| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is 167622166
Identifier: 167622166
GI number: 167622166
Start: 272273
End: 273124
Strand: Direct
Name: 167622166
Synonym: Shal_0225
Alternate gene names: NA
Gene position: 272273-273124 (Clockwise)
Preceding gene: 167622165
Following gene: 167622167
Centisome position: 5.21
GC content: 48.12
Gene sequence:
>852_bases ATGGCGTTGAAATTAGAGATGCAAGGGCAAACCTACGGCCCATTCGTTAATGAGTATACCGCTAGAGATGTGATGCTGTT CGCGCTGGGTTGTGGTGCTGGCAGTGACGGTAAAACTGATCTCGATTATGTGTATGAGAAGCAATTAAAGGTACTGCCTA TCTTTGCTGCGACGCAAATTGTCGATGCAGAGGTGACTAAGACTATCGATTATGGCTTTAATTGGGGCGGATCTTTGCAT TGGGGTTTTGACCTGCATATTCATCAGCCACTGCCTACTAATCCTGGCAAATTGAGCACCAAGGTGTTGTTGAAGGGGCT GTTCGACCGAGGGGAAGGACGCGGTTGTTTGGCGCAACACATAGGTGAAACCTTCGATGAGACGGGGACTAAACTGTTTA CTAACGAGAGTTGGGATTGCGCGTTATACGATGGCGGCTTTGGCGGCCCAAAAGCGCCAGCAGATATTGTTGAGATCCCA GAGCGCGCGCCAGATTTCGAAATTGAACAAGATATTCCACTAAACCAAGCGCTTATCTACCGACTATCGGGCGATGACCA TCCTCAGCATGTGGATTGGGAATATGCGCAAGAGTTTGGTCACCCAAAACCGAATCTGCACGGTGTTAGCACTGCAGGTG TGGCCTGTCGTCACATCATTCAGGCGATGTTTCCCGGTGAACCGGAGCGATTAACACGCTTTAAGACTCGGCTAACTAAA TCCTTGTATCCCGGCGCAAGGGTCAAAACCCAAATTTGGAAGTGGGATGATAACTGTGTCCATTTCAGAGTGATGGATGC CAACGATCCTGACACTTTTTATCTTAACTTTGGTTTAGTTGAGTGGAAGTAA
Upstream 100 bases:
>100_bases TAGATAGGTTTCAGTGCTATCAATCGAAATAGAGCCTGATATTTCCCATGAGATATCGGGTTTTATTTTAACTGTTTGTC GGTAATGGAAGGATTCACCA
Downstream 100 bases:
>100_bases GCCTTTGTAGGAGGCTTTAGCCTCCTATCTAGACGAGAAATAGCATTTATCAACGTTAGTATTTAGCTGTGACGTCTTAA TGTTTGAGGCGCAACAGCTA
Product: 3-alpha,7-alpha, 12-alpha-trihydroxy-5-beta-cholest-24-enoyl-CoAhydratase
Products: NA
Alternate protein names: MaoC-Like Dehydratase; Dehydratase; Dehydrogenase; Acyl Dehydratase; UfaA2 Protein; MaoC-Like Domain-Containing; Enoyl-CoA Hydratase; Short-Chain Dehydrogenase/Reductase SDR; MaoC Family Protein; Hydratase; -Specific Enoyl-CoA Hydratase; 2-Enoyl Acyl-CoA Hydratase; MaoC Acyl Dehydratase; MaoC Family Dehydratase; Multifunctional; Enoyl-CoA Hydratase/3-Hydroxyacyl-CoA Dehydratase; MaoC Like Dehydratase/Enoyl-CoA Hydratase; MaoC-Like-Specific Enoyl-CoA Hydratase; MaoC-Like Domain-Containing Protein; MaoC Family Dehydrogenase/Dehydratase; MaoC Like Domain Protein
Number of amino acids: Translated: 283; Mature: 282
Protein sequence:
>283_residues MALKLEMQGQTYGPFVNEYTARDVMLFALGCGAGSDGKTDLDYVYEKQLKVLPIFAATQIVDAEVTKTIDYGFNWGGSLH WGFDLHIHQPLPTNPGKLSTKVLLKGLFDRGEGRGCLAQHIGETFDETGTKLFTNESWDCALYDGGFGGPKAPADIVEIP ERAPDFEIEQDIPLNQALIYRLSGDDHPQHVDWEYAQEFGHPKPNLHGVSTAGVACRHIIQAMFPGEPERLTRFKTRLTK SLYPGARVKTQIWKWDDNCVHFRVMDANDPDTFYLNFGLVEWK
Sequences:
>Translated_283_residues MALKLEMQGQTYGPFVNEYTARDVMLFALGCGAGSDGKTDLDYVYEKQLKVLPIFAATQIVDAEVTKTIDYGFNWGGSLH WGFDLHIHQPLPTNPGKLSTKVLLKGLFDRGEGRGCLAQHIGETFDETGTKLFTNESWDCALYDGGFGGPKAPADIVEIP ERAPDFEIEQDIPLNQALIYRLSGDDHPQHVDWEYAQEFGHPKPNLHGVSTAGVACRHIIQAMFPGEPERLTRFKTRLTK SLYPGARVKTQIWKWDDNCVHFRVMDANDPDTFYLNFGLVEWK >Mature_282_residues ALKLEMQGQTYGPFVNEYTARDVMLFALGCGAGSDGKTDLDYVYEKQLKVLPIFAATQIVDAEVTKTIDYGFNWGGSLHW GFDLHIHQPLPTNPGKLSTKVLLKGLFDRGEGRGCLAQHIGETFDETGTKLFTNESWDCALYDGGFGGPKAPADIVEIPE RAPDFEIEQDIPLNQALIYRLSGDDHPQHVDWEYAQEFGHPKPNLHGVSTAGVACRHIIQAMFPGEPERLTRFKTRLTKS LYPGARVKTQIWKWDDNCVHFRVMDANDPDTFYLNFGLVEWK
Specific function: Unknown
COG id: COG2030
COG function: function code I; Acyl dehydratase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI4504505, Length=278, Percent_Identity=30.2158273381295, Blast_Score=128, Evalue=4e-30, Organism=Caenorhabditis elegans, GI17532783, Length=246, Percent_Identity=34.5528455284553, Blast_Score=122, Evalue=3e-28, Organism=Saccharomyces cerevisiae, GI6322861, Length=268, Percent_Identity=30.9701492537313, Blast_Score=95, Evalue=1e-20, Organism=Drosophila melanogaster, GI18859837, Length=261, Percent_Identity=29.1187739463602, Blast_Score=107, Evalue=7e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31840; Mature: 31709
Theoretical pI: Translated: 5.18; Mature: 5.18
Prosite motif: PS00639 THIOL_PROTEASE_HIS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALKLEMQGQTYGPFVNEYTARDVMLFALGCGAGSDGKTDLDYVYEKQLKVLPIFAATQI CEEEEEECCCCCCCCHHHHHHHEEEEEEEECCCCCCCCCCHHHHHHCCCEEEEEEHHHHH VDAEVTKTIDYGFNWGGSLHWGFDLHIHQPLPTNPGKLSTKVLLKGLFDRGEGRGCLAQH HHHHHHHEEECCCCCCCEEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHH IGETFDETGTKLFTNESWDCALYDGGFGGPKAPADIVEIPERAPDFEIEQDIPLNQALIY HHHHHHHCCCEEEECCCCCEEEEECCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCEEEEE RLSGDDHPQHVDWEYAQEFGHPKPNLHGVSTAGVACRHIIQAMFPGEPERLTRFKTRLTK EECCCCCCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH SLYPGARVKTQIWKWDDNCVHFRVMDANDPDTFYLNFGLVEWK HHCCCCCEEEEEEEECCCEEEEEEEECCCCCEEEEEEEEEEEC >Mature Secondary Structure ALKLEMQGQTYGPFVNEYTARDVMLFALGCGAGSDGKTDLDYVYEKQLKVLPIFAATQI EEEEEECCCCCCCCHHHHHHHEEEEEEEECCCCCCCCCCHHHHHHCCCEEEEEEHHHHH VDAEVTKTIDYGFNWGGSLHWGFDLHIHQPLPTNPGKLSTKVLLKGLFDRGEGRGCLAQH HHHHHHHEEECCCCCCCEEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHH IGETFDETGTKLFTNESWDCALYDGGFGGPKAPADIVEIPERAPDFEIEQDIPLNQALIY HHHHHHHCCCEEEECCCCCEEEEECCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCEEEEE RLSGDDHPQHVDWEYAQEFGHPKPNLHGVSTAGVACRHIIQAMFPGEPERLTRFKTRLTK EECCCCCCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH SLYPGARVKTQIWKWDDNCVHFRVMDANDPDTFYLNFGLVEWK HHCCCCCEEEEEEEECCCEEEEEEEECCCCCEEEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA