Click here to switch to the map view.

The map label for this gene is chvE [H]

Identifier: 167038895

GI number: 167038895

Start: 236301

End: 237425

Strand: Direct

Name: chvE [H]

Synonym: Teth514_0226

Alternate gene names: 167038895

Gene position: 236301-237425 (Clockwise)

Preceding gene: 167038894

Following gene: 167038896

Centisome position: 9.62

GC content: 35.56

Gene sequence:

>1125_bases
ATGAGTAACAAGCGCAGACTTATAGTAGTAGTAATAGCATTCCTATTGTTAGTATCTGCTTTTCTTGGTGGTTGTTCTTC
TTCCTCAAAGCAAACTTCTGAGAAAAAACAATTGGCTGTTGGTATTGTATTACCGACAAAAGATGAACCCAGATGGATTC
AAGATGAGACCCGCTTTCAGGATGCATTAAAGAATACCCCTTATTCTGCTGAAATTCTTTTCAGCCAAGGTGACCCTGCT
AAAGAAAAAGCTAATGTAGAAACTTTGCTAAGTAAAGGTATAAAAGTGCTTATTTTGTGCCCTCACGATGCAAATGCGGC
AGCAGCTTCTGCAGAGGCAGCTAAAAAAGCAGGTGTAAAGGTTATATCTTATGACAGATTAATACTTAACACAGATGCAG
TAGATTATTATGTCACTTTTGATAGTGTACAGGTAGGTAAAGAACAAGGACAATATTTAGTTGATCATGCAACAGGTAAA
GGCAATCCTTTATATCTCTATGCTGGTGCTTTATCTGATAACAACTCTTTCTTATTCTTCCAAGGAGCATGGGAAGTTTT
ACAGCCAAAGATCGCTGATGGCACTTTTGTAATTGCAAATTCTGACAAAGCAGTTGCATTAAAAGATAAAAAAGATTTAA
CTCGTGATGAAATGGCAAGTATTATAGGACAAATTACTACAAATTGGGATTTCAATACTGCTAAAAACCTTGCTCAGGCA
AACCTTGCTAAGGCGCCAAAAAATTTAAAGGGTAATGTATTTATACTTGCTCCTAATGACGGTACTGCAAGGTCAATAGC
AGATACTTTTAAGGCAGATCCGGACATCAAAAGTTATGTAATTACTGGACAAGATGCTGAAAAACCATCCATTCAATACA
TTATTGATGGAAAACAATCCATGACTGTCTTCAAAGATGTTAGGATTCTTGTTAAGGATGCAATAAATGCTGCTTTGACA
TATTTAGACGGAAAAACACCAGAATCTACAAAAACTTATAATAATGGTGTAAAAGATGTTCCTTCTAAACCATCTCCTGT
ACAAGTAGTAGATAAGAATAATGTAAAACAAGCCTTAATAGATTCGGGATATTACAAAGAAAGCGATTTTACTTGGCCTA
AATAA

Upstream 100 bases:

>100_bases
AAAAAAGTAAAGGATAACAAAAAAAGTTCCAGAGGCAATTTGAGGGGGGAGGTAGAATTAATTATTAAAATAAAATTTTA
GAAAGGAGAGGTAATGTACA

Downstream 100 bases:

>100_bases
TGTTGGAGGTGTAGAGAATGGGTACCCCGCTTATAGAGCTTGTAAACGTAAGTAAAAGTTTTTCAGGTGTACAAGTATTA
TTTGGTGTAAATTTTAAAGT

Product: xylose ABC transporter periplasmic protein-like protein

Products: ADP; phosphate; xylose [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 374; Mature: 373

Protein sequence:

>374_residues
MSNKRRLIVVVIAFLLLVSAFLGGCSSSSKQTSEKKQLAVGIVLPTKDEPRWIQDETRFQDALKNTPYSAEILFSQGDPA
KEKANVETLLSKGIKVLILCPHDANAAAASAEAAKKAGVKVISYDRLILNTDAVDYYVTFDSVQVGKEQGQYLVDHATGK
GNPLYLYAGALSDNNSFLFFQGAWEVLQPKIADGTFVIANSDKAVALKDKKDLTRDEMASIIGQITTNWDFNTAKNLAQA
NLAKAPKNLKGNVFILAPNDGTARSIADTFKADPDIKSYVITGQDAEKPSIQYIIDGKQSMTVFKDVRILVKDAINAALT
YLDGKTPESTKTYNNGVKDVPSKPSPVQVVDKNNVKQALIDSGYYKESDFTWPK

Sequences:

>Translated_374_residues
MSNKRRLIVVVIAFLLLVSAFLGGCSSSSKQTSEKKQLAVGIVLPTKDEPRWIQDETRFQDALKNTPYSAEILFSQGDPA
KEKANVETLLSKGIKVLILCPHDANAAAASAEAAKKAGVKVISYDRLILNTDAVDYYVTFDSVQVGKEQGQYLVDHATGK
GNPLYLYAGALSDNNSFLFFQGAWEVLQPKIADGTFVIANSDKAVALKDKKDLTRDEMASIIGQITTNWDFNTAKNLAQA
NLAKAPKNLKGNVFILAPNDGTARSIADTFKADPDIKSYVITGQDAEKPSIQYIIDGKQSMTVFKDVRILVKDAINAALT
YLDGKTPESTKTYNNGVKDVPSKPSPVQVVDKNNVKQALIDSGYYKESDFTWPK
>Mature_373_residues
SNKRRLIVVVIAFLLLVSAFLGGCSSSSKQTSEKKQLAVGIVLPTKDEPRWIQDETRFQDALKNTPYSAEILFSQGDPAK
EKANVETLLSKGIKVLILCPHDANAAAASAEAAKKAGVKVISYDRLILNTDAVDYYVTFDSVQVGKEQGQYLVDHATGKG
NPLYLYAGALSDNNSFLFFQGAWEVLQPKIADGTFVIANSDKAVALKDKKDLTRDEMASIIGQITTNWDFNTAKNLAQAN
LAKAPKNLKGNVFILAPNDGTARSIADTFKADPDIKSYVITGQDAEKPSIQYIIDGKQSMTVFKDVRILVKDAINAALTY
LDGKTPESTKTYNNGVKDVPSKPSPVQVVDKNNVKQALIDSGYYKESDFTWPK

Specific function: Required for effective transcriptional induction of the vir genes by monosaccharides in response to plant signals and for normal growth and chemotaxis towards certain sugars. Function as a periplasmic multiple sugar-binding receptor protein. It does not i

COG id: COG4213

COG function: function code G; ABC-type xylose transport system, periplasmic component

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 2 family [H]

Homologues:

Organism=Escherichia coli, GI1789990, Length=340, Percent_Identity=27.9411764705882, Blast_Score=140, Evalue=9e-35,

Paralogues:

None

Copy number: 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 100 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001761 [H]

Pfam domain/function: PF00532 Peripla_BP_1 [H]

EC number: NA

Molecular weight: Translated: 40827; Mature: 40696

Theoretical pI: Translated: 8.82; Mature: 8.82

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNKRRLIVVVIAFLLLVSAFLGGCSSSSKQTSEKKQLAVGIVLPTKDEPRWIQDETRFQ
CCCCCEEHHHHHHHHHHHHHHHCCCCCCCHHCCCCCEEEEEEEEECCCCCCCCCHHHHHH
DALKNTPYSAEILFSQGDPAKEKANVETLLSKGIKVLILCPHDANAAAASAEAAKKAGVK
HHHHCCCCEEEEEEECCCCCHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHCCCE
VISYDRLILNTDAVDYYVTFDSVQVGKEQGQYLVDHATGKGNPLYLYAGALSDNNSFLFF
EEEECEEEEECCCEEEEEEECCEEECHHCCCEEEEECCCCCCEEEEEEEEECCCCCEEEE
QGAWEVLQPKIADGTFVIANSDKAVALKDKKDLTRDEMASIIGQITTNWDFNTAKNLAQA
CCCHHHHCCCCCCCEEEEECCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHH
NLAKAPKNLKGNVFILAPNDGTARSIADTFKADPDIKSYVITGQDAEKPSIQYIIDGKQS
HHHHCCCCCCCCEEEEECCCCCHHHHHHHHCCCCCCCEEEEECCCCCCCCEEEEECCCCH
MTVFKDVRILVKDAINAALTYLDGKTPESTKTYNNGVKDVPSKPSPVQVVDKNNVKQALI
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCCCCCCCCCEEEECCCCHHHHHH
DSGYYKESDFTWPK
CCCCEECCCCCCCC
>Mature Secondary Structure 
SNKRRLIVVVIAFLLLVSAFLGGCSSSSKQTSEKKQLAVGIVLPTKDEPRWIQDETRFQ
CCCCEEHHHHHHHHHHHHHHHCCCCCCCHHCCCCCEEEEEEEEECCCCCCCCCHHHHHH
DALKNTPYSAEILFSQGDPAKEKANVETLLSKGIKVLILCPHDANAAAASAEAAKKAGVK
HHHHCCCCEEEEEEECCCCCHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHCCCE
VISYDRLILNTDAVDYYVTFDSVQVGKEQGQYLVDHATGKGNPLYLYAGALSDNNSFLFF
EEEECEEEEECCCEEEEEEECCEEECHHCCCEEEEECCCCCCEEEEEEEEECCCCCEEEE
QGAWEVLQPKIADGTFVIANSDKAVALKDKKDLTRDEMASIIGQITTNWDFNTAKNLAQA
CCCHHHHCCCCCCCEEEEECCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHH
NLAKAPKNLKGNVFILAPNDGTARSIADTFKADPDIKSYVITGQDAEKPSIQYIIDGKQS
HHHHCCCCCCCCEEEEECCCCCHHHHHHHHCCCCCCCEEEEECCCCCCCCEEEEECCCCH
MTVFKDVRILVKDAINAALTYLDGKTPESTKTYNNGVKDVPSKPSPVQVVDKNNVKQALI
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCCCCCCCCCEEEECCCCHHHHHH
DSGYYKESDFTWPK
CCCCEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; xylose [Periplasm]; H2O [C]

Specific reaction: ATP + xylose [Periplasm] + H2O = ADP + phosphate + xylose [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8253785; 2156804; 11743193; 11743194 [H]