| Definition | Thermoanaerobacter sp. X514 chromosome, complete genome. |
|---|---|
| Accession | NC_010320 |
| Length | 2,457,259 |
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The map label for this gene is nagA [H]
Identifier: 167038854
GI number: 167038854
Start: 186757
End: 187905
Strand: Direct
Name: nagA [H]
Synonym: Teth514_0184
Alternate gene names: 167038854
Gene position: 186757-187905 (Clockwise)
Preceding gene: 167038853
Following gene: 167038857
Centisome position: 7.6
GC content: 34.73
Gene sequence:
>1149_bases ATGAAAAACCTTTTATTAAAACATGGTGAAATATATACACAGAATGAGATAATATATAATGGAGATTTATTAATTTCTAA TGGGAAAATTTCAAGTATAGGTAAAAATTTAAGTACTAATGATGCAGAAGTAATTGATTTAAAAGGCAAAAAAATAGTGC CTGGCTTTATAGACATACATATTCACGGCGGTGTTGGACATGATACAATGGATGCTACTTATGAAGCATTAAATGCTATT TCAATTCATCTTGCAAAACATGGAGTAACTTCTTTTTGCGCTACTACTATGACAATGGATGTACCCTATATCCTGAATGC TCTTAAAAACATAAATGAGACGATGAAAAAAGGAACAGGTGGAGCACAAATTTTAGGGGCATATGTTGAGGGACCCTTTA TAAGCAAAGAACACAAAGGGGCACAGGATGAAAAATATATAATACAACCTGATAAAGAGTTATTTGACAAATTTTTAGAA GTTTCAGGAGATAACATAAAAGTAGTAGCATTAGCACCTGAAAAAGACCCGGATGGAAGCTTTGTAGAACATGTCACTAA AAAGGGTGTAAAAGTCTCCTTAGGGCATACAAATGCCACTTATGAGGAGATGAAAAATGGAGTAGATCATGGTGCTACAA TTGCAGTTCACACTTATAACGGCATGAAAGGGTTACATCACAGAGAACCTGGTGCATTAGGAGAAGTATTTTTAGATGAC AGAATATACAGTGAGGTAATATCGGATTTTATTCACACACATCCCGCTTCAGTAAAGATATTAATTAAAATAAAAGGAAC AGACAAAGTGATACTTATATCAGATGCGATGCCTGCCTGTGGATTAGGAGACGGGGAGTACATATTTGGAGGGCAAAAGG TACTTGTAAAAGAAGGTGTGGCAAAACTAGAAAACGGTTCATTAGCAGGAAGTACATTGACGTTAGATAAAGCTTTAGCA AATATAACATTTCTTGGAGTACCGCTTTTTGAAGCTTGCAAGATGGCCTCTTTAAATCCTGCCAAAGCAATTGGAGTAGA TAATAGAAAAGGAAGCATAAAAGTTGGCAAAGATGCAGATATAGTTGTGCTAAACAATGATTTGACTGTTTATATGACGA TAATAGAGGGGAAGGTTTTTAAAGAATAA
Upstream 100 bases:
>100_bases ATTTTTATTCAAGACTGGGGTGCAAAATTTGGAAAAAATACACAGTGTATAAAAAGAATTGAAATAAAAGACAAGTTGTT ATTGGAAGGAAGTGATTTGC
Downstream 100 bases:
>100_bases AGTAAATTAATATAAAAATGCTCACAAAAAAACTGATAAATAAATGCCAAGAAGCTTAATTGCCATACAAAGTTTAAGGA ATCCTTTCGATGTAAGGATT
Product: N-acetylglucosamine-6-phosphate deacetylase
Products: NA
Alternate protein names: GlcNAc 6-P deacetylase [H]
Number of amino acids: Translated: 382; Mature: 382
Protein sequence:
>382_residues MKNLLLKHGEIYTQNEIIYNGDLLISNGKISSIGKNLSTNDAEVIDLKGKKIVPGFIDIHIHGGVGHDTMDATYEALNAI SIHLAKHGVTSFCATTMTMDVPYILNALKNINETMKKGTGGAQILGAYVEGPFISKEHKGAQDEKYIIQPDKELFDKFLE VSGDNIKVVALAPEKDPDGSFVEHVTKKGVKVSLGHTNATYEEMKNGVDHGATIAVHTYNGMKGLHHREPGALGEVFLDD RIYSEVISDFIHTHPASVKILIKIKGTDKVILISDAMPACGLGDGEYIFGGQKVLVKEGVAKLENGSLAGSTLTLDKALA NITFLGVPLFEACKMASLNPAKAIGVDNRKGSIKVGKDADIVVLNNDLTVYMTIIEGKVFKE
Sequences:
>Translated_382_residues MKNLLLKHGEIYTQNEIIYNGDLLISNGKISSIGKNLSTNDAEVIDLKGKKIVPGFIDIHIHGGVGHDTMDATYEALNAI SIHLAKHGVTSFCATTMTMDVPYILNALKNINETMKKGTGGAQILGAYVEGPFISKEHKGAQDEKYIIQPDKELFDKFLE VSGDNIKVVALAPEKDPDGSFVEHVTKKGVKVSLGHTNATYEEMKNGVDHGATIAVHTYNGMKGLHHREPGALGEVFLDD RIYSEVISDFIHTHPASVKILIKIKGTDKVILISDAMPACGLGDGEYIFGGQKVLVKEGVAKLENGSLAGSTLTLDKALA NITFLGVPLFEACKMASLNPAKAIGVDNRKGSIKVGKDADIVVLNNDLTVYMTIIEGKVFKE >Mature_382_residues MKNLLLKHGEIYTQNEIIYNGDLLISNGKISSIGKNLSTNDAEVIDLKGKKIVPGFIDIHIHGGVGHDTMDATYEALNAI SIHLAKHGVTSFCATTMTMDVPYILNALKNINETMKKGTGGAQILGAYVEGPFISKEHKGAQDEKYIIQPDKELFDKFLE VSGDNIKVVALAPEKDPDGSFVEHVTKKGVKVSLGHTNATYEEMKNGVDHGATIAVHTYNGMKGLHHREPGALGEVFLDD RIYSEVISDFIHTHPASVKILIKIKGTDKVILISDAMPACGLGDGEYIFGGQKVLVKEGVAKLENGSLAGSTLTLDKALA NITFLGVPLFEACKMASLNPAKAIGVDNRKGSIKVGKDADIVVLNNDLTVYMTIIEGKVFKE
Specific function: N-acetylglucosamine utilization. [C]
COG id: COG1820
COG function: function code G; N-acetylglucosamine-6-phosphate deacetylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nagA family [H]
Homologues:
Organism=Homo sapiens, GI224922791, Length=421, Percent_Identity=31.1163895486936, Blast_Score=187, Evalue=2e-47, Organism=Homo sapiens, GI21361513, Length=423, Percent_Identity=30.7328605200946, Blast_Score=186, Evalue=3e-47, Organism=Escherichia coli, GI1786892, Length=378, Percent_Identity=32.8042328042328, Blast_Score=191, Evalue=5e-50, Organism=Caenorhabditis elegans, GI17553768, Length=350, Percent_Identity=32.2857142857143, Blast_Score=169, Evalue=3e-42, Organism=Drosophila melanogaster, GI19920392, Length=379, Percent_Identity=33.245382585752, Blast_Score=182, Evalue=2e-46, Organism=Drosophila melanogaster, GI281361140, Length=392, Percent_Identity=31.6326530612245, Blast_Score=177, Evalue=1e-44,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006680 - InterPro: IPR003764 - InterPro: IPR011059 [H]
Pfam domain/function: PF01979 Amidohydro_1 [H]
EC number: =3.5.1.25 [H]
Molecular weight: Translated: 41182; Mature: 41182
Theoretical pI: Translated: 6.57; Mature: 6.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNLLLKHGEIYTQNEIIYNGDLLISNGKISSIGKNLSTNDAEVIDLKGKKIVPGFIDIH CCCCEECCCCEEECCEEEECCCEEEECCCHHHHCCCCCCCCCEEEEECCCEECCCEEEEE IHGGVGHDTMDATYEALNAISIHLAKHGVTSFCATTMTMDVPYILNALKNINETMKKGTG EECCCCCCHHHHHHHHHHHEEEEEHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCC GAQILGAYVEGPFISKEHKGAQDEKYIIQPDKELFDKFLEVSGDNIKVVALAPEKDPDGS CHHEEEEECCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHCCCCCEEEEEECCCCCCCCH FVEHVTKKGVKVSLGHTNATYEEMKNGVDHGATIAVHTYNGMKGLHHREPGALGEVFLDD HHHHHHHCCCEEEECCCCCHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCHHHEEHH RIYSEVISDFIHTHPASVKILIKIKGTDKVILISDAMPACGLGDGEYIFGGQKVLVKEGV HHHHHHHHHHHHCCCCCEEEEEEECCCCEEEEEECCCCCCCCCCCCEEECCCEEEEHHHH AKLENGSLAGSTLTLDKALANITFLGVPLFEACKMASLNPAKAIGVDNRKGSIKVGKDAD HHCCCCCCCCCEEEHHHHHHCEEEECCCHHHHHCCCCCCCHHEECCCCCCCCEEECCCCC IVVLNNDLTVYMTIIEGKVFKE EEEECCCCEEEEEEECCEEECC >Mature Secondary Structure MKNLLLKHGEIYTQNEIIYNGDLLISNGKISSIGKNLSTNDAEVIDLKGKKIVPGFIDIH CCCCEECCCCEEECCEEEECCCEEEECCCHHHHCCCCCCCCCEEEEECCCEECCCEEEEE IHGGVGHDTMDATYEALNAISIHLAKHGVTSFCATTMTMDVPYILNALKNINETMKKGTG EECCCCCCHHHHHHHHHHHEEEEEHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCC GAQILGAYVEGPFISKEHKGAQDEKYIIQPDKELFDKFLEVSGDNIKVVALAPEKDPDGS CHHEEEEECCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHCCCCCEEEEEECCCCCCCCH FVEHVTKKGVKVSLGHTNATYEEMKNGVDHGATIAVHTYNGMKGLHHREPGALGEVFLDD HHHHHHHCCCEEEECCCCCHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCHHHEEHH RIYSEVISDFIHTHPASVKILIKIKGTDKVILISDAMPACGLGDGEYIFGGQKVLVKEGV HHHHHHHHHHHHCCCCCEEEEEEECCCCEEEEEECCCCCCCCCCCCEEECCCEEEEHHHH AKLENGSLAGSTLTLDKALANITFLGVPLFEACKMASLNPAKAIGVDNRKGSIKVGKDAD HHCCCCCCCCCEEEHHHHHHCEEEECCCHHHHHCCCCCCCHHEECCCCCCCCEEECCCCC IVVLNNDLTVYMTIIEGKVFKE EEEECCCCEEEEEEECCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA