| Definition | Thermoanaerobacter sp. X514 chromosome, complete genome. |
|---|---|
| Accession | NC_010320 |
| Length | 2,457,259 |
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The map label for this gene is thrS [H]
Identifier: 167040680
GI number: 167040680
Start: 2069405
End: 2071309
Strand: Reverse
Name: thrS [H]
Synonym: Teth514_2057
Alternate gene names: 167040680
Gene position: 2071309-2069405 (Counterclockwise)
Preceding gene: 167040681
Following gene: 167040679
Centisome position: 84.29
GC content: 35.33
Gene sequence:
>1905_bases ATGATTATAATATTAAAGGATGGCACACAAAGAGAATTTGAAAAGGGTATGACAGTTTATGAAATAGCTAAAAGTATAAG TGAAAGATTAGCAAAAGAAGCCGTCGGTGGAAAGTTTAATGGCAAAGTAGTGGAACTTAATACAAAAATTGAAGAGGACG GAAAATTAGAAATTTTGACTTTTGATGATGAAGAAGGAAAAAAAATTTATTGGCACACTTCTTCCCATATTTTAGCACAA GCTGTAAAAAGGCTTTTTAAAGATGTGAAATTGGCAATTGGTCCGGCTATAGACAATGGCTTTTACTATGACTTCGACAC AGATAGGCCTTTTACTACAGAAGACTTTGAAGCTATAGAGCAGGAAATGAATAAAATTATAAAAGAAGATTATAAGTTGG AAAGATTTGTCCTTCCAAAGGATGAAGCAATAAAATTAATGGAGGAAAAAGGTGAACCTTATAAAGTGGAGCTAATTGAA GAAATACCAGAAGGGGAGGAAATTTCTTTTTACAAGCAAGGAGAATTTACTGACCTTTGTGCTGGGCCCCATCTTATGTC AACAGGCATGGTAAAAACTATTAAATTGTTGTCAGTTGCTGGCGCCTACTGGAAAGGCGACGAAAAAAATAAAATGCTTC AAAGAATATATGGAATAAGCTTTCCTAAAAAAAGCATGTTAGATCAATATTTACATATGTTAGAGGAAGCTAAAAAGAGA GACCATAGAAAATTAGGGAAAGAGTTAGATTTGTTTAGTATCCACCCTGAAGGACCAGGTTTTCCTTTTTTCCATCCTAA GGGAATGATTATAAGAAACATTTTAGAAGATTTTTGGCGAAAAGAACATATAAAGCATGGTTATCAGGAAATAAAAACTC CTATAATTTTGAATGAAGAATTATGGCGTAGGTCAGGACACTGGGACCACTATAAAGAGAATATGTATTTCACTGAAATA GACGGAGAGACTTATGCAATAAAGCCTATGAATTGTCCTGGAGCAATGCTTGTTTACAAGTCTACAATGCACAGTTACAG AGATTTACCCTTAAGACTTTGTGAATTGGGTTTAGTGCATAGACATGAACTCTCAGGAGTTTTGCATGGGCTTATGAGAG TAAGAAGTTTTACTCAGGATGATGCTCACTTGTTTATGACTCCTGAGCAGGTTGAAGATGAAATTTTAGGGGTTATAAAT TTAGTGGATTATTTCTATAAAATTTTTGGCTTTGAGTATTTTGTTGAATTGTCTACACGTCCTGAAAATTCTATGGGGTC TGATGAAGACTGGGAATTGGCTACAAATGCTTTGATTTCTGCTTTAAATCGCGTGAATTTACCATATAAAGTTAATGAGG GGGATGGTGCATTTTACGGACCCAAAATAGATTTTCATTTAAAAGACAGCATAGGTCGTACGTGGCAATGTGGAACTATC CAATTAGATTTCCAGATGCCTGAAAGGTTTGAACTGGAGTATATAGGCCCAGATGGAGAAAAACACAGACCTATAATGTT GCACAGGGTAATTTACGGAAGTATAGAAAGATTTATTGGAATTCTTACTGAACATTTTGCAGGGGCTTTCCCAACTTGGC TGGCGCCAGTACAAGTTAGAGTTTTGCCTATATCTGATAAACACTATGCTTATGCCCAAAATGTATATGGGCGTCTGTTG GAAAATGACATAAGAGCTGAATTGGACGACAGAAATGAAAAAGTAGGATACAAAATACGAGAGGCACAACTTCAAAAGAT TCCCTATATGCTGATTGTAGGGGATAAAGAAGTAGAACAAGGGACAGTATCTTTAAGGTCAAGAAAAGAAGGGGATCTAG GTGCTATTTCCTTAAGTGAGTTTATAGAAAAAATTCTTAAAGAAATCGCTACAAAAGCTTTATAA
Upstream 100 bases:
>100_bases CCAGAGTATAAAAAAGAGTGGAACCGCAGATAACCTCTGCCTCTTTACGGGGTAAGAGGTTTTTTATTTAAGAGAAAAAT TTTACAAAGGAGGTAATTGA
Downstream 100 bases:
>100_bases AATCAAAATGCTCCTTTAAGGGGCATTTTGATTTATTGTTTATTGAAAGAATTTAAAAAACGTGATAATCTAAAATTAAA ATATCAATTTTGAGGGAGAG
Product: threonyl-tRNA synthetase
Products: NA
Alternate protein names: Threonine--tRNA ligase; ThrRS [H]
Number of amino acids: Translated: 634; Mature: 634
Protein sequence:
>634_residues MIIILKDGTQREFEKGMTVYEIAKSISERLAKEAVGGKFNGKVVELNTKIEEDGKLEILTFDDEEGKKIYWHTSSHILAQ AVKRLFKDVKLAIGPAIDNGFYYDFDTDRPFTTEDFEAIEQEMNKIIKEDYKLERFVLPKDEAIKLMEEKGEPYKVELIE EIPEGEEISFYKQGEFTDLCAGPHLMSTGMVKTIKLLSVAGAYWKGDEKNKMLQRIYGISFPKKSMLDQYLHMLEEAKKR DHRKLGKELDLFSIHPEGPGFPFFHPKGMIIRNILEDFWRKEHIKHGYQEIKTPIILNEELWRRSGHWDHYKENMYFTEI DGETYAIKPMNCPGAMLVYKSTMHSYRDLPLRLCELGLVHRHELSGVLHGLMRVRSFTQDDAHLFMTPEQVEDEILGVIN LVDYFYKIFGFEYFVELSTRPENSMGSDEDWELATNALISALNRVNLPYKVNEGDGAFYGPKIDFHLKDSIGRTWQCGTI QLDFQMPERFELEYIGPDGEKHRPIMLHRVIYGSIERFIGILTEHFAGAFPTWLAPVQVRVLPISDKHYAYAQNVYGRLL ENDIRAELDDRNEKVGYKIREAQLQKIPYMLIVGDKEVEQGTVSLRSRKEGDLGAISLSEFIEKILKEIATKAL
Sequences:
>Translated_634_residues MIIILKDGTQREFEKGMTVYEIAKSISERLAKEAVGGKFNGKVVELNTKIEEDGKLEILTFDDEEGKKIYWHTSSHILAQ AVKRLFKDVKLAIGPAIDNGFYYDFDTDRPFTTEDFEAIEQEMNKIIKEDYKLERFVLPKDEAIKLMEEKGEPYKVELIE EIPEGEEISFYKQGEFTDLCAGPHLMSTGMVKTIKLLSVAGAYWKGDEKNKMLQRIYGISFPKKSMLDQYLHMLEEAKKR DHRKLGKELDLFSIHPEGPGFPFFHPKGMIIRNILEDFWRKEHIKHGYQEIKTPIILNEELWRRSGHWDHYKENMYFTEI DGETYAIKPMNCPGAMLVYKSTMHSYRDLPLRLCELGLVHRHELSGVLHGLMRVRSFTQDDAHLFMTPEQVEDEILGVIN LVDYFYKIFGFEYFVELSTRPENSMGSDEDWELATNALISALNRVNLPYKVNEGDGAFYGPKIDFHLKDSIGRTWQCGTI QLDFQMPERFELEYIGPDGEKHRPIMLHRVIYGSIERFIGILTEHFAGAFPTWLAPVQVRVLPISDKHYAYAQNVYGRLL ENDIRAELDDRNEKVGYKIREAQLQKIPYMLIVGDKEVEQGTVSLRSRKEGDLGAISLSEFIEKILKEIATKAL >Mature_634_residues MIIILKDGTQREFEKGMTVYEIAKSISERLAKEAVGGKFNGKVVELNTKIEEDGKLEILTFDDEEGKKIYWHTSSHILAQ AVKRLFKDVKLAIGPAIDNGFYYDFDTDRPFTTEDFEAIEQEMNKIIKEDYKLERFVLPKDEAIKLMEEKGEPYKVELIE EIPEGEEISFYKQGEFTDLCAGPHLMSTGMVKTIKLLSVAGAYWKGDEKNKMLQRIYGISFPKKSMLDQYLHMLEEAKKR DHRKLGKELDLFSIHPEGPGFPFFHPKGMIIRNILEDFWRKEHIKHGYQEIKTPIILNEELWRRSGHWDHYKENMYFTEI DGETYAIKPMNCPGAMLVYKSTMHSYRDLPLRLCELGLVHRHELSGVLHGLMRVRSFTQDDAHLFMTPEQVEDEILGVIN LVDYFYKIFGFEYFVELSTRPENSMGSDEDWELATNALISALNRVNLPYKVNEGDGAFYGPKIDFHLKDSIGRTWQCGTI QLDFQMPERFELEYIGPDGEKHRPIMLHRVIYGSIERFIGILTEHFAGAFPTWLAPVQVRVLPISDKHYAYAQNVYGRLL ENDIRAELDDRNEKVGYKIREAQLQKIPYMLIVGDKEVEQGTVSLRSRKEGDLGAISLSEFIEKILKEIATKAL
Specific function: Thrs Is Also A Translational Repressor Protein, It Controls The Translation Of Its Own Gene By Binding To Its mRNA. [C]
COG id: COG0441
COG function: function code J; Threonyl-tRNA synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II aminoacyl-tRNA synthetase family [H]
Homologues:
Organism=Homo sapiens, GI38202255, Length=636, Percent_Identity=44.3396226415094, Blast_Score=546, Evalue=1e-155, Organism=Homo sapiens, GI38570111, Length=620, Percent_Identity=43.8709677419355, Blast_Score=543, Evalue=1e-154, Organism=Homo sapiens, GI20070344, Length=635, Percent_Identity=38.8976377952756, Blast_Score=473, Evalue=1e-133, Organism=Escherichia coli, GI1788013, Length=635, Percent_Identity=48.0314960629921, Blast_Score=640, Evalue=0.0, Organism=Caenorhabditis elegans, GI71984184, Length=629, Percent_Identity=41.335453100159, Blast_Score=527, Evalue=1e-150, Organism=Caenorhabditis elegans, GI71984192, Length=629, Percent_Identity=41.335453100159, Blast_Score=527, Evalue=1e-150, Organism=Saccharomyces cerevisiae, GI6322112, Length=647, Percent_Identity=41.8856259659969, Blast_Score=538, Evalue=1e-154, Organism=Saccharomyces cerevisiae, GI6322654, Length=414, Percent_Identity=38.8888888888889, Blast_Score=303, Evalue=5e-83, Organism=Drosophila melanogaster, GI24583839, Length=628, Percent_Identity=44.2675159235669, Blast_Score=563, Evalue=1e-160, Organism=Drosophila melanogaster, GI24583842, Length=628, Percent_Identity=44.2675159235669, Blast_Score=563, Evalue=1e-160, Organism=Drosophila melanogaster, GI28574141, Length=628, Percent_Identity=44.2675159235669, Blast_Score=563, Evalue=1e-160,
Paralogues:
None
Copy number: 700 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002314 - InterPro: IPR006195 - InterPro: IPR004154 - InterPro: IPR012675 - InterPro: IPR004095 - InterPro: IPR012676 - InterPro: IPR002320 - InterPro: IPR018163 - InterPro: IPR012947 [H]
Pfam domain/function: PF03129 HGTP_anticodon; PF02824 TGS; PF00587 tRNA-synt_2b; PF07973 tRNA_SAD [H]
EC number: =6.1.1.3 [H]
Molecular weight: Translated: 73516; Mature: 73516
Theoretical pI: Translated: 5.55; Mature: 5.55
Prosite motif: PS50862 AA_TRNA_LIGASE_II
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIIILKDGTQREFEKGMTVYEIAKSISERLAKEAVGGKFNGKVVELNTKIEEDGKLEILT CEEEEECCCHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCEEEEE FDDEEGKKIYWHTSSHILAQAVKRLFKDVKLAIGPAIDNGFYYDFDTDRPFTTEDFEAIE ECCCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCEECCCEEEECCCCCCCCCHHHHHHH QEMNKIIKEDYKLERFVLPKDEAIKLMEEKGEPYKVELIEEIPEGEEISFYKQGEFTDLC HHHHHHHHHCCCHHEEECCCHHHHHHHHHCCCCEEEHHHHHCCCCCCEEEEECCCCCHHC AGPHLMSTGMVKTIKLLSVAGAYWKGDEKNKMLQRIYGISFPKKSMLDQYLHMLEEAKKR CCCHHHHCCHHHHHHHHHHHCHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH DHRKLGKELDLFSIHPEGPGFPFFHPKGMIIRNILEDFWRKEHIKHGYQEIKTPIILNEE HHHHHCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECHH LWRRSGHWDHYKENMYFTEIDGETYAIKPMNCPGAMLVYKSTMHSYRDLPLRLCELGLVH HHHCCCCCCHHHCCEEEEEECCCEEEEECCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHH RHELSGVLHGLMRVRSFTQDDAHLFMTPEQVEDEILGVINLVDYFYKIFGFEYFVELSTR HHHHHHHHHHHHHHHHCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEECC PENSMGSDEDWELATNALISALNRVNLPYKVNEGDGAFYGPKIDFHLKDSIGRTWQCGTI CCCCCCCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCEECCEEEEEECCCCCCEEECCEE QLDFQMPERFELEYIGPDGEKHRPIMLHRVIYGSIERFIGILTEHFAGAFPTWLAPVQVR EEEECCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCEEEE VLPISDKHYAYAQNVYGRLLENDIRAELDDRNEKVGYKIREAQLQKIPYMLIVGDKEVEQ EEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCEEEEECCCCCCC GTVSLRSRKEGDLGAISLSEFIEKILKEIATKAL CHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHCC >Mature Secondary Structure MIIILKDGTQREFEKGMTVYEIAKSISERLAKEAVGGKFNGKVVELNTKIEEDGKLEILT CEEEEECCCHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCEEEEE FDDEEGKKIYWHTSSHILAQAVKRLFKDVKLAIGPAIDNGFYYDFDTDRPFTTEDFEAIE ECCCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCEECCCEEEECCCCCCCCCHHHHHHH QEMNKIIKEDYKLERFVLPKDEAIKLMEEKGEPYKVELIEEIPEGEEISFYKQGEFTDLC HHHHHHHHHCCCHHEEECCCHHHHHHHHHCCCCEEEHHHHHCCCCCCEEEEECCCCCHHC AGPHLMSTGMVKTIKLLSVAGAYWKGDEKNKMLQRIYGISFPKKSMLDQYLHMLEEAKKR CCCHHHHCCHHHHHHHHHHHCHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH DHRKLGKELDLFSIHPEGPGFPFFHPKGMIIRNILEDFWRKEHIKHGYQEIKTPIILNEE HHHHHCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECHH LWRRSGHWDHYKENMYFTEIDGETYAIKPMNCPGAMLVYKSTMHSYRDLPLRLCELGLVH HHHCCCCCCHHHCCEEEEEECCCEEEEECCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHH RHELSGVLHGLMRVRSFTQDDAHLFMTPEQVEDEILGVINLVDYFYKIFGFEYFVELSTR HHHHHHHHHHHHHHHHCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEECC PENSMGSDEDWELATNALISALNRVNLPYKVNEGDGAFYGPKIDFHLKDSIGRTWQCGTI CCCCCCCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCEECCEEEEEECCCCCCEEECCEE QLDFQMPERFELEYIGPDGEKHRPIMLHRVIYGSIERFIGILTEHFAGAFPTWLAPVQVR EEEECCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCEEEE VLPISDKHYAYAQNVYGRLLENDIRAELDDRNEKVGYKIREAQLQKIPYMLIVGDKEVEQ EEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCEEEEECCCCCCC GTVSLRSRKEGDLGAISLSEFIEKILKEIATKAL CHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11997336 [H]