| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is cusS [H]
Identifier: 167622074
GI number: 167622074
Start: 146891
End: 148228
Strand: Direct
Name: cusS [H]
Synonym: Shal_0133
Alternate gene names: 167622074
Gene position: 146891-148228 (Clockwise)
Preceding gene: 167622073
Following gene: 167622075
Centisome position: 2.81
GC content: 48.06
Gene sequence:
>1338_bases GTGCTGGATATCGGTTACGCCAAGGGCATTAAGCCCTATCAGAGTAGTGCTTGGCGCATTACCATCATATTTTCAGCCCT AGTAACCGTCATTATTGGCACCTTGTTACTGGGGATGTATCGTCAGCTGATCAATGAACAAGAGCATCAGTTGGACCTGC ATCTCGATGCTGAAAGGACTCGCTATCAACAGATGGCACTGACCCTGGATAGACGTAGCTTTGCGACTCAGGTACGCGGT GCCGATCCTAAAGTTGCCTTGATTGTCTGGCGCGACACCGCCGATCTTGTCGGCTCTCTAAGCATGATCCCTAAAGATAT GCCTATGTTGCCCGAGAAGCATGAGTTTCCGGTATTTACTGGTGGTCCCGAAAAGCTACACATCTTAACTGGTGGCATGG TGATGACGCGCTATGGTCCTATGCTTATCGCGACCCGAGTGGATCAGCTCGGTGCCTTAATCGATAAATTTACCAATGCC GCAATTACTGCACTGATGTTGACCCTTGTGCTGACGCTGGCGCTGGGCTATCTATTTTCTAAAGCCATTTTACGCCGTCT CGTACAGTACAACCGCTTGAGCAAGCGGATTGAACAGGGGCAATATTCGACTCGATTACCAGTGAGCTGGCGTCAAGATG AATTTGATATGCTGGCACGGCAGTTTAACGGAGTACTCGATGCACTAGAGCAGAACTTAGCGGCTGTGCGTGGGGTCACC GACAATATCGCCCATGATCTACGTACACCTTTGTCTCACTTGCGTATTGGGCTTGAGCAACTGCCGAGTAAACCCAAAGA GGAGCTTGAAGAGGGCTGTGCCATCCTCACCGAAGAGCTAGATCATTGCTTAGCGACTTTCGATGCCATGCTGTCGTTGA CGCGCATCGAAGAGGGTCAGCAAACTCTGGAGTTACAAGATGTCAGCTTAATCAATATCAGCCAAGATCTGTTTGAAATG GCGGATGCGATGGCCGAATTTAATGGTCAATCATTGAAACTGACAACGGGTGAAGAGTTTCAGGTCCGTGGTGACAAGTA TCTATTGTTCCAAGCGCTATTTAACTTGGTCGATAATGCCGTTAAATATTCTGGAGAAGGTGCTGAAATTTGCATTTCAC AGAATCGCAATGTCATCTCTATTCAAGATAATGGTCCGGGGATCCCTGAGGCTTCTCGTGAGAAGGTATTCGAGCGCTTG GTGCGTTTAGACCCCAGTCGTCACCACAAAGGCACAGGGTTAGGTTTATCTATGGTGAAGGCGATTCTGTCGCGACATAA TGCTAAAATAGCGCTAACCGATAATCAGCCTGGCCTAAAGGTTATTATTACTTTTTAA
Upstream 100 bases:
>100_bases CATTTCGATCCGCGTACTAATGTTATCGATGTGCATATCGCTAAGCTAAGACGTAAGTTTGAAGAGCTAGGCCATGGCGA ATTAATCGAAACGGTTCGAG
Downstream 100 bases:
>100_bases TCTTTGTGCTAGCCAAGCTACGCTACTGCCAACCTGTGGAACCCCCTATCTATGTATCGAGTCATTGCCGATGAGCACGA CTTTATTGTTATTAATAAGT
Product: histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 445; Mature: 445
Protein sequence:
>445_residues MLDIGYAKGIKPYQSSAWRITIIFSALVTVIIGTLLLGMYRQLINEQEHQLDLHLDAERTRYQQMALTLDRRSFATQVRG ADPKVALIVWRDTADLVGSLSMIPKDMPMLPEKHEFPVFTGGPEKLHILTGGMVMTRYGPMLIATRVDQLGALIDKFTNA AITALMLTLVLTLALGYLFSKAILRRLVQYNRLSKRIEQGQYSTRLPVSWRQDEFDMLARQFNGVLDALEQNLAAVRGVT DNIAHDLRTPLSHLRIGLEQLPSKPKEELEEGCAILTEELDHCLATFDAMLSLTRIEEGQQTLELQDVSLINISQDLFEM ADAMAEFNGQSLKLTTGEEFQVRGDKYLLFQALFNLVDNAVKYSGEGAEICISQNRNVISIQDNGPGIPEASREKVFERL VRLDPSRHHKGTGLGLSMVKAILSRHNAKIALTDNQPGLKVIITF
Sequences:
>Translated_445_residues MLDIGYAKGIKPYQSSAWRITIIFSALVTVIIGTLLLGMYRQLINEQEHQLDLHLDAERTRYQQMALTLDRRSFATQVRG ADPKVALIVWRDTADLVGSLSMIPKDMPMLPEKHEFPVFTGGPEKLHILTGGMVMTRYGPMLIATRVDQLGALIDKFTNA AITALMLTLVLTLALGYLFSKAILRRLVQYNRLSKRIEQGQYSTRLPVSWRQDEFDMLARQFNGVLDALEQNLAAVRGVT DNIAHDLRTPLSHLRIGLEQLPSKPKEELEEGCAILTEELDHCLATFDAMLSLTRIEEGQQTLELQDVSLINISQDLFEM ADAMAEFNGQSLKLTTGEEFQVRGDKYLLFQALFNLVDNAVKYSGEGAEICISQNRNVISIQDNGPGIPEASREKVFERL VRLDPSRHHKGTGLGLSMVKAILSRHNAKIALTDNQPGLKVIITF >Mature_445_residues MLDIGYAKGIKPYQSSAWRITIIFSALVTVIIGTLLLGMYRQLINEQEHQLDLHLDAERTRYQQMALTLDRRSFATQVRG ADPKVALIVWRDTADLVGSLSMIPKDMPMLPEKHEFPVFTGGPEKLHILTGGMVMTRYGPMLIATRVDQLGALIDKFTNA AITALMLTLVLTLALGYLFSKAILRRLVQYNRLSKRIEQGQYSTRLPVSWRQDEFDMLARQFNGVLDALEQNLAAVRGVT DNIAHDLRTPLSHLRIGLEQLPSKPKEELEEGCAILTEELDHCLATFDAMLSLTRIEEGQQTLELQDVSLINISQDLFEM ADAMAEFNGQSLKLTTGEEFQVRGDKYLLFQALFNLVDNAVKYSGEGAEICISQNRNVISIQDNGPGIPEASREKVFERL VRLDPSRHHKGTGLGLSMVKAILSRHNAKIALTDNQPGLKVIITF
Specific function: Member of the two-component regulatory system CusS/CusR. Copper ion sensor. Could also be a silver ion sensor. Probably activates CusR by phosphorylation [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1786783, Length=332, Percent_Identity=28.0120481927711, Blast_Score=113, Evalue=2e-26, Organism=Escherichia coli, GI1788393, Length=260, Percent_Identity=30.7692307692308, Blast_Score=97, Evalue=2e-21, Organism=Escherichia coli, GI1787894, Length=266, Percent_Identity=28.5714285714286, Blast_Score=94, Evalue=1e-20, Organism=Escherichia coli, GI1788279, Length=280, Percent_Identity=26.7857142857143, Blast_Score=91, Evalue=1e-19, Organism=Escherichia coli, GI1790551, Length=284, Percent_Identity=27.4647887323944, Blast_Score=89, Evalue=8e-19, Organism=Escherichia coli, GI1790346, Length=237, Percent_Identity=27.4261603375527, Blast_Score=84, Evalue=1e-17, Organism=Escherichia coli, GI1786600, Length=207, Percent_Identity=28.0193236714976, Blast_Score=81, Evalue=1e-16, Organism=Escherichia coli, GI1789808, Length=281, Percent_Identity=25.6227758007117, Blast_Score=79, Evalue=4e-16, Organism=Escherichia coli, GI1789403, Length=213, Percent_Identity=27.6995305164319, Blast_Score=75, Evalue=6e-15, Organism=Escherichia coli, GI1787374, Length=282, Percent_Identity=25.177304964539, Blast_Score=74, Evalue=2e-14, Organism=Escherichia coli, GI1786912, Length=204, Percent_Identity=28.4313725490196, Blast_Score=72, Evalue=9e-14, Organism=Escherichia coli, GI1788713, Length=214, Percent_Identity=27.1028037383178, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI1790861, Length=204, Percent_Identity=26.9607843137255, Blast_Score=70, Evalue=3e-13, Organism=Escherichia coli, GI1790300, Length=220, Percent_Identity=28.1818181818182, Blast_Score=64, Evalue=2e-11, Organism=Escherichia coli, GI1789149, Length=211, Percent_Identity=26.5402843601896, Blast_Score=63, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR003660 - InterPro: IPR004358 - InterPro: IPR006290 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 49860; Mature: 49860
Theoretical pI: Translated: 6.36; Mature: 6.36
Prosite motif: PS50885 HAMP ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDIGYAKGIKPYQSSAWRITIIFSALVTVIIGTLLLGMYRQLINEQEHQLDLHLDAERT CCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCHHHCEEEEECHHHH RYQQMALTLDRRSFATQVRGADPKVALIVWRDTADLVGSLSMIPKDMPMLPEKHEFPVFT HHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHCCCCCCCCCCCCCCCEEE GGPEKLHILTGGMVMTRYGPMLIATRVDQLGALIDKFTNAAITALMLTLVLTLALGYLFS CCCCEEEEEECCEEEHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KAILRRLVQYNRLSKRIEQGQYSTRLPVSWRQDEFDMLARQFNGVLDALEQNLAAVRGVT HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCH DNIAHDLRTPLSHLRIGLEQLPSKPKEELEEGCAILTEELDHCLATFDAMLSLTRIEEGQ HHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH QTLELQDVSLINISQDLFEMADAMAEFNGQSLKLTTGEEFQVRGDKYLLFQALFNLVDNA HHHHHCCCEEEHHHHHHHHHHHHHHHCCCCEEEEECCCCEEECCCHHHHHHHHHHHHHHH VKYSGEGAEICISQNRNVISIQDNGPGIPEASREKVFERLVRLDPSRHHKGTGLGLSMVK HHCCCCCCEEEEECCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHH AILSRHNAKIALTDNQPGLKVIITF HHHHCCCCEEEEECCCCCCEEEEEC >Mature Secondary Structure MLDIGYAKGIKPYQSSAWRITIIFSALVTVIIGTLLLGMYRQLINEQEHQLDLHLDAERT CCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCHHHCEEEEECHHHH RYQQMALTLDRRSFATQVRGADPKVALIVWRDTADLVGSLSMIPKDMPMLPEKHEFPVFT HHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHCCCCCCCCCCCCCCCEEE GGPEKLHILTGGMVMTRYGPMLIATRVDQLGALIDKFTNAAITALMLTLVLTLALGYLFS CCCCEEEEEECCEEEHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KAILRRLVQYNRLSKRIEQGQYSTRLPVSWRQDEFDMLARQFNGVLDALEQNLAAVRGVT HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCH DNIAHDLRTPLSHLRIGLEQLPSKPKEELEEGCAILTEELDHCLATFDAMLSLTRIEEGQ HHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH QTLELQDVSLINISQDLFEMADAMAEFNGQSLKLTTGEEFQVRGDKYLLFQALFNLVDNA HHHHHCCCEEEHHHHHHHHHHHHHHHCCCCEEEEECCCCEEECCCHHHHHHHHHHHHHHH VKYSGEGAEICISQNRNVISIQDNGPGIPEASREKVFERLVRLDPSRHHKGTGLGLSMVK HHCCCCCCEEEEECCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHH AILSRHNAKIALTDNQPGLKVIITF HHHHCCCCEEEEECCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]