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The map label for this gene is yvrB [H]

Identifier: 167040562

GI number: 167040562

Start: 1943381

End: 1944373

Strand: Reverse

Name: yvrB [H]

Synonym: Teth514_1933

Alternate gene names: 167040562

Gene position: 1944373-1943381 (Counterclockwise)

Preceding gene: 167040563

Following gene: 167040561

Centisome position: 79.13

GC content: 36.66

Gene sequence:

>993_bases
GTGGGAGTAAAAAAAGGGATATATTTTGGTACAGCCTTTTCACTGCTTGTCTTTACCATGATTTTATCAATTTCTGCAGG
GGCGGTAAAAATACCCCTGCAGGAGATTTTAAATGTTTTTTTGGGCGGTGGCAGTGAAACCTCTAGGACAATAATCCTTA
ATTTAAGACTTCCAAGAGCTATTGAATCTGCGATTGTAGGTATGGGACTTTCTGTTGTTGGGACATTTTTTCAAGGGCTT
TTGAGAAATCCAATGGCAGACCCTTATGTATTGGGTGTATCATCAGGAGCGGCTTTTGGAGCTACTATTGCGATAATTTT
GGGGCTTGGAATATTTGGACTGAGTTTTATGGCTTTTGTTACTTCTTTAATGACTGTATTTTTCGTATACACTATTTCTA
AAACTGGCACAAGAGTATCCATGACCACAATGTTATTGGCAGGTATAGCTATAAGTGCTTTTATGTCTGCAATTATCTCT
CTCATGATGCTTTTAAACCATGATGAGTTTTCTCGAATTGTTTTTTGGACTATGGGAGGATTTAGCCTCATAAATTGGAA
TAGTGTGGTCTTTACTACTCCTATAATAGTAATTGGCTCTTTTGTGATGTATGTATTTTCAAGGGATGTAAATGCGATAT
TGACAGGAGAAGAAGTTGCCGAACATTTAGGTGTCAACACAGAACTAGTCAAGAAAATAATTCTTATTACAGGGTCTTTG
GTGACTGCAACTGCTGTGTCAGTTGGTGGAATTATAGGTTTTGTGGGACTTATTGTGCCTCATATATCAAGGCTTATTGT
AGGACCTGACAATAGAATTCTTGTACCTTTTAGTGCTATATCAGGAGCGATATTTTTAACTTTTGCAGACTTATTAGCAC
GAATTATTTTAAAGCCAATGGAAATTCCAATTGGGATAATTACAGCAGCACTTGGAGGACCATTCTTTTTATATCTGTTA
ATAAAGAGCAAACAAAAAAGTGAAGGAATGTGA

Upstream 100 bases:

>100_bases
GTGATAAGCAATGACGACATAATATCAAGAGCTTCTAATAGAATTGTTTTAGGACTTGAAGAAATCGCAAAATTCTTACA
TCCGGAGGCATTTAAGTAAA

Downstream 100 bases:

>100_bases
TGATATGGCTATTTTACAGGTGGATAATTTGCACTTTTCTTATGAAGAAAAGGAAGTTTTAAAAGGAATAGATTTTACCA
TAAACAAAAATATGGTTTTA

Product: transport system permease

Products: ADP; phosphate; iron dicitrate [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 330; Mature: 329

Protein sequence:

>330_residues
MGVKKGIYFGTAFSLLVFTMILSISAGAVKIPLQEILNVFLGGGSETSRTIILNLRLPRAIESAIVGMGLSVVGTFFQGL
LRNPMADPYVLGVSSGAAFGATIAIILGLGIFGLSFMAFVTSLMTVFFVYTISKTGTRVSMTTMLLAGIAISAFMSAIIS
LMMLLNHDEFSRIVFWTMGGFSLINWNSVVFTTPIIVIGSFVMYVFSRDVNAILTGEEVAEHLGVNTELVKKIILITGSL
VTATAVSVGGIIGFVGLIVPHISRLIVGPDNRILVPFSAISGAIFLTFADLLARIILKPMEIPIGIITAALGGPFFLYLL
IKSKQKSEGM

Sequences:

>Translated_330_residues
MGVKKGIYFGTAFSLLVFTMILSISAGAVKIPLQEILNVFLGGGSETSRTIILNLRLPRAIESAIVGMGLSVVGTFFQGL
LRNPMADPYVLGVSSGAAFGATIAIILGLGIFGLSFMAFVTSLMTVFFVYTISKTGTRVSMTTMLLAGIAISAFMSAIIS
LMMLLNHDEFSRIVFWTMGGFSLINWNSVVFTTPIIVIGSFVMYVFSRDVNAILTGEEVAEHLGVNTELVKKIILITGSL
VTATAVSVGGIIGFVGLIVPHISRLIVGPDNRILVPFSAISGAIFLTFADLLARIILKPMEIPIGIITAALGGPFFLYLL
IKSKQKSEGM
>Mature_329_residues
GVKKGIYFGTAFSLLVFTMILSISAGAVKIPLQEILNVFLGGGSETSRTIILNLRLPRAIESAIVGMGLSVVGTFFQGLL
RNPMADPYVLGVSSGAAFGATIAIILGLGIFGLSFMAFVTSLMTVFFVYTISKTGTRVSMTTMLLAGIAISAFMSAIISL
MMLLNHDEFSRIVFWTMGGFSLINWNSVVFTTPIIVIGSFVMYVFSRDVNAILTGEEVAEHLGVNTELVKKIILITGSLV
TATAVSVGGIIGFVGLIVPHISRLIVGPDNRILVPFSAISGAIFLTFADLLARIILKPMEIPIGIITAALGGPFFLYLLI
KSKQKSEGM

Specific function: Probably part of an ABC transporter complex. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0609

COG function: function code P; ABC-type Fe3+-siderophore transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790740, Length=306, Percent_Identity=31.3725490196078, Blast_Score=155, Evalue=4e-39,
Organism=Escherichia coli, GI1786805, Length=311, Percent_Identity=32.1543408360129, Blast_Score=150, Evalue=9e-38,
Organism=Escherichia coli, GI1790741, Length=303, Percent_Identity=31.6831683168317, Blast_Score=136, Evalue=1e-33,
Organism=Escherichia coli, GI1788004, Length=278, Percent_Identity=32.0143884892086, Blast_Score=135, Evalue=3e-33,
Organism=Escherichia coli, GI1786804, Length=317, Percent_Identity=25.2365930599369, Blast_Score=108, Evalue=4e-25,
Organism=Escherichia coli, GI1786347, Length=276, Percent_Identity=30.0724637681159, Blast_Score=100, Evalue=2e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000522 [H]

Pfam domain/function: PF01032 FecCD [H]

EC number: NA

Molecular weight: Translated: 35133; Mature: 35002

Theoretical pI: Translated: 10.07; Mature: 10.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGVKKGIYFGTAFSLLVFTMILSISAGAVKIPLQEILNVFLGGGSETSRTIILNLRLPRA
CCCCCCCHHHHHHHHHHHHHHHHCCCCCEECCHHHHHHHHHCCCCCCCCEEEEEEECCHH
IESAIVGMGLSVVGTFFQGLLRNPMADPYVLGVSSGAAFGATIAIILGLGIFGLSFMAFV
HHHHHHHCCHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHH
TSLMTVFFVYTISKTGTRVSMTTMLLAGIAISAFMSAIISLMMLLNHDEFSRIVFWTMGG
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCC
FSLINWNSVVFTTPIIVIGSFVMYVFSRDVNAILTGEEVAEHLGVNTELVKKIILITGSL
EEEEECCCHHHHHHHHHHHHHHHHHHHCCCCEEECHHHHHHHHCCCHHHHHHHHHHHCCH
VTATAVSVGGIIGFVGLIVPHISRLIVGPDNRILVPFSAISGAIFLTFADLLARIILKPM
HHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCHH
EIPIGIITAALGGPFFLYLLIKSKQKSEGM
CCCHHHHHHHHCCHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
GVKKGIYFGTAFSLLVFTMILSISAGAVKIPLQEILNVFLGGGSETSRTIILNLRLPRA
CCCCCCHHHHHHHHHHHHHHHHCCCCCEECCHHHHHHHHHCCCCCCCCEEEEEEECCHH
IESAIVGMGLSVVGTFFQGLLRNPMADPYVLGVSSGAAFGATIAIILGLGIFGLSFMAFV
HHHHHHHCCHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHH
TSLMTVFFVYTISKTGTRVSMTTMLLAGIAISAFMSAIISLMMLLNHDEFSRIVFWTMGG
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCC
FSLINWNSVVFTTPIIVIGSFVMYVFSRDVNAILTGEEVAEHLGVNTELVKKIILITGSL
EEEEECCCHHHHHHHHHHHHHHHHHHHCCCCEEECHHHHHHHHCCCHHHHHHHHHHHCCH
VTATAVSVGGIIGFVGLIVPHISRLIVGPDNRILVPFSAISGAIFLTFADLLARIILKPM
HHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCHH
EIPIGIITAALGGPFFLYLLIKSKQKSEGM
CCCHHHHHHHHCCHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; iron dicitrate [Periplasm]; H2O [C]

Specific reaction: ATP + iron dicitrate [Periplasm] + H2O = ADP + phosphate + iron dicitrate [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9639930; 9384377 [H]