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The map label for this gene is arnT2 [H]

Identifier: 167622080

GI number: 167622080

Start: 152949

End: 154676

Strand: Direct

Name: arnT2 [H]

Synonym: Shal_0139

Alternate gene names: 167622080

Gene position: 152949-154676 (Clockwise)

Preceding gene: 167622079

Following gene: 167622083

Centisome position: 2.93

GC content: 49.54

Gene sequence:

>1728_bases
ATGGTATTGAAATCGCTACAACAACGATTCAATAGTGATGACTATTATCAAGTGCTGAGCATGCTATTGCTGTTCGCCGC
AGTGATTTTGCTTGTCGGCATTGGCTGGCGTTCTCCTTGGCCGGCCGACGAACCTCGTTTTGCCGAAGTGGCCCGAGAGA
TGGTGGATTCTGGTCAATGGTTTTTCCCACAACGCGGAGGCGAGTTCTATCCTGATAAGCCACCCGTGTTTATGTGGGCT
ATCGCGCTATTTTATGGCTTAACGGGCAGCTTAAAAGTCGCTTTTTTATTGCCGAATGCCCTAGCTGGTTTTCTAACGCT
ATTTCTGGTTTATGATCTAGGTTCGAGACTGTGGAGTGTGCGTGTCGGCCGCAATGCCGCCCTACTGTTGATGTTGGCTC
CGCAGTTTTTAATTCAGAGTAAAAATGCGCAGATTGATGCCATGGTGATGTGTTGGATCACCTTGGGCTGCTATGGTTTG
CTGCGACACTTTATGACGGGGCCTCATTGGCGTTGGTATTTCGCGGGCTGGGCGTTTATGGGGCTAGGGGTGATCACCAA
AGGCGTGGGTTTCTTGCCACTGCTGATGCTGCTCCCGATTATCGCTTACGCACTAATCCAAAAAGATCTCTTTAAAGGCC
GCCTTAAATGGTGGTGCCTAGCAGGGCCATTGGCGATGCTGGCAGTGATTGCCTGTTGGCTGGTGCCTATGGTGCTGATT
GTCCAAAGTCAGGGCACACCAGAGCTGATCCAATATCAAAACAACATTCTATTTAAGCAAACGGGTGAGCGTTACGTTAA
TGCTTGGCACCATATCAAGCCTTGGTATTACTTCTTAGTGAGTGTGGTGCCGGTAATGTGGTTCCCGTTGCCGCTGCTGT
TTATTGCTCACTGGCAACGAGTGGTTGCCAAGATCAAAGCTGAGCCTATCATTGCCATATTGCTGGTTTGGGTCGTGCTA
GTGCTGGTTTTCTTTAGCATTAGCCCAGGCAAACGTGGTGTGTATATCTTGCCAGCACTGCCTATGCTCGCATTAGCACT
ATCGGCGATTATTACTGGTGCAGATACCAAGCGCTGGTTTGAATGGGGCCTAACAGGCTTACTCTGGTTGCTCGGATTGG
TATTCACCACAGCTGGTGTTTTAGCGCTTATTCATCACCCCGCTATCGTTAAGGCGATGGCCGATTATTCGGCTGACTTA
ACGCATATGGGCTACCTGCTACTGACGGTGGGTATTATCTGGTTTGCAGTTCTATTGCTGCTGCGCCGTTCACAAGCCAT
GGTGAGAATGGGGATCAGCCTAGCACTAACCTGGATTGTAATGGGCACATGGGGCTACAGCATTTTAGAGCCTATGCGCA
CGCCGCAAGCCCTGATGGCCAATGCGGCTAAGGCGATAGGCCCAGATGGTCAGCTTGGTTTAGTTAAATTTAAAGAGCAG
TTCATATTGTTCTCTCCGGTGGATATTACCCACTTTAGCTACCTTGCACCCCTTGAGCAGCAAGAGCGTAATGCATGGCA
GTGGATGCATGAAGGAGATAAGCGCTTTATCTTAGTCGGCGATCATCAAAAGCTTAACTGCTTTAACTTTACTGGTGCGA
AAAGCATGGGTGTTGCTCACCGTGATGACTGGGTACTGTTAAGCAAAGACAATCTGCTGCCCACCTGTGCCGAGCCTGAT
AAGCGTTATCAGTATTTCACCCCGACACCAGGACGGTGGATGGATTGA

Upstream 100 bases:

>100_bases
AACGCGCTTGCGTAAACAGGTCGATGAGATCGTCACCGATGAATAATAAGATTTAACAACAAGCTTTAACAACTGGCTTT
AACAACAAGGTTTAATAAAA

Downstream 100 bases:

>100_bases
TTTTAGGTCCTAGGTTCTAGGAAAGGCAGGGGCTAGGACCTAGGAAAGGCTAAGACGATACAAGCTGAGACGGTTCAAGC
GAAGACGGAAAAGCATGTTC

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: 4-amino-4-deoxy-L-arabinose lipid A transferase 2; Lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase; Undecaprenyl phosphate-alpha-L-Ara4N transferase 2 [H]

Number of amino acids: Translated: 575; Mature: 575

Protein sequence:

>575_residues
MVLKSLQQRFNSDDYYQVLSMLLLFAAVILLVGIGWRSPWPADEPRFAEVAREMVDSGQWFFPQRGGEFYPDKPPVFMWA
IALFYGLTGSLKVAFLLPNALAGFLTLFLVYDLGSRLWSVRVGRNAALLLMLAPQFLIQSKNAQIDAMVMCWITLGCYGL
LRHFMTGPHWRWYFAGWAFMGLGVITKGVGFLPLLMLLPIIAYALIQKDLFKGRLKWWCLAGPLAMLAVIACWLVPMVLI
VQSQGTPELIQYQNNILFKQTGERYVNAWHHIKPWYYFLVSVVPVMWFPLPLLFIAHWQRVVAKIKAEPIIAILLVWVVL
VLVFFSISPGKRGVYILPALPMLALALSAIITGADTKRWFEWGLTGLLWLLGLVFTTAGVLALIHHPAIVKAMADYSADL
THMGYLLLTVGIIWFAVLLLLRRSQAMVRMGISLALTWIVMGTWGYSILEPMRTPQALMANAAKAIGPDGQLGLVKFKEQ
FILFSPVDITHFSYLAPLEQQERNAWQWMHEGDKRFILVGDHQKLNCFNFTGAKSMGVAHRDDWVLLSKDNLLPTCAEPD
KRYQYFTPTPGRWMD

Sequences:

>Translated_575_residues
MVLKSLQQRFNSDDYYQVLSMLLLFAAVILLVGIGWRSPWPADEPRFAEVAREMVDSGQWFFPQRGGEFYPDKPPVFMWA
IALFYGLTGSLKVAFLLPNALAGFLTLFLVYDLGSRLWSVRVGRNAALLLMLAPQFLIQSKNAQIDAMVMCWITLGCYGL
LRHFMTGPHWRWYFAGWAFMGLGVITKGVGFLPLLMLLPIIAYALIQKDLFKGRLKWWCLAGPLAMLAVIACWLVPMVLI
VQSQGTPELIQYQNNILFKQTGERYVNAWHHIKPWYYFLVSVVPVMWFPLPLLFIAHWQRVVAKIKAEPIIAILLVWVVL
VLVFFSISPGKRGVYILPALPMLALALSAIITGADTKRWFEWGLTGLLWLLGLVFTTAGVLALIHHPAIVKAMADYSADL
THMGYLLLTVGIIWFAVLLLLRRSQAMVRMGISLALTWIVMGTWGYSILEPMRTPQALMANAAKAIGPDGQLGLVKFKEQ
FILFSPVDITHFSYLAPLEQQERNAWQWMHEGDKRFILVGDHQKLNCFNFTGAKSMGVAHRDDWVLLSKDNLLPTCAEPD
KRYQYFTPTPGRWMD
>Mature_575_residues
MVLKSLQQRFNSDDYYQVLSMLLLFAAVILLVGIGWRSPWPADEPRFAEVAREMVDSGQWFFPQRGGEFYPDKPPVFMWA
IALFYGLTGSLKVAFLLPNALAGFLTLFLVYDLGSRLWSVRVGRNAALLLMLAPQFLIQSKNAQIDAMVMCWITLGCYGL
LRHFMTGPHWRWYFAGWAFMGLGVITKGVGFLPLLMLLPIIAYALIQKDLFKGRLKWWCLAGPLAMLAVIACWLVPMVLI
VQSQGTPELIQYQNNILFKQTGERYVNAWHHIKPWYYFLVSVVPVMWFPLPLLFIAHWQRVVAKIKAEPIIAILLVWVVL
VLVFFSISPGKRGVYILPALPMLALALSAIITGADTKRWFEWGLTGLLWLLGLVFTTAGVLALIHHPAIVKAMADYSADL
THMGYLLLTVGIIWFAVLLLLRRSQAMVRMGISLALTWIVMGTWGYSILEPMRTPQALMANAAKAIGPDGQLGLVKFKEQ
FILFSPVDITHFSYLAPLEQQERNAWQWMHEGDKRFILVGDHQKLNCFNFTGAKSMGVAHRDDWVLLSKDNLLPTCAEPD
KRYQYFTPTPGRWMD

Specific function: Catalyzes the transfer of the L-Ara4N moiety of the glycolipid undecaprenyl phosphate-alpha-L-Ara4N to lipid A. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides [H]

COG id: COG1807

COG function: function code M; 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 83 family [H]

Homologues:

Organism=Escherichia coli, GI1788591, Length=343, Percent_Identity=29.7376093294461, Blast_Score=75, Evalue=8e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022839
- InterPro:   IPR003342 [H]

Pfam domain/function: PF02366 PMT [H]

EC number: =2.4.2.43 [H]

Molecular weight: Translated: 65320; Mature: 65320

Theoretical pI: Translated: 9.65; Mature: 9.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVLKSLQQRFNSDDYYQVLSMLLLFAAVILLVGIGWRSPWPADEPRFAEVAREMVDSGQW
CCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCE
FFPQRGGEFYPDKPPVFMWAIALFYGLTGSLKVAFLLPNALAGFLTLFLVYDLGSRLWSV
ECCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHEEE
RVGRNAALLLMLAPQFLIQSKNAQIDAMVMCWITLGCYGLLRHFMTGPHWRWYFAGWAFM
EECCCCEEHHHCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHH
GLGVITKGVGFLPLLMLLPIIAYALIQKDLFKGRLKWWCLAGPLAMLAVIACWLVPMVLI
HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
VQSQGTPELIQYQNNILFKQTGERYVNAWHHIKPWYYFLVSVVPVMWFPLPLLFIAHWQR
HCCCCCHHHHHHHCCEEEECCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
VVAKIKAEPIIAILLVWVVLVLVFFSISPGKRGVYILPALPMLALALSAIITGADTKRWF
HHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEECHHHHHHHHHHHHHCCCCHHHHH
EWGLTGLLWLLGLVFTTAGVLALIHHPAIVKAMADYSADLTHMGYLLLTVGIIWFAVLLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
LRRSQAMVRMGISLALTWIVMGTWGYSILEPMRTPQALMANAAKAIGPDGQLGLVKFKEQ
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHCCCCCCEEHHEECCC
FILFSPVDITHFSYLAPLEQQERNAWQWMHEGDKRFILVGDHQKLNCFNFTGAKSMGVAH
EEEECCCCHHHHHHHCCHHHHHHHHHHHHHCCCCEEEEEECCCEEEEEECCCCCCCCCCC
RDDWVLLSKDNLLPTCAEPDKRYQYFTPTPGRWMD
CCCEEEEECCCCCCCCCCCCCCCEEECCCCCCCCC
>Mature Secondary Structure
MVLKSLQQRFNSDDYYQVLSMLLLFAAVILLVGIGWRSPWPADEPRFAEVAREMVDSGQW
CCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCE
FFPQRGGEFYPDKPPVFMWAIALFYGLTGSLKVAFLLPNALAGFLTLFLVYDLGSRLWSV
ECCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHEEE
RVGRNAALLLMLAPQFLIQSKNAQIDAMVMCWITLGCYGLLRHFMTGPHWRWYFAGWAFM
EECCCCEEHHHCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHH
GLGVITKGVGFLPLLMLLPIIAYALIQKDLFKGRLKWWCLAGPLAMLAVIACWLVPMVLI
HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
VQSQGTPELIQYQNNILFKQTGERYVNAWHHIKPWYYFLVSVVPVMWFPLPLLFIAHWQR
HCCCCCHHHHHHHCCEEEECCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
VVAKIKAEPIIAILLVWVVLVLVFFSISPGKRGVYILPALPMLALALSAIITGADTKRWF
HHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEECHHHHHHHHHHHHHCCCCHHHHH
EWGLTGLLWLLGLVFTTAGVLALIHHPAIVKAMADYSADLTHMGYLLLTVGIIWFAVLLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
LRRSQAMVRMGISLALTWIVMGTWGYSILEPMRTPQALMANAAKAIGPDGQLGLVKFKEQ
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHCCCCCCEEHHEECCC
FILFSPVDITHFSYLAPLEQQERNAWQWMHEGDKRFILVGDHQKLNCFNFTGAKSMGVAH
EEEECCCCHHHHHHHCCHHHHHHHHHHHHHCCCCEEEEEECCCEEEEEECCCCCCCCCCC
RDDWVLLSKDNLLPTCAEPDKRYQYFTPTPGRWMD
CCCEEEEECCCCCCCCCCCCCCCEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA