEEECCCCCCCCCE AKYDFIGKPIFKRDLPRGYIGFSHEVTEMPNGNLLLRVGKKDYITPTGIKVDSIRDHVIE EEEECCCCCHHHHCCCCCEECCCCEEEECCCCCEEEEECCCCCCCCCCEEECCCCCEEEE VNNNGEVVKVWDFNKILDPLRDDVLSSLDMGAVCLNVDVASAGKTMSAEELANEPYGDVA ECCCCCEEEEECCHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCHHHHCCCCCCCCC GVDTGRNWLHINSIGYDAEDDSIIISSRHQSAVIKIGRDDEVKWILGTPIGWEGDLADKV CCCCCCCEEEEEECCCCCCCCEEEEECCCCEEEEEECCCCCEEEEEECCCCCCCCCCCEE LIPVDKKGKKLKCDAKDCEGDFDWTWTQHTAWPVPERGTVTVFDNGDGRSLEQPALPTMK EEEECCCCCEEECCHHCCCCCCCEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCH YSRGVEYKVDMDNMTVQQTWEYGKDRGYEWYSPITSITEFQPDHNTMFMASASAGLLESD HHCCCEEEEECCCCCHHHHHHHHCCCCCCHHCCHHHHHHCCCCCCEEEEEECCCCCCCCC KAPEHWITEVDPKTNEVKVEIKVKTLTKHEPGYRSTVVHPEAMFNQ CCCCCCCEECCCCCCEEEEEEEEEEEECCCCCCCCEEECHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA