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The map label for this gene is 167622151

Identifier: 167622151

GI number: 167622151

Start: 251182

End: 252417

Strand: Reverse

Name: 167622151

Synonym: Shal_0210

Alternate gene names: NA

Gene position: 252417-251182 (Counterclockwise)

Preceding gene: 167622152

Following gene: 167622150

Centisome position: 4.83

GC content: 46.68

Gene sequence:

>1236_bases
GTGCAGCTCACTCCTAAGTTAAGCTTAAATGTGGCCCAGCAACATCTATTTGATGCTGAAGACTCGTCACGTATTGAACT
CAGCTATGCCGAGACCGCAGTGCTGCAACTCATGCTCAAGCATCAGGCCACCCTTATCACTCGCGAAGCCTTACTCGAAG
CGGGCTGGCACGACAGAGTCGTTTCCCCATCGTCTTTACAGCAATGCATCAGCGTACTGAGAAAGAAGCTAGCAAACTAT
CCAGAGATCGAGCTAAAAACCATTCCACGCCACGGCTATATTCTGCATTTATCAACCACAGAAAAGCCCAAGAAAATCAC
AGCCAAAAATAAGGCTGCCGGGCTGTTTTCCATTGCGGTTTTCGCCTGTTTATTACTGATGGCTTATGGTTACGCTACCC
ATAATCAACCGCCTTACAGTGAAACCCAAATAGATAGCCAGTTAAGCCAAGTTAAGGGCGAGATGACGCTATTCTCTCCT
AGGCAAAATGAGACGATTTCGGCCTCTAAAGCCAATAAAAGACTTAGCAATCAGATAGGTAACGAGTTAGATTGGCGAGC
CCCTTTCAAGACCTTTAGCAGTTTTGGCCTACTCACAGATAAAATGGACAACTTTGCTATCTGCCCAGATTACCAAGATA
AAATCTGTAGCGGTAAGCAGCTCATTAACATCAGTAGCGAAAAAGACCATGGCAGTAAGCTTGCTCTCTCTAACTTTCTG
ACCACCAAGATTAGAATGGAGCAGAAAACCTATAACAAGCTGGATCTGCCTGAGCTTAGAAAACATCAGGGAGAGTTAAA
GGAGCAGATCTATCATGGCGATCTGTACTTCTCTATTGATGATCACCGCCTCGTACGCAGCGATATCCGTATCTCACTAG
TGGATCTAGCACCAGACAGTGGCATCTTCTATTTTGCCGCCTGCATTACCGATGAGGACTGCTATACCACACCTATTCGC
TACGAGATCCGTGGTCAGTTCAAACGCACTACACAGAAGTGGCAGCAGCGTAAGGTGGAGCGCTTCGATATCGAGGTCAG
CAAGACGACACTCTCTTCTCCTGATGCGCTATCGGATACCGCGCAAATTATCTATCTTGCCCTTAGAAAGCAGCACCTAA
CTCAAGCAGGGGTGAGTTTTTACCGCGTCTATCAAGACGATGGCACGGCAGTTTGGCAGTTACCCATGGTTAATCAGAAC
ATGATGTGGATGCAGCGACAGACACTCAAATTATGA

Upstream 100 bases:

>100_bases
TGCAAATCTGGAAGTGGCTCAAAGTTTACGGGCTAAAATTTCCATCGCTTTAAACCTAAGAATATACTGAATTAGATTTC
CATTTTGTTAGAGAATTTTT

Downstream 100 bases:

>100_bases
TCCCTTGCCTGAGTTGTTATATAATCTAGTCTCTGTTCCTTTAGGCTAAAAACTCAATGTTAAGTTATCGTCACGGCTAC
CACGCTGGCAATTATGCCGA

Product: transcriptional regulator CadC

Products: NA

Alternate protein names: Transcriptional Regulator

Number of amino acids: Translated: 411; Mature: 411

Protein sequence:

>411_residues
MQLTPKLSLNVAQQHLFDAEDSSRIELSYAETAVLQLMLKHQATLITREALLEAGWHDRVVSPSSLQQCISVLRKKLANY
PEIELKTIPRHGYILHLSTTEKPKKITAKNKAAGLFSIAVFACLLLMAYGYATHNQPPYSETQIDSQLSQVKGEMTLFSP
RQNETISASKANKRLSNQIGNELDWRAPFKTFSSFGLLTDKMDNFAICPDYQDKICSGKQLINISSEKDHGSKLALSNFL
TTKIRMEQKTYNKLDLPELRKHQGELKEQIYHGDLYFSIDDHRLVRSDIRISLVDLAPDSGIFYFAACITDEDCYTTPIR
YEIRGQFKRTTQKWQQRKVERFDIEVSKTTLSSPDALSDTAQIIYLALRKQHLTQAGVSFYRVYQDDGTAVWQLPMVNQN
MMWMQRQTLKL

Sequences:

>Translated_411_residues
MQLTPKLSLNVAQQHLFDAEDSSRIELSYAETAVLQLMLKHQATLITREALLEAGWHDRVVSPSSLQQCISVLRKKLANY
PEIELKTIPRHGYILHLSTTEKPKKITAKNKAAGLFSIAVFACLLLMAYGYATHNQPPYSETQIDSQLSQVKGEMTLFSP
RQNETISASKANKRLSNQIGNELDWRAPFKTFSSFGLLTDKMDNFAICPDYQDKICSGKQLINISSEKDHGSKLALSNFL
TTKIRMEQKTYNKLDLPELRKHQGELKEQIYHGDLYFSIDDHRLVRSDIRISLVDLAPDSGIFYFAACITDEDCYTTPIR
YEIRGQFKRTTQKWQQRKVERFDIEVSKTTLSSPDALSDTAQIIYLALRKQHLTQAGVSFYRVYQDDGTAVWQLPMVNQN
MMWMQRQTLKL
>Mature_411_residues
MQLTPKLSLNVAQQHLFDAEDSSRIELSYAETAVLQLMLKHQATLITREALLEAGWHDRVVSPSSLQQCISVLRKKLANY
PEIELKTIPRHGYILHLSTTEKPKKITAKNKAAGLFSIAVFACLLLMAYGYATHNQPPYSETQIDSQLSQVKGEMTLFSP
RQNETISASKANKRLSNQIGNELDWRAPFKTFSSFGLLTDKMDNFAICPDYQDKICSGKQLINISSEKDHGSKLALSNFL
TTKIRMEQKTYNKLDLPELRKHQGELKEQIYHGDLYFSIDDHRLVRSDIRISLVDLAPDSGIFYFAACITDEDCYTTPIR
YEIRGQFKRTTQKWQQRKVERFDIEVSKTTLSSPDALSDTAQIIYLALRKQHLTQAGVSFYRVYQDDGTAVWQLPMVNQN
MMWMQRQTLKL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47116; Mature: 47116

Theoretical pI: Translated: 8.86; Mature: 8.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLTPKLSLNVAQQHLFDAEDSSRIELSYAETAVLQLMLKHQATLITREALLEAGWHDRV
CCCCCCCHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
VSPSSLQQCISVLRKKLANYPEIELKTIPRHGYILHLSTTEKPKKITAKNKAAGLFSIAV
CCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEECCCCCCEECCCCCCCHHHHHHH
FACLLLMAYGYATHNQPPYSETQIDSQLSQVKGEMTLFSPRQNETISASKANKRLSNQIG
HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHCC
NELDWRAPFKTFSSFGLLTDKMDNFAICPDYQDKICSGKQLINISSEKDHGSKLALSNFL
CCCCCCCCHHHHHHCCCHHHCCCCEEECCCHHHHHCCCCEEEEECCCCCCCCHHHHHHHH
TTKIRMEQKTYNKLDLPELRKHQGELKEQIYHGDLYFSIDDHRLVRSDIRISLVDLAPDS
HHHEEEHHHHCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCHHHHCCCEEEEEEECCCC
GIFYFAACITDEDCYTTPIRYEIRGQFKRTTQKWQQRKVERFDIEVSKTTLSSPDALSDT
CEEEEEEEECCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCHHHH
AQIIYLALRKQHLTQAGVSFYRVYQDDGTAVWQLPMVNQNMMWMQRQTLKL
HHHHHHHHHHHHHHHHCCEEEEEEECCCCEEEEECCCCCCHHHHHHHHHCC
>Mature Secondary Structure
MQLTPKLSLNVAQQHLFDAEDSSRIELSYAETAVLQLMLKHQATLITREALLEAGWHDRV
CCCCCCCHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
VSPSSLQQCISVLRKKLANYPEIELKTIPRHGYILHLSTTEKPKKITAKNKAAGLFSIAV
CCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEECCCCCCEECCCCCCCHHHHHHH
FACLLLMAYGYATHNQPPYSETQIDSQLSQVKGEMTLFSPRQNETISASKANKRLSNQIG
HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHCC
NELDWRAPFKTFSSFGLLTDKMDNFAICPDYQDKICSGKQLINISSEKDHGSKLALSNFL
CCCCCCCCHHHHHHCCCHHHCCCCEEECCCHHHHHCCCCEEEEECCCCCCCCHHHHHHHH
TTKIRMEQKTYNKLDLPELRKHQGELKEQIYHGDLYFSIDDHRLVRSDIRISLVDLAPDS
HHHEEEHHHHCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCHHHHCCCEEEEEEECCCC
GIFYFAACITDEDCYTTPIRYEIRGQFKRTTQKWQQRKVERFDIEVSKTTLSSPDALSDT
CEEEEEEEECCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCHHHH
AQIIYLALRKQHLTQAGVSFYRVYQDDGTAVWQLPMVNQNMMWMQRQTLKL
HHHHHHHHHHHHHHHHCCEEEEEEECCCCEEEEECCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA