| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is coaD [H]
Identifier: 167622076
GI number: 167622076
Start: 149164
End: 149643
Strand: Direct
Name: coaD [H]
Synonym: Shal_0135
Alternate gene names: 167622076
Gene position: 149164-149643 (Clockwise)
Preceding gene: 167622075
Following gene: 167622077
Centisome position: 2.85
GC content: 46.25
Gene sequence:
>480_bases GTGCACAAGCGAGCCATATATCCAGGAACTTTTGACCCTGTTACCAATGGTCATGCCGATTTGATTGAGCGTGCGGCAAA TTTATTCGAGCATGTCATCATCGGCATTGCGGCAAACCCTTCAAAGCAGCCTAGATTTACCCTTGCAGAACGAGTCGAGC TACTCAAAACGGTTACTGCGCACCTAGATAATGTCGAGGTGGTGGGGTTTAGTGGTCTACTCGTTGATTTTGCAAAGGAG CAAAATGCCAGCGTGTTGGTCAGAGGCTTACGCGCGGTATCGGATTTTGAATATGAATTTCAGCTAGCCAATATGAATCG TCGTTTAAGCCCTGATCTTGAAAGCGTGTTTCTCACGCCTGCAGAAGAGAACTCATTTATCTCATCGACCTTAGTGAAAG AGGTGGCTCTTCATGGTGGCGATGTGAGTCAGTTTGTTCACGCAGAAGTCGCAAATGCATTAACAAAAAAGGCTAACTAG
Upstream 100 bases:
>100_bases TAACGAGTAGGATAGGGGCCTTAAAAAGCCCTTACATTAGGGCTATGAATTTCTAGGTAGTTCAGACTGCTAAGTTACAA CACTAAGGGTAGACTTTAAC
Downstream 100 bases:
>100_bases TTGTCCATGCATAAGTTTATTCGGTTTTATATTGTTAGGTTCTTATCTGTTTTAGCCTTAGTCTTCTCAGGGGCTAGCAT TGCAGCACCTTGGGTCGATA
Product: phosphopantetheine adenylyltransferase
Products: NA
Alternate protein names: Dephospho-CoA pyrophosphorylase; Pantetheine-phosphate adenylyltransferase; PPAT [H]
Number of amino acids: Translated: 159; Mature: 159
Protein sequence:
>159_residues MHKRAIYPGTFDPVTNGHADLIERAANLFEHVIIGIAANPSKQPRFTLAERVELLKTVTAHLDNVEVVGFSGLLVDFAKE QNASVLVRGLRAVSDFEYEFQLANMNRRLSPDLESVFLTPAEENSFISSTLVKEVALHGGDVSQFVHAEVANALTKKAN
Sequences:
>Translated_159_residues MHKRAIYPGTFDPVTNGHADLIERAANLFEHVIIGIAANPSKQPRFTLAERVELLKTVTAHLDNVEVVGFSGLLVDFAKE QNASVLVRGLRAVSDFEYEFQLANMNRRLSPDLESVFLTPAEENSFISSTLVKEVALHGGDVSQFVHAEVANALTKKAN >Mature_159_residues MHKRAIYPGTFDPVTNGHADLIERAANLFEHVIIGIAANPSKQPRFTLAERVELLKTVTAHLDNVEVVGFSGLLVDFAKE QNASVLVRGLRAVSDFEYEFQLANMNRRLSPDLESVFLTPAEENSFISSTLVKEVALHGGDVSQFVHAEVANALTKKAN
Specific function: Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate [H]
COG id: COG0669
COG function: function code H; Phosphopantetheine adenylyltransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial CoaD family [H]
Homologues:
Organism=Escherichia coli, GI1790065, Length=157, Percent_Identity=65.6050955414013, Blast_Score=218, Evalue=1e-58,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004821 - InterPro: IPR004820 - InterPro: IPR001980 - InterPro: IPR014729 [H]
Pfam domain/function: PF01467 CTP_transf_2 [H]
EC number: =2.7.7.3 [H]
Molecular weight: Translated: 17472; Mature: 17472
Theoretical pI: Translated: 5.93; Mature: 5.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHKRAIYPGTFDPVTNGHADLIERAANLFEHVIIGIAANPSKQPRFTLAERVELLKTVTA CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHH HLDNVEVVGFSGLLVDFAKEQNASVLVRGLRAVSDFEYEFQLANMNRRLSPDLESVFLTP HCCCEEEEEHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHEEECC AEENSFISSTLVKEVALHGGDVSQFVHAEVANALTKKAN CCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MHKRAIYPGTFDPVTNGHADLIERAANLFEHVIIGIAANPSKQPRFTLAERVELLKTVTA CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHH HLDNVEVVGFSGLLVDFAKEQNASVLVRGLRAVSDFEYEFQLANMNRRLSPDLESVFLTP HCCCEEEEEHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHEEECC AEENSFISSTLVKEVALHGGDVSQFVHAEVANALTKKAN CCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA