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The map label for this gene is ybbF [H]

Identifier: 167038840

GI number: 167038840

Start: 171527

End: 172957

Strand: Direct

Name: ybbF [H]

Synonym: Teth514_0170

Alternate gene names: 167038840

Gene position: 171527-172957 (Clockwise)

Preceding gene: 167038839

Following gene: 167038841

Centisome position: 6.98

GC content: 35.64

Gene sequence:

>1431_bases
ATGTTTAATTATCATTATCCTTTAAATATTAAATTGAGGATAGGGGGATTAAGAATGTCAAGAGAAAAAGAAATAGCTCA
AGGAATTATTAAAGAGTTAGGCGGAAAAGAGAATGTTATATCAATCACGAACTGCATGACAAGATTAAGGATACTTGTCA
AGGATTATGACAAGGTTAACAGGGAAGCTTTGGGGAAAATTGACGGTGTTATTAAAGTCAATGAAGAGGGTGGAGAGTTA
CAAGTTATTGTAGGACCTGGTCTTGCTAACAAGGTAGAAAGTGAGGCATCAAAAATACTAGGTGGTACTAAAGTTGGAAA
AGCAGAAGAAGTTAAAGCGGCAATTAGTGCCAAAAACCAAACACCTTTTAAACTTCTCTTGAGAAGGATTGCTAGTATAT
TTATTCCTTTGATTCCAGGTTTAATTGGTGGTGGTTTAATACTTGGCATTACCAATGTTGCGACAAAATTTAATTGGATT
GCAGACAAAAATTTATTGGCTATGTTAAGTTTGTTAGGCAGTACTATTTTTACGTATATGGGTATTATGGTAGGTATGAA
TACTGCTAAAGAATTTGGAGGTTCTCCTACAATTGGAGGTATTCTTGCTGGTATTATTTATAACCCTGCATTAGCTAATA
TTACAATTGGAGGGAAAGCTTTAGTCGTAGGTAGAGGCGGAATTATTTCTGTTTTAATTGCAGCAGCATTTGCAAGTTGG
CTTGAGAAAAACATTAGGAAAAGAATGCCTAACAGTATAGAATTGCTTGCAACTCCTTTGCTTACAATTTTGATAGCAGG
TTTTGCAACTTTATATGTATTACAACCTTTAGGCGGATATATAGCTGATGGTATTGGCAAAGCAGTAACTGTTGCAATTG
CAGGAAAAGCTGGTGTATTTACAGGATTTATACTTGCTGGTACATTTTTACCATTAGTTATGACAGGTTTGCATCAGGGT
TTGACACCTATCCATGTGCAATTAATTGAGTCGACAGGAGTTACTATATTACTTCCTATTTTAGCGATGGCGGGAGCAGG
TCAAGTTGGAGCTGCATTAGCAGTATATGTGAAGACCAAGAGCAAACAACTTAAAAAAATTATAGAAGGCTCAATACTTG
TCGGTATTCTCGGTATTGGAGAACCATTGATTTACGGTGTTACTTTACCACTTGGGAGACCTTTTATAGGGGCATGTATA
GGAGGTGCTTTTGGTGGAGCTTTTGAAGCCCTTAAAGTAGTTGGTGCAAGAGGATTGGGTATCTCCGGTGTACCATTAGC
TGTATTAATTGAGCCAAATAAAATTATTTATTATGTTTTAGGATTATTGATATCGTATACTGCAGGATTTATAGCTACCT
ATCTATTAGGATTTGAAGATCCAGTTGATGAAGAAATAGAAAATTCACAACCATTTACTTTTAATGTTTGA

Upstream 100 bases:

>100_bases
ATTTAATTTACTTCAATATGAAATAAATTTTCATAAATACTTTATATTTATGAAACAATATAACATATAAGGAGGTGGGA
GATAGGTATATAAGATTCAT

Downstream 100 bases:

>100_bases
TACAATTAAAAAGGGGCGTTTTGCCCCTTTTTAGGAGGAGATGATGAGGTGGCTGTTGGTATTTCGGTTTATACTACAGA
AGACTTTCCACATCAAAAGA

Product: phosphotransferase system, EIIC

Products: NA

Alternate protein names: Phosphotransferase enzyme IIB component; PTS system EIIB component; Permease IIC component; PTS system EIIC component [H]

Number of amino acids: Translated: 476; Mature: 476

Protein sequence:

>476_residues
MFNYHYPLNIKLRIGGLRMSREKEIAQGIIKELGGKENVISITNCMTRLRILVKDYDKVNREALGKIDGVIKVNEEGGEL
QVIVGPGLANKVESEASKILGGTKVGKAEEVKAAISAKNQTPFKLLLRRIASIFIPLIPGLIGGGLILGITNVATKFNWI
ADKNLLAMLSLLGSTIFTYMGIMVGMNTAKEFGGSPTIGGILAGIIYNPALANITIGGKALVVGRGGIISVLIAAAFASW
LEKNIRKRMPNSIELLATPLLTILIAGFATLYVLQPLGGYIADGIGKAVTVAIAGKAGVFTGFILAGTFLPLVMTGLHQG
LTPIHVQLIESTGVTILLPILAMAGAGQVGAALAVYVKTKSKQLKKIIEGSILVGILGIGEPLIYGVTLPLGRPFIGACI
GGAFGGAFEALKVVGARGLGISGVPLAVLIEPNKIIYYVLGLLISYTAGFIATYLLGFEDPVDEEIENSQPFTFNV

Sequences:

>Translated_476_residues
MFNYHYPLNIKLRIGGLRMSREKEIAQGIIKELGGKENVISITNCMTRLRILVKDYDKVNREALGKIDGVIKVNEEGGEL
QVIVGPGLANKVESEASKILGGTKVGKAEEVKAAISAKNQTPFKLLLRRIASIFIPLIPGLIGGGLILGITNVATKFNWI
ADKNLLAMLSLLGSTIFTYMGIMVGMNTAKEFGGSPTIGGILAGIIYNPALANITIGGKALVVGRGGIISVLIAAAFASW
LEKNIRKRMPNSIELLATPLLTILIAGFATLYVLQPLGGYIADGIGKAVTVAIAGKAGVFTGFILAGTFLPLVMTGLHQG
LTPIHVQLIESTGVTILLPILAMAGAGQVGAALAVYVKTKSKQLKKIIEGSILVGILGIGEPLIYGVTLPLGRPFIGACI
GGAFGGAFEALKVVGARGLGISGVPLAVLIEPNKIIYYVLGLLISYTAGFIATYLLGFEDPVDEEIENSQPFTFNV
>Mature_476_residues
MFNYHYPLNIKLRIGGLRMSREKEIAQGIIKELGGKENVISITNCMTRLRILVKDYDKVNREALGKIDGVIKVNEEGGEL
QVIVGPGLANKVESEASKILGGTKVGKAEEVKAAISAKNQTPFKLLLRRIASIFIPLIPGLIGGGLILGITNVATKFNWI
ADKNLLAMLSLLGSTIFTYMGIMVGMNTAKEFGGSPTIGGILAGIIYNPALANITIGGKALVVGRGGIISVLIAAAFASW
LEKNIRKRMPNSIELLATPLLTILIAGFATLYVLQPLGGYIADGIGKAVTVAIAGKAGVFTGFILAGTFLPLVMTGLHQG
LTPIHVQLIESTGVTILLPILAMAGAGQVGAALAVYVKTKSKQLKKIIEGSILVGILGIGEPLIYGVTLPLGRPFIGACI
GGAFGGAFEALKVVGARGLGISGVPLAVLIEPNKIIYYVLGLLISYTAGFIATYLLGFEDPVDEEIENSQPFTFNV

Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PTS EIIC type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788769, Length=476, Percent_Identity=36.7647058823529, Blast_Score=242, Evalue=3e-65,
Organism=Escherichia coli, GI1790159, Length=459, Percent_Identity=30.0653594771242, Blast_Score=177, Evalue=1e-45,
Organism=Escherichia coli, GI2367362, Length=428, Percent_Identity=26.8691588785047, Blast_Score=160, Evalue=1e-40,
Organism=Escherichia coli, GI48994906, Length=487, Percent_Identity=27.5154004106776, Blast_Score=145, Evalue=7e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018113
- InterPro:   IPR001996
- InterPro:   IPR003352
- InterPro:   IPR013013 [H]

Pfam domain/function: PF00367 PTS_EIIB; PF02378 PTS_EIIC [H]

EC number: =2.7.1.69 [H]

Molecular weight: Translated: 50003; Mature: 50003

Theoretical pI: Translated: 9.95; Mature: 9.95

Prosite motif: PS01035 PTS_EIIB_TYPE_1_CYS ; PS51098 PTS_EIIB_TYPE_1 ; PS51103 PTS_EIIC_TYPE_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFNYHYPLNIKLRIGGLRMSREKEIAQGIIKELGGKENVISITNCMTRLRILVKDYDKVN
CCCEEEEEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHH
REALGKIDGVIKVNEEGGELQVIVGPGLANKVESEASKILGGTKVGKAEEVKAAISAKNQ
HHHHHCCCCEEEECCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCC
TPFKLLLRRIASIFIPLIPGLIGGGLILGITNVATKFNWIADKNLLAMLSLLGSTIFTYM
CHHHHHHHHHHHHHHHHHHHHHCCHHHEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
GIMVGMNTAKEFGGSPTIGGILAGIIYNPALANITIGGKALVVGRGGIISVLIAAAFASW
HHHHCCCHHHHCCCCCCHHHHHHHHHHCCCCEEEEECCEEEEEECCHHHHHHHHHHHHHH
LEKNIRKRMPNSIELLATPLLTILIAGFATLYVLQPLGGYIADGIGKAVTVAIAGKAGVF
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHH
TGFILAGTFLPLVMTGLHQGLTPIHVQLIESTGVTILLPILAMAGAGQVGAALAVYVKTK
HHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCEEEEEEECH
SKQLKKIIEGSILVGILGIGEPLIYGVTLPLGRPFIGACIGGAFGGAFEALKVVGARGLG
HHHHHHHHCCCCEEEEECCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
ISGVPLAVLIEPNKIIYYVLGLLISYTAGFIATYLLGFEDPVDEEIENSQPFTFNV
CCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCEEECC
>Mature Secondary Structure
MFNYHYPLNIKLRIGGLRMSREKEIAQGIIKELGGKENVISITNCMTRLRILVKDYDKVN
CCCEEEEEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHH
REALGKIDGVIKVNEEGGELQVIVGPGLANKVESEASKILGGTKVGKAEEVKAAISAKNQ
HHHHHCCCCEEEECCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCC
TPFKLLLRRIASIFIPLIPGLIGGGLILGITNVATKFNWIADKNLLAMLSLLGSTIFTYM
CHHHHHHHHHHHHHHHHHHHHHCCHHHEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
GIMVGMNTAKEFGGSPTIGGILAGIIYNPALANITIGGKALVVGRGGIISVLIAAAFASW
HHHHCCCHHHHCCCCCCHHHHHHHHHHCCCCEEEEECCEEEEEECCHHHHHHHHHHHHHH
LEKNIRKRMPNSIELLATPLLTILIAGFATLYVLQPLGGYIADGIGKAVTVAIAGKAGVF
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHH
TGFILAGTFLPLVMTGLHQGLTPIHVQLIESTGVTILLPILAMAGAGQVGAALAVYVKTK
HHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCEEEEEEECH
SKQLKKIIEGSILVGILGIGEPLIYGVTLPLGRPFIGACIGGAFGGAFEALKVVGARGLG
HHHHHHHHCCCCEEEEECCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
ISGVPLAVLIEPNKIIYYVLGLLISYTAGFIATYLLGFEDPVDEEIENSQPFTFNV
CCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]