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The map label for this gene is yvrB [H]

Identifier: 167038964

GI number: 167038964

Start: 315484

End: 316476

Strand: Direct

Name: yvrB [H]

Synonym: Teth514_0297

Alternate gene names: 167038964

Gene position: 315484-316476 (Clockwise)

Preceding gene: 167038963

Following gene: 167038965

Centisome position: 12.84

GC content: 36.76

Gene sequence:

>993_bases
GTGAAATTCAAAAGAGGTATATATTTTGGTACAGCCTTTTCACTGCTTGTCTTTACCATGATTTTATCAATTTCTGCAGG
GGCGGTAAAAATACCCCTGCGGGAAATTTTAAATATTTTTTTTGGCGGTGGCAGTGAAACTTCCAGGACGATAATACTTA
ATTTAAGGCTTCCAAGGGTAATTGAATCAGCAGTTGTAGGAATGGGACTTTCAGTTGTAGGGGCGTTTTTTCAAGGGCTT
TTGAGAAATCCAATGGCAGATCCTTATGTTTTGGGTATATCATCAGGAGCGGCTTTTGGTGCTACTATTGCGATAATATT
GGGGTTTGGAATATTTGGACTGAGTTTTATGGCATTTGTTACTTCTTTAATGACTGTGTTTTTTGTGTACACTATCTCTA
GAACTAGCACAAGAGTATCCATGACCACAATGTTGCTTGCGGGAATAGCCATAAGCGCTTTTATGTCTGCAATTATTTCT
CTCATGATGCTTTTAAACCATGATGAGTTTTCTCGAATTGTTTTTTGGACTATGGGAGGATTTAGCCTCATAAATTGGAA
TAGTGTGGTCTTTTCTACTCCTATAATAGTAATTGGCTCTTTTGTGATGTATGTATTTTCAAGGGATGTAAATGCGATAT
TGACAGGAGAAGAAGTTGCAGAACATTTAGGTGTCAACACAGAATTGGTCAAAAAAATAATTCTTGTGACAGGCTCATTG
GTTACTGCAACAGCTGTGTCAGTTGGTGGAATTATAGGTTTTGTGGGACTTATTGTGCCTCATATATCAAGGCTTATTGT
AGGACCTGACAATAGAGTTTTGGTACCTTTTAGTGCAATATCAGGAGCAATATTTTTGACTTTTGCAGACCTATTAGCAC
GAGTTATTTTAAAACCAATGGAAATTCCAATTGGAATAATTACTGCGGCATTTGGAGGACCATTCTTTTTATATCTGTTA
ATAAAGAGCAAACAAAAAAGTGAAGGAATGTGA

Upstream 100 bases:

>100_bases
GTGATAAGCAATGATGACATAATATCAAGAGCTTCTAATAGAATTGTTTTAGGACTTGAAGAAATTGCAAAATTCTTACA
TCCGGAGGCATTTAAGTAAA

Downstream 100 bases:

>100_bases
TGATATGGCTATTTTACAGGTAAATAAATTACATTTTTCTTATAGGGGAAGGGAAGTTTTAAGAGGGATAGATTTCACAA
TAAATAAAAGCATAGTGATA

Product: transport system permease

Products: ADP; phosphate; iron dicitrate [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 330; Mature: 330

Protein sequence:

>330_residues
MKFKRGIYFGTAFSLLVFTMILSISAGAVKIPLREILNIFFGGGSETSRTIILNLRLPRVIESAVVGMGLSVVGAFFQGL
LRNPMADPYVLGISSGAAFGATIAIILGFGIFGLSFMAFVTSLMTVFFVYTISRTSTRVSMTTMLLAGIAISAFMSAIIS
LMMLLNHDEFSRIVFWTMGGFSLINWNSVVFSTPIIVIGSFVMYVFSRDVNAILTGEEVAEHLGVNTELVKKIILVTGSL
VTATAVSVGGIIGFVGLIVPHISRLIVGPDNRVLVPFSAISGAIFLTFADLLARVILKPMEIPIGIITAAFGGPFFLYLL
IKSKQKSEGM

Sequences:

>Translated_330_residues
MKFKRGIYFGTAFSLLVFTMILSISAGAVKIPLREILNIFFGGGSETSRTIILNLRLPRVIESAVVGMGLSVVGAFFQGL
LRNPMADPYVLGISSGAAFGATIAIILGFGIFGLSFMAFVTSLMTVFFVYTISRTSTRVSMTTMLLAGIAISAFMSAIIS
LMMLLNHDEFSRIVFWTMGGFSLINWNSVVFSTPIIVIGSFVMYVFSRDVNAILTGEEVAEHLGVNTELVKKIILVTGSL
VTATAVSVGGIIGFVGLIVPHISRLIVGPDNRVLVPFSAISGAIFLTFADLLARVILKPMEIPIGIITAAFGGPFFLYLL
IKSKQKSEGM
>Mature_330_residues
MKFKRGIYFGTAFSLLVFTMILSISAGAVKIPLREILNIFFGGGSETSRTIILNLRLPRVIESAVVGMGLSVVGAFFQGL
LRNPMADPYVLGISSGAAFGATIAIILGFGIFGLSFMAFVTSLMTVFFVYTISRTSTRVSMTTMLLAGIAISAFMSAIIS
LMMLLNHDEFSRIVFWTMGGFSLINWNSVVFSTPIIVIGSFVMYVFSRDVNAILTGEEVAEHLGVNTELVKKIILVTGSL
VTATAVSVGGIIGFVGLIVPHISRLIVGPDNRVLVPFSAISGAIFLTFADLLARVILKPMEIPIGIITAAFGGPFFLYLL
IKSKQKSEGM

Specific function: Probably part of an ABC transporter complex. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0609

COG function: function code P; ABC-type Fe3+-siderophore transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790740, Length=306, Percent_Identity=30.3921568627451, Blast_Score=155, Evalue=5e-39,
Organism=Escherichia coli, GI1786805, Length=311, Percent_Identity=32.1543408360129, Blast_Score=145, Evalue=2e-36,
Organism=Escherichia coli, GI1788004, Length=278, Percent_Identity=32.3741007194245, Blast_Score=137, Evalue=9e-34,
Organism=Escherichia coli, GI1790741, Length=281, Percent_Identity=32.7402135231317, Blast_Score=133, Evalue=2e-32,
Organism=Escherichia coli, GI1786804, Length=316, Percent_Identity=25.6329113924051, Blast_Score=110, Evalue=1e-25,
Organism=Escherichia coli, GI1786347, Length=276, Percent_Identity=30.4347826086957, Blast_Score=101, Evalue=5e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000522 [H]

Pfam domain/function: PF01032 FecCD [H]

EC number: NA

Molecular weight: Translated: 35424; Mature: 35424

Theoretical pI: Translated: 10.40; Mature: 10.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFKRGIYFGTAFSLLVFTMILSISAGAVKIPLREILNIFFGGGSETSRTIILNLRLPRV
CCCCCCCHHHHHHHHHHHHHHHHCCCCCEEECHHHHHHHHCCCCCCCCCEEEEEECCHHH
IESAVVGMGLSVVGAFFQGLLRNPMADPYVLGISSGAAFGATIAIILGFGIFGLSFMAFV
HHHHHHHCCHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHH
TSLMTVFFVYTISRTSTRVSMTTMLLAGIAISAFMSAIISLMMLLNHDEFSRIVFWTMGG
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCC
FSLINWNSVVFSTPIIVIGSFVMYVFSRDVNAILTGEEVAEHLGVNTELVKKIILVTGSL
EEEEECCCHHHHHHHHHHHHHHHHHHHCCCCEEECHHHHHHHHCCCHHHHHHHHHHHCCH
VTATAVSVGGIIGFVGLIVPHISRLIVGPDNRVLVPFSAISGAIFLTFADLLARVILKPM
HHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCHH
EIPIGIITAAFGGPFFLYLLIKSKQKSEGM
CCCHHHEEHHCCCHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MKFKRGIYFGTAFSLLVFTMILSISAGAVKIPLREILNIFFGGGSETSRTIILNLRLPRV
CCCCCCCHHHHHHHHHHHHHHHHCCCCCEEECHHHHHHHHCCCCCCCCCEEEEEECCHHH
IESAVVGMGLSVVGAFFQGLLRNPMADPYVLGISSGAAFGATIAIILGFGIFGLSFMAFV
HHHHHHHCCHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHH
TSLMTVFFVYTISRTSTRVSMTTMLLAGIAISAFMSAIISLMMLLNHDEFSRIVFWTMGG
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCC
FSLINWNSVVFSTPIIVIGSFVMYVFSRDVNAILTGEEVAEHLGVNTELVKKIILVTGSL
EEEEECCCHHHHHHHHHHHHHHHHHHHCCCCEEECHHHHHHHHCCCHHHHHHHHHHHCCH
VTATAVSVGGIIGFVGLIVPHISRLIVGPDNRVLVPFSAISGAIFLTFADLLARVILKPM
HHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCHH
EIPIGIITAAFGGPFFLYLLIKSKQKSEGM
CCCHHHEEHHCCCHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; iron dicitrate [Periplasm]; H2O [C]

Specific reaction: ATP + iron dicitrate [Periplasm] + H2O = ADP + phosphate + iron dicitrate [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9639930; 9384377 [H]