| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
Click here to switch to the map view.
The map label for this gene is mtnC [H]
Identifier: 167622008
GI number: 167622008
Start: 75502
End: 76179
Strand: Reverse
Name: mtnC [H]
Synonym: Shal_0067
Alternate gene names: 167622008
Gene position: 76179-75502 (Counterclockwise)
Preceding gene: 167622009
Following gene: 167622007
Centisome position: 1.46
GC content: 43.66
Gene sequence:
>678_bases ATGGGTATCAGAGCCATCGTCGTTGATACAGCCGGTACGACTACCGACCTTAACTTTATTGAAGAGATTCTCTTTCCTTA TTCAGCTAAGGCCTTACCCGCTTTTCTTGAAGAAAATCAACATAATGTACTCGTAGAGAACTGTATTTGCGATGTGCAAG ATATTGCACTTGAACCAGATGCCAGTCTTGCTCGTGTAACTGAAATTTTACTGCAGTGGATTAAAGAAGACCGTAAAGCT ACACCACTGAAAACCATTCAAGGTTTGATCTGGAAACAGGGCTACGCCAATGGTGAATTTAAGGGCCATATCTTCCCTGA TTTTATCGAAGCATTAGATGGCTACAAGCAGCAAGGTCTACGTGTTTATAGCTTCTCTTCAGGCTCTGTTGAGGCGCAAA AGTTATTGTTTAGCCACAGTGATGCAGGTGATCTCAACGATAAGTTTAATGGCCACTTTGACACTCGCACAGGCAACAAG CGCTTTAAGCAGGCATATTGCAATATCGTCAACACTATCAGCCTAAGCCCGAAGCAGATTTTGTTTGTTTCTGACGTACT TGAAGAGCTTAAAGCCGCTAGTGAAGCAGGCTTAAATGTGGTGCAGATGGTACGCGACGATAGCCAACGCACGGGCGACT TTAAAACGATTAGCAGCTTTGCAGAGCTAAGCATTTAG
Upstream 100 bases:
>100_bases GGCGCGATTACACTAGCCAAATCGAACGATTCAGCTTAGGATCTGAGCAATAAACCGATCTCGACTACACGTTATATACA TTGCGGAGTGACCAAACATT
Downstream 100 bases:
>100_bases CTCTATTGATTAATTAGAACGAAAGGCATTCTTTATGAATGCCTTTTTTGTCTCTATAACTTCCATTCTGTAATAGACAT ATAAAGCTTTTCACGACATT
Product: 2,3-diketo-5-methylthio-1-phosphopentane phosphatase
Products: NA
Alternate protein names: 2,3-diketo-5-methylthio-1-phosphopentane phosphatase [H]
Number of amino acids: Translated: 225; Mature: 224
Protein sequence:
>225_residues MGIRAIVVDTAGTTTDLNFIEEILFPYSAKALPAFLEENQHNVLVENCICDVQDIALEPDASLARVTEILLQWIKEDRKA TPLKTIQGLIWKQGYANGEFKGHIFPDFIEALDGYKQQGLRVYSFSSGSVEAQKLLFSHSDAGDLNDKFNGHFDTRTGNK RFKQAYCNIVNTISLSPKQILFVSDVLEELKAASEAGLNVVQMVRDDSQRTGDFKTISSFAELSI
Sequences:
>Translated_225_residues MGIRAIVVDTAGTTTDLNFIEEILFPYSAKALPAFLEENQHNVLVENCICDVQDIALEPDASLARVTEILLQWIKEDRKA TPLKTIQGLIWKQGYANGEFKGHIFPDFIEALDGYKQQGLRVYSFSSGSVEAQKLLFSHSDAGDLNDKFNGHFDTRTGNK RFKQAYCNIVNTISLSPKQILFVSDVLEELKAASEAGLNVVQMVRDDSQRTGDFKTISSFAELSI >Mature_224_residues GIRAIVVDTAGTTTDLNFIEEILFPYSAKALPAFLEENQHNVLVENCICDVQDIALEPDASLARVTEILLQWIKEDRKAT PLKTIQGLIWKQGYANGEFKGHIFPDFIEALDGYKQQGLRVYSFSSGSVEAQKLLFSHSDAGDLNDKFNGHFDTRTGNKR FKQAYCNIVNTISLSPKQILFVSDVLEELKAASEAGLNVVQMVRDDSQRTGDFKTISSFAELSI
Specific function: Bifunctional enzyme that catalyzes the enolization of 2,3-diketo-5-methylthiopentyl-1-phosphate (DK-MTP-1-P) into the intermediate 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate (HK-MTPenyl-1-P), which is then dephosphorylated to form the acireductone
COG id: COG4229
COG function: function code C; Predicted enolase-phosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAD-like hydrolase superfamily. MasA/mtnC family [H]
Homologues:
Organism=Homo sapiens, GI10864017, Length=252, Percent_Identity=36.5079365079365, Blast_Score=143, Evalue=1e-34, Organism=Caenorhabditis elegans, GI115533232, Length=215, Percent_Identity=37.6744186046512, Blast_Score=146, Evalue=8e-36, Organism=Saccharomyces cerevisiae, GI6320797, Length=201, Percent_Identity=32.3383084577114, Blast_Score=105, Evalue=6e-24, Organism=Drosophila melanogaster, GI281360080, Length=237, Percent_Identity=37.1308016877637, Blast_Score=166, Evalue=1e-41, Organism=Drosophila melanogaster, GI24644163, Length=237, Percent_Identity=37.1308016877637, Blast_Score=166, Evalue=1e-41,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010041 - InterPro: IPR023214 - InterPro: IPR006439 - InterPro: IPR005833 [H]
Pfam domain/function: NA
EC number: =3.1.3.77 [H]
Molecular weight: Translated: 25071; Mature: 24939
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGIRAIVVDTAGTTTDLNFIEEILFPYSAKALPAFLEENQHNVLVENCICDVQDIALEPD CCCEEEEEECCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCCCEEHHHHHCCHHHHCCCCC ASLARVTEILLQWIKEDRKATPLKTIQGLIWKQGYANGEFKGHIFPDFIEALDGYKQQGL CHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCC RVYSFSSGSVEAQKLLFSHSDAGDLNDKFNGHFDTRTGNKRFKQAYCNIVNTISLSPKQI EEEEECCCCHHHHHHHHHCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHCCCCCHHH LFVSDVLEELKAASEAGLNVVQMVRDDSQRTGDFKTISSFAELSI HHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCHHHHHHHHHHCC >Mature Secondary Structure GIRAIVVDTAGTTTDLNFIEEILFPYSAKALPAFLEENQHNVLVENCICDVQDIALEPD CCEEEEEECCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCCCEEHHHHHCCHHHHCCCCC ASLARVTEILLQWIKEDRKATPLKTIQGLIWKQGYANGEFKGHIFPDFIEALDGYKQQGL CHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCC RVYSFSSGSVEAQKLLFSHSDAGDLNDKFNGHFDTRTGNKRFKQAYCNIVNTISLSPKQI EEEEECCCCHHHHHHHHHCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHCCCCCHHH LFVSDVLEELKAASEAGLNVVQMVRDDSQRTGDFKTISSFAELSI HHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA