Definition | Thermoanaerobacter sp. X514 chromosome, complete genome. |
---|---|
Accession | NC_010320 |
Length | 2,457,259 |
Click here to switch to the map view.
The map label for this gene is 167038785
Identifier: 167038785
GI number: 167038785
Start: 108856
End: 109191
Strand: Direct
Name: 167038785
Synonym: Teth514_0112
Alternate gene names: NA
Gene position: 108856-109191 (Clockwise)
Preceding gene: 167038784
Following gene: 167038786
Centisome position: 4.43
GC content: 31.85
Gene sequence:
>336_bases ATGGAAATAAATCCTATAAGTAATAATGCTGTAAATAAACTGCAAATTGATTTGCGAAAAGATGGAAGTGATTTTGAACG AATAATACAACAGGCAATAAAAGACAAAGACAAGCAAAAACTTAAAGAAGTATGTCAGCAATTAGAGGCGACTTTTATAG GGCTTATGTTAAATGAGATGAGAAAGACAATTCCAGAAGATTCATTGACCGGAAATAGCCTGGCGAAGGATATTTTTACT TCTATGTTATATGATAAATATGCTGAAATGTTGGCTCAAAATGGATCTTTTGGACTGGCTGACCAAATATATAATCAACT TTCTAAGAAAGTGTAA
Upstream 100 bases:
>100_bases GCTTATGAGATAAATTCAAAGGCTATACAAGCAGCTGATGAAATGCTGGGAATTGCAAATAATCTGAGAAGATAGTTATA ATTGAAAGGAATGACATTGC
Downstream 100 bases:
>100_bases AAGGGCGCTTGCCCTTTTTACAGTTTGTTGACAAAGTTAAAAAATATTCAAAGGAGATATTTTGCATCGTCGCTCCGATG TTCCAAAGCGACAAAACTAA
Product: rod binding protein-like protein
Products: NA
Alternate protein names: Flagellum-Specific Muramidase
Number of amino acids: Translated: 111; Mature: 111
Protein sequence:
>111_residues MEINPISNNAVNKLQIDLRKDGSDFERIIQQAIKDKDKQKLKEVCQQLEATFIGLMLNEMRKTIPEDSLTGNSLAKDIFT SMLYDKYAEMLAQNGSFGLADQIYNQLSKKV
Sequences:
>Translated_111_residues MEINPISNNAVNKLQIDLRKDGSDFERIIQQAIKDKDKQKLKEVCQQLEATFIGLMLNEMRKTIPEDSLTGNSLAKDIFT SMLYDKYAEMLAQNGSFGLADQIYNQLSKKV >Mature_111_residues MEINPISNNAVNKLQIDLRKDGSDFERIIQQAIKDKDKQKLKEVCQQLEATFIGLMLNEMRKTIPEDSLTGNSLAKDIFT SMLYDKYAEMLAQNGSFGLADQIYNQLSKKV
Specific function: Unknown
COG id: COG3951
COG function: function code MNO; Rod binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.2.1.-
Molecular weight: Translated: 12646; Mature: 12646
Theoretical pI: Translated: 5.19; Mature: 5.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEINPISNNAVNKLQIDLRKDGSDFERIIQQAIKDKDKQKLKEVCQQLEATFIGLMLNEM CCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH RKTIPEDSLTGNSLAKDIFTSMLYDKYAEMLAQNGSFGLADQIYNQLSKKV HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCC >Mature Secondary Structure MEINPISNNAVNKLQIDLRKDGSDFERIIQQAIKDKDKQKLKEVCQQLEATFIGLMLNEM CCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH RKTIPEDSLTGNSLAKDIFTSMLYDKYAEMLAQNGSFGLADQIYNQLSKKV HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA