| Definition | Thermoanaerobacter sp. X514 chromosome, complete genome. |
|---|---|
| Accession | NC_010320 |
| Length | 2,457,259 |
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The map label for this gene is aroE [H]
Identifier: 167040141
GI number: 167040141
Start: 1534659
End: 1535513
Strand: Direct
Name: aroE [H]
Synonym: Teth514_1503
Alternate gene names: 167040141
Gene position: 1534659-1535513 (Clockwise)
Preceding gene: 167040140
Following gene: 167040142
Centisome position: 62.45
GC content: 32.28
Gene sequence:
>855_bases ATGGAGATTAATTCAAATACTAAACTGTATGGTCTTATAGGGCATCCTGTAGAACATAGTTTATCCCCTTTAATACATAA CTATGCTTTTAAGTCTTTAAATTTAAATTGTGTCTACACTGTTTTTGATGTTTTGCCAGAAAAGCTTGAAGATGCAGTAA ATGGAGTAAAAGCTTTGGGAATAAAAGGAGTTAATGTGACTGTGCCACATAAAGAGAAGATAATTAAATACTTAGATGTG GTTTCAGAAGAAGCTTTAAAAATTGGCGCAGTCAATACTGTAGTCAATGAAGAAGGAATATTAAAAGGCTATAATACGGA TGTCTATGGCTTTATAGACTCATTAACAGAAGTAGGAGAAAAAATTGAAGGAAGAAAAGCTGTTGTCTTAGGAGCTGGTG GAGCTTCTAAAGCTGTTTGTGTCGCCCTTGCTCTAAAAGGGATAGATTCGATAATAATTGCCAATAGAAGTGTTGAGAGA GCAAAAGATTTGTCAGAGTACATTAAAAAAGAATTTAAGATTCAGTGTGATTACTGCAGTATAAATGAAGTAAAAGAACT ACCAGAAATAGATATACTTGTTAATACTACAAGCGTAGGAATGTATCCAAATACAGAAGATTCTCCTGCTGATGAAAAAG TGGTTTTGAAAGCTAAATTTGTCTATGACCTTATTTACAATCCTTTTGAAACTGCTCTTTTAAAACATGCGAAAAAGAAT GGAATAAAGTATTCTAATGGACTTTCTATGTTGGTAAATCAAGCTAATTATTCTTTCAAATTATGGACAGGGGGATTTTT CGACAAAAATTTGGTATACAGGTATTTAAAAGAAGGAATTACGCATAATTTGTAG
Upstream 100 bases:
>100_bases TTATATACTATTTTGGTAAAACCTCTATCAGAAGAGGAATTAGGATGGACTAAACTTATGAGAAAAGCGGAAAAACATGT ACTTAAAAGGATTGAGAGAT
Downstream 100 bases:
>100_bases AATATTTTATAAAGAGTAGATGAAGTGAGGCTATATGTGGGCACTTTATGCCTCACGGATACAGTGGTGCAACCGGCTTT ATGTCGGCTTTATTATTTTT
Product: shikimate 5-dehydrogenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 284; Mature: 284
Protein sequence:
>284_residues MEINSNTKLYGLIGHPVEHSLSPLIHNYAFKSLNLNCVYTVFDVLPEKLEDAVNGVKALGIKGVNVTVPHKEKIIKYLDV VSEEALKIGAVNTVVNEEGILKGYNTDVYGFIDSLTEVGEKIEGRKAVVLGAGGASKAVCVALALKGIDSIIIANRSVER AKDLSEYIKKEFKIQCDYCSINEVKELPEIDILVNTTSVGMYPNTEDSPADEKVVLKAKFVYDLIYNPFETALLKHAKKN GIKYSNGLSMLVNQANYSFKLWTGGFFDKNLVYRYLKEGITHNL
Sequences:
>Translated_284_residues MEINSNTKLYGLIGHPVEHSLSPLIHNYAFKSLNLNCVYTVFDVLPEKLEDAVNGVKALGIKGVNVTVPHKEKIIKYLDV VSEEALKIGAVNTVVNEEGILKGYNTDVYGFIDSLTEVGEKIEGRKAVVLGAGGASKAVCVALALKGIDSIIIANRSVER AKDLSEYIKKEFKIQCDYCSINEVKELPEIDILVNTTSVGMYPNTEDSPADEKVVLKAKFVYDLIYNPFETALLKHAKKN GIKYSNGLSMLVNQANYSFKLWTGGFFDKNLVYRYLKEGITHNL >Mature_284_residues MEINSNTKLYGLIGHPVEHSLSPLIHNYAFKSLNLNCVYTVFDVLPEKLEDAVNGVKALGIKGVNVTVPHKEKIIKYLDV VSEEALKIGAVNTVVNEEGILKGYNTDVYGFIDSLTEVGEKIEGRKAVVLGAGGASKAVCVALALKGIDSIIIANRSVER AKDLSEYIKKEFKIQCDYCSINEVKELPEIDILVNTTSVGMYPNTEDSPADEKVVLKAKFVYDLIYNPFETALLKHAKKN GIKYSNGLSMLVNQANYSFKLWTGGFFDKNLVYRYLKEGITHNL
Specific function: Aromatic amino acids biosynthesis; shikimate pathway; fourth step. [C]
COG id: COG0169
COG function: function code E; Shikimate 5-dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the shikimate dehydrogenase family [H]
Homologues:
Organism=Escherichia coli, GI1787983, Length=286, Percent_Identity=33.9160839160839, Blast_Score=166, Evalue=1e-42, Organism=Escherichia coli, GI1789675, Length=276, Percent_Identity=34.0579710144928, Blast_Score=134, Evalue=7e-33, Organism=Saccharomyces cerevisiae, GI6320332, Length=274, Percent_Identity=32.8467153284672, Blast_Score=102, Evalue=9e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016040 - InterPro: IPR011342 - InterPro: IPR013708 - InterPro: IPR022893 - InterPro: IPR006151 [H]
Pfam domain/function: PF01488 Shikimate_DH; PF08501 Shikimate_dh_N [H]
EC number: =1.1.1.25 [H]
Molecular weight: Translated: 31444; Mature: 31444
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEINSNTKLYGLIGHPVEHSLSPLIHNYAFKSLNLNCVYTVFDVLPEKLEDAVNGVKALG CCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHC IKGVNVTVPHKEKIIKYLDVVSEEALKIGAVNTVVNEEGILKGYNTDVYGFIDSLTEVGE CCCCEEECCCHHHHHHHHHHHHHHHHHHCHHHHEECCCCCEECCCCHHHHHHHHHHHHHH KIEGRKAVVLGAGGASKAVCVALALKGIDSIIIANRSVERAKDLSEYIKKEFKIQCDYCS HCCCCEEEEEECCCCCHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHEEEECCCC INEVKELPEIDILVNTTSVGMYPNTEDSPADEKVVLKAKFVYDLIYNPFETALLKHAKKN HHHHHCCCCEEEEEEEEEECCCCCCCCCCCCCEEEEHHHHHHHHHHCHHHHHHHHHHHHC GIKYSNGLSMLVNQANYSFKLWTGGFFDKNLVYRYLKEGITHNL CCEECCCHHHEEECCCCEEEEEECCCCCHHHHHHHHHHHHCCCC >Mature Secondary Structure MEINSNTKLYGLIGHPVEHSLSPLIHNYAFKSLNLNCVYTVFDVLPEKLEDAVNGVKALG CCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHC IKGVNVTVPHKEKIIKYLDVVSEEALKIGAVNTVVNEEGILKGYNTDVYGFIDSLTEVGE CCCCEEECCCHHHHHHHHHHHHHHHHHHCHHHHEECCCCCEECCCCHHHHHHHHHHHHHH KIEGRKAVVLGAGGASKAVCVALALKGIDSIIIANRSVERAKDLSEYIKKEFKIQCDYCS HCCCCEEEEEECCCCCHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHEEEECCCC INEVKELPEIDILVNTTSVGMYPNTEDSPADEKVVLKAKFVYDLIYNPFETALLKHAKKN HHHHHCCCCEEEEEEEEEECCCCCCCCCCCCCEEEEHHHHHHHHHHCHHHHHHHHHHHHC GIKYSNGLSMLVNQANYSFKLWTGGFFDKNLVYRYLKEGITHNL CCEECCCHHHEEECCCCEEEEEECCCCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11997336 [H]