| Definition | Thermoanaerobacter sp. X514 chromosome, complete genome. |
|---|---|
| Accession | NC_010320 |
| Length | 2,457,259 |
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The map label for this gene is 167040153
Identifier: 167040153
GI number: 167040153
Start: 1544155
End: 1544688
Strand: Direct
Name: 167040153
Synonym: Teth514_1515
Alternate gene names: NA
Gene position: 1544155-1544688 (Clockwise)
Preceding gene: 167040152
Following gene: 167040154
Centisome position: 62.84
GC content: 28.09
Gene sequence:
>534_bases TTGAAGGATATAAACCTCATACCAGCTGAACTAAAAGAACAAAAAATGCGAAGAAAAAAACAAATATCCCGCCTTTTTTT TGTATTTGTTTTAATCACCGTTATTTTTGCCTTAATAGCTTTTCCAATGGTATATATCAATAAATTGTATCAAGATTTAA AATACGTAGATAATGAATTAGGTAAATTTAAAGACATTTCTCAGTTACAGCAAAATGTAAAAGATTTATCTCTTTATATA GAAAAGAAGAAAAGCTTAATAGAAAAATTGCAAAGCCAAAAGCTGGATGCGGTAAATATATTAGAAGATTTAGCCTCAAA TATACCTGAAAAAGTATCTATTGATTCTTTGAAATATGAGAAAAATATTTTGGAAATAGATGGACAAGCACTTTCAGAAT CTGATATAGCAACTTTTATGCTTAACCTAAGAAGTATAAGTTATGTAGAAGATGTGAAAGTGATATCGGTGGATTTGACA GATAAAGGCCTTCTAAAATATGTTTTACAAGTAAAAATCAAGGTGGTATCATAG
Upstream 100 bases:
>100_bases TACGTGGAAAATTATTTTAGGATACCTACTTTTGTGACAGAAGCAGAAGATTATTTATACTTTTTACCTGTTTATGGATG CATTTTAAGGGGGGAATAGG
Downstream 100 bases:
>100_bases ATGAAGCTTACAAGGAGAGAAAGAGTATTAATTTACTTTGCTGTCATACTCGGATTTTTTGCACTTTATTATCAATATTA TTTAACTCCCAAAATTTTAG
Product: fimbrial assembly family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 177; Mature: 177
Protein sequence:
>177_residues MKDINLIPAELKEQKMRRKKQISRLFFVFVLITVIFALIAFPMVYINKLYQDLKYVDNELGKFKDISQLQQNVKDLSLYI EKKKSLIEKLQSQKLDAVNILEDLASNIPEKVSIDSLKYEKNILEIDGQALSESDIATFMLNLRSISYVEDVKVISVDLT DKGLLKYVLQVKIKVVS
Sequences:
>Translated_177_residues MKDINLIPAELKEQKMRRKKQISRLFFVFVLITVIFALIAFPMVYINKLYQDLKYVDNELGKFKDISQLQQNVKDLSLYI EKKKSLIEKLQSQKLDAVNILEDLASNIPEKVSIDSLKYEKNILEIDGQALSESDIATFMLNLRSISYVEDVKVISVDLT DKGLLKYVLQVKIKVVS >Mature_177_residues MKDINLIPAELKEQKMRRKKQISRLFFVFVLITVIFALIAFPMVYINKLYQDLKYVDNELGKFKDISQLQQNVKDLSLYI EKKKSLIEKLQSQKLDAVNILEDLASNIPEKVSIDSLKYEKNILEIDGQALSESDIATFMLNLRSISYVEDVKVISVDLT DKGLLKYVLQVKIKVVS
Specific function: Unknown
COG id: COG3166
COG function: function code NU; Tfp pilus assembly protein PilN
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20446; Mature: 20446
Theoretical pI: Translated: 9.42; Mature: 9.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKDINLIPAELKEQKMRRKKQISRLFFVFVLITVIFALIAFPMVYINKLYQDLKYVDNEL CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GKFKDISQLQQNVKDLSLYIEKKKSLIEKLQSQKLDAVNILEDLASNIPEKVSIDSLKYE HCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHH KNILEIDGQALSESDIATFMLNLRSISYVEDVKVISVDLTDKGLLKYVLQVKIKVVS HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKDINLIPAELKEQKMRRKKQISRLFFVFVLITVIFALIAFPMVYINKLYQDLKYVDNEL CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GKFKDISQLQQNVKDLSLYIEKKKSLIEKLQSQKLDAVNILEDLASNIPEKVSIDSLKYE HCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHH KNILEIDGQALSESDIATFMLNLRSISYVEDVKVISVDLTDKGLLKYVLQVKIKVVS HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA