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The map label for this gene is 167622030

Identifier: 167622030

GI number: 167622030

Start: 98905

End: 99672

Strand: Reverse

Name: 167622030

Synonym: Shal_0089

Alternate gene names: NA

Gene position: 99672-98905 (Counterclockwise)

Preceding gene: 167622031

Following gene: 167622028

Centisome position: 1.91

GC content: 47.14

Gene sequence:

>768_bases
ATGTTTATGTGCATCCTATTTGTCGCGTTGCAGACTCACCCACAATTTCCATTAATCATCTGTGCCAATCGCGATGAGTT
TCATCATCGCCCTACAGAGGCCGCCCATTTTTGGCCAACCTCAAACAAGCTAGTCGCCGGAAAAGACCTAGAAGCTGGAG
GGACTTGGCTAGGAGTGAATCAACAAGGCAAGATAGCGGGGCTTACCAATATCCGCGCACCAGAACTCAACCAAAATGAT
ATGAGAAGCCGTGGAGAGCTGGTATTAAAGGCCTTAGAAGACGATGCTCTCAATCATGACTGGTTACAGATCCATAGCCG
TTTCTACAACCCATTTAATTTACTCTTTGGCGATGAAGAACAACTACAGTGCTTCGATAGCCGCAAGCAAAAATTAACCC
GACTCACCTCAGGGTTTCACTCCATCAGTAACGGTGCTCTCGATGATATTTGGCCTAAAATGGCACGAGGCACTCAGGCA
ATAGAGCAGCATATTAGCAACCACCCTATTCCCGATGTCGATGCTCTGCTTACGATTATGATGGATAACACCCAGGCACC
GGATGAAGAGCTGCCCCAGACAGGGGTAAGCTTAGAATGGGAAAGACACCTGTCTTCGGTCTATATTCGACATGAAGAGT
ATGGTACTCGCTCGACTAGCATCATTTTGAAAGACAAGCAGGGCAAGATACATTTCACCGAAGTGAGATATGACGGCAAG
GGGCGCAACTTAGGTCGAGATGAATTCGTTATAGAGGCAGCAAGTTAG

Upstream 100 bases:

>100_bases
ACCATAAGCATCGCCATTAACGACGGCTTTATCTGAGTCGTTCTAGCTAGCTTTTCTAAGTCATGGGCATTAACCTGTAT
CCATGACTTAGATTTGAGCT

Downstream 100 bases:

>100_bases
ACTCGCTTTATTGCGAGCCATTTATTTGCCTCATCTTACAGCTAGCTCATGCAATAGTAAGATGAGCTTATAAAGCATTA
ATCTTTTGCGTCACGCTCAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 255; Mature: 255

Protein sequence:

>255_residues
MFMCILFVALQTHPQFPLIICANRDEFHHRPTEAAHFWPTSNKLVAGKDLEAGGTWLGVNQQGKIAGLTNIRAPELNQND
MRSRGELVLKALEDDALNHDWLQIHSRFYNPFNLLFGDEEQLQCFDSRKQKLTRLTSGFHSISNGALDDIWPKMARGTQA
IEQHISNHPIPDVDALLTIMMDNTQAPDEELPQTGVSLEWERHLSSVYIRHEEYGTRSTSIILKDKQGKIHFTEVRYDGK
GRNLGRDEFVIEAAS

Sequences:

>Translated_255_residues
MFMCILFVALQTHPQFPLIICANRDEFHHRPTEAAHFWPTSNKLVAGKDLEAGGTWLGVNQQGKIAGLTNIRAPELNQND
MRSRGELVLKALEDDALNHDWLQIHSRFYNPFNLLFGDEEQLQCFDSRKQKLTRLTSGFHSISNGALDDIWPKMARGTQA
IEQHISNHPIPDVDALLTIMMDNTQAPDEELPQTGVSLEWERHLSSVYIRHEEYGTRSTSIILKDKQGKIHFTEVRYDGK
GRNLGRDEFVIEAAS
>Mature_255_residues
MFMCILFVALQTHPQFPLIICANRDEFHHRPTEAAHFWPTSNKLVAGKDLEAGGTWLGVNQQGKIAGLTNIRAPELNQND
MRSRGELVLKALEDDALNHDWLQIHSRFYNPFNLLFGDEEQLQCFDSRKQKLTRLTSGFHSISNGALDDIWPKMARGTQA
IEQHISNHPIPDVDALLTIMMDNTQAPDEELPQTGVSLEWERHLSSVYIRHEEYGTRSTSIILKDKQGKIHFTEVRYDGK
GRNLGRDEFVIEAAS

Specific function: Unknown

COG id: COG3332

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI190570176, Length=255, Percent_Identity=31.7647058823529, Blast_Score=129, Evalue=3e-30,
Organism=Caenorhabditis elegans, GI17563216, Length=259, Percent_Identity=29.3436293436293, Blast_Score=87, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI17566294, Length=261, Percent_Identity=27.9693486590038, Blast_Score=76, Evalue=1e-14,
Organism=Saccharomyces cerevisiae, GI6321566, Length=196, Percent_Identity=29.0816326530612, Blast_Score=66, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29060; Mature: 29060

Theoretical pI: Translated: 6.08; Mature: 6.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFMCILFVALQTHPQFPLIICANRDEFHHRPTEAAHFWPTSNKLVAGKDLEAGGTWLGVN
CHHHHEEHHHHCCCCCCEEEEECCHHHCCCCCCCEEECCCCCCEEECCCCCCCCCEEECC
QQGKIAGLTNIRAPELNQNDMRSRGELVLKALEDDALNHDWLQIHSRFYNPFNLLFGDEE
CCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEEEECCHH
QLQCFDSRKQKLTRLTSGFHSISNGALDDIWPKMARGTQAIEQHISNHPIPDVDALLTIM
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHEEE
MDNTQAPDEELPQTGVSLEWERHLSSVYIRHEEYGTRSTSIILKDKQGKIHFTEVRYDGK
ECCCCCCHHHCCCCCCCEEHHHHHHHEEEEHHHCCCCCEEEEEECCCCCEEEEEEEECCC
GRNLGRDEFVIEAAS
CCCCCCCEEEEEECC
>Mature Secondary Structure
MFMCILFVALQTHPQFPLIICANRDEFHHRPTEAAHFWPTSNKLVAGKDLEAGGTWLGVN
CHHHHEEHHHHCCCCCCEEEEECCHHHCCCCCCCEEECCCCCCEEECCCCCCCCCEEECC
QQGKIAGLTNIRAPELNQNDMRSRGELVLKALEDDALNHDWLQIHSRFYNPFNLLFGDEE
CCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEEEECCHH
QLQCFDSRKQKLTRLTSGFHSISNGALDDIWPKMARGTQAIEQHISNHPIPDVDALLTIM
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHEEE
MDNTQAPDEELPQTGVSLEWERHLSSVYIRHEEYGTRSTSIILKDKQGKIHFTEVRYDGK
ECCCCCCHHHCCCCCCCEEHHHHHHHEEEEHHHCCCCCEEEEEECCCCCEEEEEEEECCC
GRNLGRDEFVIEAAS
CCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA