| Definition | Thermoanaerobacter sp. X514 chromosome, complete genome. |
|---|---|
| Accession | NC_010320 |
| Length | 2,457,259 |
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The map label for this gene is 167040152
Identifier: 167040152
GI number: 167040152
Start: 1543194
End: 1544153
Strand: Direct
Name: 167040152
Synonym: Teth514_1514
Alternate gene names: NA
Gene position: 1543194-1544153 (Clockwise)
Preceding gene: 167040151
Following gene: 167040153
Centisome position: 62.8
GC content: 28.54
Gene sequence:
>960_bases ATGCTTGGAATTGAAATAGGAAATTTTAATACAAAATTATTAGTTGGAGAAAAAAAGAATAAATTTTTTGGTAAAAGGTT AATGATAAATACGCCTTCTAATGTGATAACTAATGGTAAAATTATTGATATAAATTCATTGGCAGATGTAATTAATGAGA CTTTGAAAAGGAACAATATCAAAGAAAAACAAGTGTGTTTTACTATTTCCAGCTCAAATAATATAATAAGGGATTTAGAA TTGCCATTAATGAAAGAAGATGAAGTCGAAAAGGCCTTATACTATGAGATTGAGCAATACATCCTTGACACTGAAAATTA TGTAATAGATTATAGATATTTACCTAATATTGCAGAGAAAAATAAAACGATTAGAGTACTGATTGCCTCTTCTCCTAAGG ATATAATAGAAAAATATGTTAAATTAGCAGAGATGTTAAAATTAAAAGTAGAAGCCATTGATATTTATAGCAATTCAATT TATAAAGCTTGTAAAAAGGTGAATTTAGCTGAAGGAATAGTAGCAGTTGTAGATATAGGGGCTGCTGTTACCAATGTGAC AGTGATTGATAGTGGTATTTATATTTTTAGCAGAAGTATAGAGTTTGGTGGCAATAGAATTACACAAATAATTGCGAATG CCTTTAATATAGATTTTCAAGCAGCAGAAGAATATAAAAGGGCAAAAAAATTTATTGGAGAAGAAAACTATAAGGATATA GAAGATACTATACTTTTATCCTTTTCGGAAGTGTTTCAACAGCTAAGCAGAATATTTGACTTTTATTATGCCACATATCA TAAAAATATACAAAAAATTATCATGTTAGGTGGTACTTCTAAGCTTTTAGGATTGAGAGACTACGTGGAAAATTATTTTA GGATACCTACTTTTGTGACAGAAGCAGAAGATTATTTATACTTTTTACCTGTTTATGGATGCATTTTAAGGGGGGAATAG
Upstream 100 bases:
>100_bases ACAAACGAGTTAGTCAGGCAATTTGAGGTAGACATAATAAAAGCCATAACAATGGCTGCTATTAAAGTGAATAACAATAA GCGCCATTAGGAGGTAAAAA
Downstream 100 bases:
>100_bases GTTGAAGGATATAAACCTCATACCAGCTGAACTAAAAGAACAAAAAATGCGAAGAAAAAAACAAATATCCCGCCTTTTTT TTGTATTTGTTTTAATCACC
Product: Tfp pilus assembly protein ATPase PilM-like protein
Products: NA
Alternate protein names: Tfp Pilus Assembly Protein ATPase PilM; Type IV Pilus Biogenesis Protein PilM; Type Iv Pilus Assembly Protein Pilm; Type 4 Fimbrial Biogenesis Protein PilM; Tfp Pilus Assembly Protein; Fimbrial Assembly Protein; Fimbrial Assembly Membrane Protein; Tfp Pilus Assembly Protein ATPase PilM-Like Protein; Type 4 Fimbrial Biogenesis Protein; Pili Assembly Protein; Protein FtsA; Type IV Fimbrial Biogenesis Protein PilM; Type IV Pilus Biogenesis ATPase PilM; PilM Type IV Pilus Assembly Protein; Tfp Pilus Assembly Protein ATPase PilM-Like Protein Protein; Fimbrial Assembly Protein PilM; Type IV Pilus Assembly Protein
Number of amino acids: Translated: 319; Mature: 319
Protein sequence:
>319_residues MLGIEIGNFNTKLLVGEKKNKFFGKRLMINTPSNVITNGKIIDINSLADVINETLKRNNIKEKQVCFTISSSNNIIRDLE LPLMKEDEVEKALYYEIEQYILDTENYVIDYRYLPNIAEKNKTIRVLIASSPKDIIEKYVKLAEMLKLKVEAIDIYSNSI YKACKKVNLAEGIVAVVDIGAAVTNVTVIDSGIYIFSRSIEFGGNRITQIIANAFNIDFQAAEEYKRAKKFIGEENYKDI EDTILLSFSEVFQQLSRIFDFYYATYHKNIQKIIMLGGTSKLLGLRDYVENYFRIPTFVTEAEDYLYFLPVYGCILRGE
Sequences:
>Translated_319_residues MLGIEIGNFNTKLLVGEKKNKFFGKRLMINTPSNVITNGKIIDINSLADVINETLKRNNIKEKQVCFTISSSNNIIRDLE LPLMKEDEVEKALYYEIEQYILDTENYVIDYRYLPNIAEKNKTIRVLIASSPKDIIEKYVKLAEMLKLKVEAIDIYSNSI YKACKKVNLAEGIVAVVDIGAAVTNVTVIDSGIYIFSRSIEFGGNRITQIIANAFNIDFQAAEEYKRAKKFIGEENYKDI EDTILLSFSEVFQQLSRIFDFYYATYHKNIQKIIMLGGTSKLLGLRDYVENYFRIPTFVTEAEDYLYFLPVYGCILRGE >Mature_319_residues MLGIEIGNFNTKLLVGEKKNKFFGKRLMINTPSNVITNGKIIDINSLADVINETLKRNNIKEKQVCFTISSSNNIIRDLE LPLMKEDEVEKALYYEIEQYILDTENYVIDYRYLPNIAEKNKTIRVLIASSPKDIIEKYVKLAEMLKLKVEAIDIYSNSI YKACKKVNLAEGIVAVVDIGAAVTNVTVIDSGIYIFSRSIEFGGNRITQIIANAFNIDFQAAEEYKRAKKFIGEENYKDI EDTILLSFSEVFQQLSRIFDFYYATYHKNIQKIIMLGGTSKLLGLRDYVENYFRIPTFVTEAEDYLYFLPVYGCILRGE
Specific function: Unknown
COG id: COG4972
COG function: function code NU; Tfp pilus assembly protein, ATPase PilM
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36641; Mature: 36641
Theoretical pI: Translated: 5.34; Mature: 5.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLGIEIGNFNTKLLVGEKKNKFFGKRLMINTPSNVITNGKIIDINSLADVINETLKRNNI CCEEEECCCCEEEEEECCCCCCCCCEEEEECCCCCCCCCEEEEHHHHHHHHHHHHHHCCC KEKQVCFTISSSNNIIRDLELPLMKEDEVEKALYYEIEQYILDTENYVIDYRYLPNIAEK CCCEEEEEEECCCCEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHC NKTIRVLIASSPKDIIEKYVKLAEMLKLKVEAIDIYSNSIYKACKKVNLAEGIVAVVDIG CCEEEEEEECCCHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHCCHHHHHEEEHHHC AAVTNVTVIDSGIYIFSRSIEFGGNRITQIIANAFNIDFQAAEEYKRAKKFIGEENYKDI HHHEEEEEEECCEEEEEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCH EDTILLSFSEVFQQLSRIFDFYYATYHKNIQKIIMLGGTSKLLGLRDYVENYFRIPTFVT HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHCCCCEEE EAEDYLYFLPVYGCILRGE CCCHHEEEEEHHCEEECCC >Mature Secondary Structure MLGIEIGNFNTKLLVGEKKNKFFGKRLMINTPSNVITNGKIIDINSLADVINETLKRNNI CCEEEECCCCEEEEEECCCCCCCCCEEEEECCCCCCCCCEEEEHHHHHHHHHHHHHHCCC KEKQVCFTISSSNNIIRDLELPLMKEDEVEKALYYEIEQYILDTENYVIDYRYLPNIAEK CCCEEEEEEECCCCEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHC NKTIRVLIASSPKDIIEKYVKLAEMLKLKVEAIDIYSNSIYKACKKVNLAEGIVAVVDIG CCEEEEEEECCCHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHCCHHHHHEEEHHHC AAVTNVTVIDSGIYIFSRSIEFGGNRITQIIANAFNIDFQAAEEYKRAKKFIGEENYKDI HHHEEEEEEECCEEEEEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCH EDTILLSFSEVFQQLSRIFDFYYATYHKNIQKIIMLGGTSKLLGLRDYVENYFRIPTFVT HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHCCCCEEE EAEDYLYFLPVYGCILRGE CCCHHEEEEEHHCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA