Definition | Thermoanaerobacter sp. X514 chromosome, complete genome. |
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Accession | NC_010320 |
Length | 2,457,259 |
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The map label for this gene is 167040613
Identifier: 167040613
GI number: 167040613
Start: 2000762
End: 2001466
Strand: Reverse
Name: 167040613
Synonym: Teth514_1990
Alternate gene names: NA
Gene position: 2001466-2000762 (Counterclockwise)
Preceding gene: 167040614
Following gene: 167040612
Centisome position: 81.45
GC content: 36.6
Gene sequence:
>705_bases ATGCCATTAAGCTATATTTTGCTTTCTATTACAGGATTGGTCGTTTTGTTCGGATTTGCCCATAGAGTATTAGATAGGAT GAAAATGACAGATACATGGGCTTTTTTGGTGATAATTGGGATGATTATAGGGACATTAATACCTAATATTCCTATAACAA AAACTGTGTCTATAAACATAGGTGGAGCTGTTATCCCTATAGCAGTATGTGTGTATCTTTTTTTGAAAGCAGAAAGTACC AGAGAAAGAGTAAATGCAGTTGTAGTATCAATTGTTGCAGGAATAGCTGTTTTTATTGCAGGGCGAATACTTCCTGCAGA ACCTGAAGCCATGATTATTGAGCCTAAGTATATTTATGGTATTGTTGGAGGTTTAATTGCGTATCTTTTTTCACGTTCGA GAAGAAGTGCTTTTATTGCAGGGGTGATGGGAATAATACTGGCAAATGTAATGCAGGCAGTCTCAAACTACTTGACAGGG ACAAGAGGAGCCGTATCCATAGGAGGAGCTGGATTTTTTGATTCGGTAGTTATATCTATGATAATTGCCGTGTTTTTGTC TGAAATAATTGGGGAAACAAGAGAAAAAATACAAGGAGGTACTTCTAAAAAGCATCTTGAACCTAGGGAGGGTATGGCTA GCAGCTTGATAGATACTAACAAAAAAGAAGAGGGTGATAAAAATGAACAAAAGGAAGATGAATAA
Upstream 100 bases:
>100_bases ATGCAAAAAGCGCTCACTCGAAAAAGTGAGCGCTTTTTGCATATTTTTTTTGCATTGTGTAAAACATATTTTTAAGAAAA AAAGTTAGGGAGTGATTTTG
Downstream 100 bases:
>100_bases AGTTACAATATTAATCTTATTGGTTATTGGATTTTTATCTTTTTCTATTAGCAGTTATGCAGAGAAGCAGGCTGAATTAC AACCCGATTATTACACAGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 234; Mature: 233
Protein sequence:
>234_residues MPLSYILLSITGLVVLFGFAHRVLDRMKMTDTWAFLVIIGMIIGTLIPNIPITKTVSINIGGAVIPIAVCVYLFLKAEST RERVNAVVVSIVAGIAVFIAGRILPAEPEAMIIEPKYIYGIVGGLIAYLFSRSRRSAFIAGVMGIILANVMQAVSNYLTG TRGAVSIGGAGFFDSVVISMIIAVFLSEIIGETREKIQGGTSKKHLEPREGMASSLIDTNKKEEGDKNEQKEDE
Sequences:
>Translated_234_residues MPLSYILLSITGLVVLFGFAHRVLDRMKMTDTWAFLVIIGMIIGTLIPNIPITKTVSINIGGAVIPIAVCVYLFLKAEST RERVNAVVVSIVAGIAVFIAGRILPAEPEAMIIEPKYIYGIVGGLIAYLFSRSRRSAFIAGVMGIILANVMQAVSNYLTG TRGAVSIGGAGFFDSVVISMIIAVFLSEIIGETREKIQGGTSKKHLEPREGMASSLIDTNKKEEGDKNEQKEDE >Mature_233_residues PLSYILLSITGLVVLFGFAHRVLDRMKMTDTWAFLVIIGMIIGTLIPNIPITKTVSINIGGAVIPIAVCVYLFLKAESTR ERVNAVVVSIVAGIAVFIAGRILPAEPEAMIIEPKYIYGIVGGLIAYLFSRSRRSAFIAGVMGIILANVMQAVSNYLTGT RGAVSIGGAGFFDSVVISMIIAVFLSEIIGETREKIQGGTSKKHLEPREGMASSLIDTNKKEEGDKNEQKEDE
Specific function: Unknown
COG id: COG4089
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25221; Mature: 25090
Theoretical pI: Translated: 8.42; Mature: 8.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLSYILLSITGLVVLFGFAHRVLDRMKMTDTWAFLVIIGMIIGTLIPNIPITKTVSINI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEC GGAVIPIAVCVYLFLKAESTRERVNAVVVSIVAGIAVFIAGRILPAEPEAMIIEPKYIYG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECHHHHHH IVGGLIAYLFSRSRRSAFIAGVMGIILANVMQAVSNYLTGTRGAVSIGGAGFFDSVVISM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHH IIAVFLSEIIGETREKIQGGTSKKHLEPREGMASSLIDTNKKEEGDKNEQKEDE HHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure PLSYILLSITGLVVLFGFAHRVLDRMKMTDTWAFLVIIGMIIGTLIPNIPITKTVSINI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEC GGAVIPIAVCVYLFLKAESTRERVNAVVVSIVAGIAVFIAGRILPAEPEAMIIEPKYIYG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECHHHHHH IVGGLIAYLFSRSRRSAFIAGVMGIILANVMQAVSNYLTGTRGAVSIGGAGFFDSVVISM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHH IIAVFLSEIIGETREKIQGGTSKKHLEPREGMASSLIDTNKKEEGDKNEQKEDE HHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA